Strain Fitness in Sphingobium sp. HT1-2 around GFF3599

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
3,643,309	-		GFF3598	0.66	+0.7
3,643,323	+		GFF3598	0.66	+0.8
3,643,323	+		GFF3598	0.66	+0.2
3,643,333	+		GFF3598	0.67	-0.7
3,643,333	+		GFF3598	0.67	+1.1
3,643,333	+		GFF3598	0.67	-0.9
3,643,365	+		GFF3598	0.68	+1.3
3,643,376	+		GFF3598	0.68	+0.5
3,643,384	-		GFF3598	0.69	+0.8
3,643,384	-		GFF3598	0.69	+0.2
3,643,411	+		GFF3598	0.70	+1.2
3,643,420	+		GFF3598	0.70	-1.9
3,643,471	+		GFF3598	0.72	-0.4
3,643,479	-		GFF3598	0.72	-0.5
3,643,481	+		GFF3598	0.72	-1.7
3,643,489	-		GFF3598	0.72	-0.9
3,643,496	+		GFF3598	0.73	-2.4
3,643,502	+		GFF3598	0.73	+0.6
3,643,510	-		GFF3598	0.73	-0.5
3,643,524	+		GFF3598	0.74	-0.2
3,643,524	+		GFF3598	0.74	-0.0
3,643,532	-		GFF3598	0.74	-0.1
3,643,532	-		GFF3598	0.74	+0.3
3,643,535	+		GFF3598	0.74	+0.0
3,643,535	+		GFF3598	0.74	-0.2
3,643,535	+		GFF3598	0.74	+0.2
3,643,537	+		GFF3598	0.74	-2.2
3,643,537	+		GFF3598	0.74	+0.6
3,643,537	+		GFF3598	0.74	-1.5
3,643,543	-		GFF3598	0.75	+0.3
3,643,545	-		GFF3598	0.75	+1.0
3,643,545	-		GFF3598	0.75	+1.3
3,643,545	-		GFF3598	0.75	-1.4
3,643,545	-		GFF3598	0.75	-1.2
3,643,555	-		GFF3598	0.75	-2.2
3,643,565	-		GFF3598	0.75	+0.1
3,643,565	-		GFF3598	0.75	+0.9
3,643,569	+		GFF3598	0.75	-1.4
3,643,569	+		GFF3598	0.75	-0.4
3,643,569	+		GFF3598	0.75	-0.0
3,643,569	+		GFF3598	0.75	+0.4
3,643,577	-		GFF3598	0.76	-0.6
3,643,577	-		GFF3598	0.76	-0.8
3,643,577	-		GFF3598	0.76	+0.6
3,643,577	-		GFF3598	0.76	+0.8
3,643,577	-		GFF3598	0.76	+1.5
3,643,601	-		GFF3598	0.77	-2.2
3,643,611	-		GFF3598	0.77	-1.6
3,643,618	+		GFF3598	0.77	-1.1
3,643,618	+		GFF3598	0.77	-0.2
3,643,628	+		GFF3598	0.78	-0.2
3,643,628	+		GFF3598	0.78	-1.7
3,643,628	+		GFF3598	0.78	+0.8
3,643,628	+		GFF3598	0.78	-1.2
3,643,628	+		GFF3598	0.78	+1.3
3,643,628	+		GFF3598	0.78	-0.4
3,643,628	+		GFF3598	0.78	+0.5
3,643,628	+		GFF3598	0.78	-1.1
3,643,628	+		GFF3598	0.78	+0.0
3,643,628	+		GFF3598	0.78	+0.7
3,643,628	+		GFF3598	0.78	+0.5
3,643,628	+		GFF3598	0.78	-1.6
3,643,628	+		GFF3598	0.78	-0.0
3,643,628	+		GFF3598	0.78	+1.0
3,643,636	-		GFF3598	0.78	+0.7
3,643,636	-		GFF3598	0.78	-1.2
3,643,636	-		GFF3598	0.78	+0.6
3,643,636	-		GFF3598	0.78	+0.5
3,643,636	-		GFF3598	0.78	-2.0
3,643,636	-		GFF3598	0.78	+1.2
3,643,636	-		GFF3598	0.78	-1.2
3,643,636	-		GFF3598	0.78	-1.3
3,643,636	-		GFF3598	0.78	-1.8
3,643,636	-		GFF3598	0.78	-0.3
3,643,636	-		GFF3598	0.78	-0.2
3,643,636	-		GFF3598	0.78	-0.0
3,643,636	-		GFF3598	0.78	-1.4
3,643,636	-		GFF3598	0.78	-0.5
3,643,636	-		GFF3598	0.78	+0.7
3,643,636	-		GFF3598	0.78	-0.3
3,643,636	-		GFF3598	0.78	-0.4
3,643,637	-		GFF3598	0.78	-0.8
3,643,661	+		GFF3598	0.79	+0.5
3,643,661	+		GFF3598	0.79	+0.8
3,643,663	+		GFF3598	0.79	+0.3
3,643,663	+		GFF3598	0.79	+0.8
3,643,671	-		GFF3598	0.79	-0.4
3,643,716	-		GFF3598	0.81	-1.1
3,643,724	-		GFF3598	0.81	-0.3
3,643,741	+		GFF3598	0.82	-0.9
3,643,748	+		GFF3598	0.82	-0.4
3,643,749	+		GFF3598	0.82	-0.0
3,643,756	-		GFF3598	0.82	-1.2
3,643,757	+		GFF3598	0.83	-0.7
3,643,783	+		GFF3598	0.83	+1.1
3,643,784	+		GFF3598	0.84	+0.6
3,643,789	+		GFF3598	0.84	-0.2
3,643,789	+		GFF3598	0.84	-0.9
3,643,797	-		GFF3598	0.84	-0.0
3,643,800	+		GFF3598	0.84	+0.8
3,643,800	+		GFF3598	0.84	+0.4
3,643,808	-		GFF3598	0.84	-0.4
3,643,808	-		GFF3598	0.84	-1.5
3,643,828	-		GFF3598	0.85	-1.6
3,643,869	+		GFF3598	0.87	+1.0
3,643,877	-		GFF3598	0.87	-0.7
3,643,877	-		GFF3598	0.87	-1.6
3,643,877	-		GFF3598	0.87	+0.6
3,643,880	-		GFF3598	0.87	-1.4
3,643,880	-		GFF3598	0.87	+0.0
3,643,894	+		GFF3598	0.88	+1.5
3,643,902	-		GFF3598	0.88	+0.2
3,643,902	-		GFF3598	0.88	-0.1
3,643,917	+		GFF3598	0.88	-0.2
3,643,922	+		GFF3598	0.89	-1.9
3,643,923	-		GFF3598	0.89	-0.4
3,643,927	+		GFF3598	0.89	-1.3
3,643,935	+		GFF3598	0.89	+0.2
3,643,958	+				-0.2
3,643,963	+				-0.6
3,643,990	-				+0.3
3,643,998	+				+0.3
3,644,006	-				-0.5
3,644,016	-				-0.6
3,644,016	-				-1.2
3,644,021	-				+0.9
3,644,072	+				+1.2
3,644,072	+				-0.8
3,644,072	+				+0.8
3,644,080	-				-0.6
3,644,141	+				-0.2
3,644,142	+				+0.2
3,644,159	-				+0.3
3,644,163	+				-0.0
3,644,163	+				-0.4
3,644,171	-				+0.5
3,644,171	-				-0.6
3,644,171	-				-1.6
3,644,179	+				+0.2
3,644,179	+				+0.1
3,644,179	+				-2.2
3,644,179	+				+1.5
3,644,187	-				-0.4
3,644,187	-				+0.6
3,644,187	-				+0.1
3,644,187	-				-0.7
3,644,187	-				+0.4
3,644,187	-				+0.1
3,644,190	+				-0.6
3,644,190	+				+0.6
3,644,197	-				-0.2
3,644,198	-				-0.0
3,644,226	+				-2.0
3,644,233	-				+1.6
3,644,235	-				-0.8
3,644,280	+				-0.2
3,644,280	-				+1.2
3,644,308	-				+0.1
3,644,345	-				+0.8
3,644,352	+				+1.6
3,644,352	+				+0.8
3,644,360	-				+0.1
3,644,363	+				-0.2
3,644,371	-				+0.7
3,644,376	-		GFF3599	0.10	-0.4
3,644,398	+		GFF3599	0.12	-0.0
3,644,410	-		GFF3599	0.14	+0.7
3,644,471	-		GFF3599	0.19	-0.5
3,644,486	+		GFF3599	0.21	+0.7
3,644,491	+		GFF3599	0.21	-2.2
3,644,494	-		GFF3599	0.21	+0.1
3,644,588	+		GFF3599	0.30	-0.5
3,644,588	+		GFF3599	0.30	-0.4
3,644,588	+		GFF3599	0.30	+0.1
3,644,588	+		GFF3599	0.30	-0.0
3,644,588	+		GFF3599	0.30	-0.0
3,644,596	-		GFF3599	0.31	+1.8
3,644,596	-		GFF3599	0.31	-0.2
3,644,596	-		GFF3599	0.31	-0.1
3,644,598	+		GFF3599	0.31	+0.8
3,644,605	+		GFF3599	0.31	+0.7
3,644,605	+		GFF3599	0.31	+0.2
3,644,613	-		GFF3599	0.32	-1.0
3,644,613	-		GFF3599	0.32	-1.5
3,644,613	-		GFF3599	0.32	+0.5
3,644,613	-		GFF3599	0.32	-0.2
3,644,613	-		GFF3599	0.32	+0.3
3,644,613	-		GFF3599	0.32	-0.7
3,644,621	-		GFF3599	0.33	-0.4
3,644,627	+		GFF3599	0.34	-0.1
3,644,684	+		GFF3599	0.39	+0.6
3,644,690	+		GFF3599	0.39	-1.4
3,644,690	+		GFF3599	0.39	+0.9
3,644,692	-		GFF3599	0.40	+0.3
3,644,693	-		GFF3599	0.40	-2.8
3,644,723	+		GFF3599	0.42	-0.2
3,644,738	-		GFF3599	0.44	+0.3
3,644,800	+		GFF3599	0.49	+0.2
3,644,802	-		GFF3599	0.50	-0.3
3,644,834	+		GFF3599	0.53	-1.0
3,644,842	-		GFF3599	0.53	+0.5
3,644,842	-		GFF3599	0.53	-0.2
3,644,852	-		GFF3599	0.54	+0.2
3,644,852	-		GFF3599	0.54	+0.2
3,644,852	-		GFF3599	0.54	+0.2
3,644,852	-		GFF3599	0.54	-2.1
3,644,861	+		GFF3599	0.55	+1.6
3,644,861	+		GFF3599	0.55	-0.0
3,644,866	+		GFF3599	0.56	+0.1
3,644,866	+		GFF3599	0.56	+0.3
3,644,866	+		GFF3599	0.56	+0.1
3,644,866	+		GFF3599	0.56	+0.5
3,644,869	-		GFF3599	0.56	+1.1
3,644,869	-		GFF3599	0.56	-1.3
3,644,869	-		GFF3599	0.56	-0.7
3,644,874	-		GFF3599	0.56	+0.3
3,644,874	-		GFF3599	0.56	-0.9
3,644,874	-		GFF3599	0.56	+0.5
3,644,929	-		GFF3599	0.61	+0.3
3,644,934	+		GFF3599	0.62	-0.5
3,644,934	-		GFF3599	0.62	+0.7
3,644,934	-		GFF3599	0.62	+0.2
3,644,942	-		GFF3599	0.63	+0.2
3,644,942	-		GFF3599	0.63	+0.8
3,644,944	+		GFF3599	0.63	+1.1
3,644,944	+		GFF3599	0.63	+0.2
3,644,947	-		GFF3599	0.63	-0.4
3,644,947	-		GFF3599	0.63	-0.6
3,644,952	-		GFF3599	0.63	-0.8
3,644,952	-		GFF3599	0.63	-1.8
3,644,961	+		GFF3599	0.64	-0.0
3,644,980	+		GFF3599	0.66	-0.1
3,644,980	+		GFF3599	0.66	+0.3
3,644,980	+		GFF3599	0.66	+0.1
3,644,988	-		GFF3599	0.67	+0.0
3,644,988	-		GFF3599	0.67	+1.7
3,644,988	-		GFF3599	0.67	-0.4
3,644,988	-		GFF3599	0.67	+0.8
3,644,988	-		GFF3599	0.67	-1.6
3,644,988	-		GFF3599	0.67	-0.9
3,644,988	-		GFF3599	0.67	-0.5
3,644,988	-		GFF3599	0.67	+0.9
3,644,988	-		GFF3599	0.67	-0.6
3,645,011	+		GFF3599	0.69	+0.1
3,645,011	+		GFF3599	0.69	+0.2
3,645,011	+		GFF3599	0.69	-0.2
3,645,011	+		GFF3599	0.69	-0.4
3,645,011	+		GFF3599	0.69	-2.4
3,645,011	+		GFF3599	0.69	-0.1
3,645,011	+		GFF3599	0.69	+1.1
3,645,011	+		GFF3599	0.69	-0.6
3,645,011	+		GFF3599	0.69	+0.3
3,645,014	-		GFF3599	0.69	-0.7
3,645,019	-		GFF3599	0.70	-0.9
3,645,019	-		GFF3599	0.70	-0.5
3,645,019	-		GFF3599	0.70	-1.4
3,645,019	-		GFF3599	0.70	-0.2
3,645,019	-		GFF3599	0.70	-0.9
3,645,019	-		GFF3599	0.70	+0.1
3,645,019	-		GFF3599	0.70	+0.5
3,645,019	-		GFF3599	0.70	+0.1
3,645,019	-		GFF3599	0.70	-0.5
3,645,019	-		GFF3599	0.70	-0.5
3,645,019	-		GFF3599	0.70	+0.9
3,645,029	-		GFF3599	0.71	-1.4
3,645,039	+		GFF3599	0.71	-0.4
3,645,063	+		GFF3599	0.74	+0.1
3,645,063	+		GFF3599	0.74	-0.2
3,645,071	-		GFF3599	0.74	+0.2
3,645,071	-		GFF3599	0.74	-1.0
3,645,071	-		GFF3599	0.74	-1.3
3,645,107	-		GFF3599	0.78	-0.7
3,645,135	+		GFF3599	0.80	+1.8
3,645,147	-		GFF3599	0.81	+1.4
3,645,154	+		GFF3599	0.82	+0.4
3,645,154	+		GFF3599	0.82	+0.4
3,645,154	+		GFF3599	0.82	+0.6
3,645,162	-		GFF3599	0.83	-2.4
3,645,162	-		GFF3599	0.83	-0.2
3,645,162	-		GFF3599	0.83	+0.9
3,645,193	-		GFF3599	0.86	-1.0
3,645,208	+		GFF3599	0.87	+0.1
3,645,208	+		GFF3599	0.87	+0.1
3,645,216	-		GFF3599	0.88	-1.8
3,645,233	+		GFF3599	0.89	-0.7
3,645,233	+		GFF3599	0.89	+0.3
3,645,233	+		GFF3599	0.89	-1.7
3,645,233	+		GFF3599	0.89	+0.9
3,645,233	+		GFF3599	0.89	-1.1
3,645,233	+		GFF3599	0.89	-0.5
3,645,233	+		GFF3599	0.89	+1.1
3,645,241	-				-1.1
3,645,241	-				+1.2
3,645,241	-				-1.7
3,645,241	-				-2.0
3,645,241	-				-0.7
3,645,241	-				+0.1
3,645,241	-				+0.4
3,645,241	-				-0.0
3,645,241	-				-0.7
3,645,241	-				-0.3
3,645,265	+				-1.0
3,645,265	+				+0.5
3,645,265	+				-0.0
3,645,265	+				+1.6
3,645,265	+				+1.2
3,645,266	+				-0.9
3,645,270	+				-0.8
3,645,273	-				+0.3
3,645,273	-				-1.1
3,645,273	-				-1.0
3,645,278	-				-0.5
3,645,278	-				-1.6
3,645,278	-				-1.2
3,645,284	+				-1.6
3,645,284	+				-1.2
3,645,284	+				-0.6
3,645,292	-				-0.4
3,645,292	-				-0.4
3,645,294	+				-0.5
3,645,307	-				-0.6
3,645,328	+				-1.9
3,645,336	-				+0.9
3,645,350	+				-0.0