Strain Fitness in Sphingobium sp. HT1-2 around GFF2590

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,605,492	-		GFF2589	0.37	-0.1
2,605,519	+		GFF2589	0.38	-0.8
2,605,524	+		GFF2589	0.39	+0.1
2,605,527	-		GFF2589	0.39	-1.0
2,605,527	-		GFF2589	0.39	+0.5
2,605,532	-		GFF2589	0.39	+0.4
2,605,532	-		GFF2589	0.39	+1.1
2,605,536	+		GFF2589	0.39	+0.3
2,605,536	+		GFF2589	0.39	-0.4
2,605,543	+		GFF2589	0.40	-2.6
2,605,544	-		GFF2589	0.40	-0.4
2,605,544	-		GFF2589	0.40	-0.6
2,605,550	+		GFF2589	0.40	+0.3
2,605,558	-		GFF2589	0.41	-0.6
2,605,568	-		GFF2589	0.41	+0.2
2,605,571	+		GFF2589	0.42	-0.2
2,605,571	+		GFF2589	0.42	-0.9
2,605,571	+		GFF2589	0.42	+0.4
2,605,579	-		GFF2589	0.42	-1.0
2,605,593	+		GFF2589	0.43	-2.0
2,605,646	+		GFF2589	0.46	-1.5
2,605,654	-		GFF2589	0.47	-0.5
2,605,656	+		GFF2589	0.47	-2.5
2,605,656	+		GFF2589	0.47	+1.3
2,605,664	-		GFF2589	0.47	-0.4
2,605,666	+		GFF2589	0.48	-2.0
2,605,697	+		GFF2589	0.49	-0.8
2,605,697	+		GFF2589	0.49	+0.0
2,605,705	-		GFF2589	0.50	-0.2
2,605,726	-		GFF2589	0.51	+0.5
2,605,727	+		GFF2589	0.51	-0.0
2,605,731	+		GFF2589	0.52	-1.9
2,605,731	-		GFF2589	0.52	-0.3
2,605,739	-		GFF2589	0.52	-0.2
2,605,762	+		GFF2589	0.54	+0.9
2,605,770	-		GFF2589	0.54	-1.9
2,605,770	-		GFF2589	0.54	+0.1
2,605,782	-		GFF2589	0.55	-0.8
2,605,782	-		GFF2589	0.55	-0.3
2,605,804	+		GFF2589	0.56	-1.8
2,605,809	+		GFF2589	0.57	-1.9
2,605,809	+		GFF2589	0.57	-0.5
2,605,809	+		GFF2589	0.57	-0.6
2,605,809	+		GFF2589	0.57	+1.4
2,605,809	+		GFF2589	0.57	+0.2
2,605,809	+		GFF2589	0.57	-1.0
2,605,809	+		GFF2589	0.57	-1.7
2,605,809	+		GFF2589	0.57	+0.8
2,605,809	+		GFF2589	0.57	+0.1
2,605,812	-		GFF2589	0.57	+1.8
2,605,812	-		GFF2589	0.57	-0.7
2,605,812	-		GFF2589	0.57	-1.4
2,605,812	-		GFF2589	0.57	+0.3
2,605,812	-		GFF2589	0.57	-0.5
2,605,812	-		GFF2589	0.57	-0.2
2,605,817	-		GFF2589	0.57	-0.0
2,605,817	-		GFF2589	0.57	-0.4
2,605,817	-		GFF2589	0.57	+0.7
2,605,817	-		GFF2589	0.57	-0.1
2,605,817	-		GFF2589	0.57	-0.2
2,605,817	-		GFF2589	0.57	-0.1
2,605,817	-		GFF2589	0.57	+1.8
2,605,817	-		GFF2589	0.57	+0.6
2,605,817	-		GFF2589	0.57	-1.1
2,605,817	-		GFF2589	0.57	+0.3
2,605,822	-		GFF2589	0.57	+0.3
2,605,842	+		GFF2589	0.59	+0.7
2,605,845	-		GFF2589	0.59	+0.7
2,605,847	+		GFF2589	0.59	+0.7
2,605,847	+		GFF2589	0.59	-0.7
2,605,850	-		GFF2589	0.59	+0.2
2,605,852	+		GFF2589	0.59	-0.1
2,605,860	-		GFF2589	0.60	+0.8
2,605,861	-		GFF2589	0.60	-1.2
2,605,897	+		GFF2589	0.62	+1.3
2,605,900	-		GFF2589	0.62	-2.3
2,605,902	+		GFF2589	0.62	-1.9
2,605,902	+		GFF2589	0.62	-0.5
2,605,910	-		GFF2589	0.63	-0.6
2,605,915	-		GFF2589	0.63	-0.1
2,605,957	+		GFF2589	0.66	+0.5
2,605,957	+		GFF2589	0.66	+0.2
2,605,982	+		GFF2589	0.68	-1.2
2,605,985	-		GFF2589	0.68	-0.6
2,606,012	+		GFF2589	0.69	-0.4
2,606,020	-		GFF2589	0.70	+0.0
2,606,026	-		GFF2589	0.70	+0.2
2,606,026	-		GFF2589	0.70	-0.2
2,606,027	+		GFF2589	0.70	+0.3
2,606,032	+		GFF2589	0.71	+0.5
2,606,035	-		GFF2589	0.71	-0.9
2,606,037	+		GFF2589	0.71	-0.9
2,606,048	+		GFF2589	0.72	-0.1
2,606,056	-		GFF2589	0.72	+1.3
2,606,058	+		GFF2589	0.72	+1.6
2,606,066	-		GFF2589	0.73	-0.5
2,606,066	-		GFF2589	0.73	-1.5
2,606,066	-		GFF2589	0.73	-0.8
2,606,066	-		GFF2589	0.73	+0.2
2,606,087	-		GFF2589	0.74	-0.5
2,606,089	+		GFF2589	0.74	-1.1
2,606,091	+		GFF2589	0.74	+1.2
2,606,097	-		GFF2589	0.75	+0.5
2,606,109	-		GFF2589	0.76	-0.1
2,606,110	-		GFF2589	0.76	-1.4
2,606,134	-		GFF2589	0.77	-0.2
2,606,157	+		GFF2589	0.79	+1.0
2,606,157	+		GFF2589	0.79	-0.7
2,606,157	+		GFF2589	0.79	-2.2
2,606,157	+		GFF2589	0.79	-0.2
2,606,157	+		GFF2589	0.79	-0.1
2,606,165	-		GFF2589	0.79	-1.4
2,606,165	-		GFF2589	0.79	-0.4
2,606,165	-		GFF2589	0.79	-0.2
2,606,165	-		GFF2589	0.79	-1.1
2,606,165	-		GFF2589	0.79	-1.6
2,606,174	+		GFF2589	0.80	-0.5
2,606,177	-		GFF2589	0.80	-1.1
2,606,205	+		GFF2589	0.82	-0.1
2,606,221	-		GFF2589	0.83	-0.3
2,606,231	-		GFF2589	0.83	-2.4
2,606,245	-		GFF2589	0.84	+0.3
2,606,279	+		GFF2589	0.86	-1.1
2,606,279	+		GFF2589	0.86	-2.1
2,606,279	+		GFF2589	0.86	-1.0
2,606,287	-		GFF2589	0.87	-0.4
2,606,287	-		GFF2589	0.87	+0.1
2,606,287	-		GFF2589	0.87	-0.2
2,606,291	+		GFF2589	0.87	+0.3
2,606,298	-		GFF2589	0.88	+1.5
2,606,302	+		GFF2589	0.88	+0.4
2,606,316	+		GFF2589	0.89	-0.4
2,606,390	+				-2.3
2,606,396	-				-0.8
2,606,398	-				+0.7
2,606,398	-				-0.5
2,606,401	-				-1.4
2,606,418	+				-2.0
2,606,444	+				+0.2
2,606,474	+				-0.4
2,606,482	-				-0.2
2,606,512	+				-1.4
2,606,513	+				-0.7
2,606,515	-				+0.7
2,606,521	-				-0.4
2,606,521	-				+0.6
2,606,550	+				-1.1
2,606,594	-		GFF2590	0.11	+0.7
2,606,609	+		GFF2590	0.12	+0.1
2,606,625	+		GFF2590	0.14	-0.1
2,606,625	+		GFF2590	0.14	+0.6
2,606,625	+		GFF2590	0.14	+0.1
2,606,628	-		GFF2590	0.14	-1.4
2,606,631	+		GFF2590	0.14	-0.4
2,606,633	-		GFF2590	0.15	-2.5
2,606,634	-		GFF2590	0.15	+0.3
2,606,641	+		GFF2590	0.15	+0.2
2,606,641	+		GFF2590	0.15	-0.9
2,606,649	-		GFF2590	0.16	-1.1
2,606,670	+		GFF2590	0.18	-0.9
2,606,670	+		GFF2590	0.18	+0.3
2,606,673	+		GFF2590	0.19	+0.6
2,606,675	+		GFF2590	0.19	+0.7
2,606,675	+		GFF2590	0.19	-1.9
2,606,683	-		GFF2590	0.20	+0.2
2,606,683	-		GFF2590	0.20	+0.0
2,606,693	+		GFF2590	0.21	+1.1
2,606,704	-		GFF2590	0.22	-0.3
2,606,704	-		GFF2590	0.22	+0.1
2,606,707	+		GFF2590	0.22	-0.4
2,606,722	-		GFF2590	0.24	-1.8
2,606,745	+		GFF2590	0.26	+1.8
2,606,748	-		GFF2590	0.26	-0.2
2,606,753	-		GFF2590	0.27	-0.2
2,606,754	-		GFF2590	0.27	-0.5
2,606,754	-		GFF2590	0.27	+0.1
2,606,762	-		GFF2590	0.28	+0.6
2,606,763	-		GFF2590	0.28	+0.6
2,606,766	+		GFF2590	0.28	-1.3
2,606,766	+		GFF2590	0.28	-0.3
2,606,766	+		GFF2590	0.28	-0.2
2,606,766	+		GFF2590	0.28	-0.1
2,606,772	-		GFF2590	0.29	-0.1
2,606,774	-		GFF2590	0.29	-0.5
2,606,774	-		GFF2590	0.29	-1.9
2,606,774	-		GFF2590	0.29	-0.6
2,606,794	-		GFF2590	0.31	-0.1
2,606,832	+		GFF2590	0.35	-1.6
2,606,842	-		GFF2590	0.36	-0.2
2,606,852	+		GFF2590	0.37	+0.3
2,606,852	+		GFF2590	0.37	-0.5
2,606,885	+		GFF2590	0.40	+0.0
2,606,885	+		GFF2590	0.40	+0.3
2,606,885	+		GFF2590	0.40	+0.4
2,606,886	+		GFF2590	0.40	-1.4
2,606,893	-		GFF2590	0.41	+0.4
2,606,893	-		GFF2590	0.41	+0.5
2,606,894	+		GFF2590	0.41	-0.5
2,606,902	-		GFF2590	0.42	-0.9
2,606,911	+		GFF2590	0.43	+0.3
2,606,911	+		GFF2590	0.43	+1.2
2,606,911	+		GFF2590	0.43	-0.8
2,606,911	+		GFF2590	0.43	-0.1
2,606,921	+		GFF2590	0.44	-1.5
2,606,923	-		GFF2590	0.44	+0.6
2,606,931	+		GFF2590	0.45	+0.5
2,606,931	+		GFF2590	0.45	+1.1
2,606,931	+		GFF2590	0.45	+1.1
2,606,931	+		GFF2590	0.45	+0.1
2,606,936	+		GFF2590	0.45	+0.3
2,606,936	+		GFF2590	0.45	-1.3
2,606,936	+		GFF2590	0.45	+0.1
2,606,936	+		GFF2590	0.45	+0.6
2,606,936	+		GFF2590	0.45	-0.2
2,606,939	-		GFF2590	0.46	-0.6
2,606,944	-		GFF2590	0.46	+0.1
2,606,944	-		GFF2590	0.46	-0.2
2,606,944	-		GFF2590	0.46	-0.3
2,606,954	-		GFF2590	0.47	+0.1
2,606,968	+		GFF2590	0.49	+0.0
2,606,976	-		GFF2590	0.50	+1.0
2,606,992	+		GFF2590	0.51	+0.2
2,607,027	+		GFF2590	0.55	+0.6
2,607,035	-		GFF2590	0.56	+1.1
2,607,068	-		GFF2590	0.59	+0.1
2,607,100	+		GFF2590	0.62	-0.4
2,607,100	+		GFF2590	0.62	+0.8
2,607,101	+		GFF2590	0.62	-0.6
2,607,108	-		GFF2590	0.63	+0.5
2,607,108	-		GFF2590	0.63	-2.0
2,607,118	-		GFF2590	0.64	-1.5
2,607,127	+		GFF2590	0.65	-0.4
2,607,127	+		GFF2590	0.65	-0.6
2,607,127	+		GFF2590	0.65	-0.6
2,607,127	+		GFF2590	0.65	-0.2
2,607,127	+		GFF2590	0.65	+0.1
2,607,127	+		GFF2590	0.65	+1.0
2,607,127	+		GFF2590	0.65	-1.4
2,607,135	-		GFF2590	0.66	-1.5
2,607,135	-		GFF2590	0.66	-1.1
2,607,135	-		GFF2590	0.66	-0.8
2,607,169	+		GFF2590	0.69	+1.3
2,607,177	-		GFF2590	0.70	-0.0
2,607,185	+		GFF2590	0.71	-1.8
2,607,192	+		GFF2590	0.72	+0.2
2,607,225	+		GFF2590	0.75	+0.6
2,607,230	+		GFF2590	0.75	-1.3
2,607,230	+		GFF2590	0.75	-1.8
2,607,238	-		GFF2590	0.76	+0.5
2,607,285	+		GFF2590	0.81	-3.0
2,607,328	+		GFF2590	0.85	-1.5
2,607,328	+		GFF2590	0.85	+0.2
2,607,328	+		GFF2590	0.85	-0.1
2,607,328	+		GFF2590	0.85	+0.3
2,607,328	+		GFF2590	0.85	-1.2
2,607,338	+		GFF2590	0.86	-0.0
2,607,346	-		GFF2590	0.87	-0.2
2,607,351	+		GFF2590	0.88	-1.7
2,607,367	+		GFF2590	0.89	+0.8
2,607,377	+				-0.8
2,607,377	+				+1.3
2,607,389	+				+0.0
2,607,390	+				-1.6
2,607,396	+				-0.8
2,607,396	-				-0.2
2,607,397	+				+0.2
2,607,397	+				+0.6
2,607,403	-				+0.8
2,607,403	-				-1.3
2,607,403	-				-0.1
2,607,404	-				+0.1
2,607,415	+				+0.4
2,607,419	-				+0.2
2,607,420	+				+0.4
2,607,420	+				-2.5
2,607,420	+				-0.2
2,607,420	+				-2.0
2,607,420	+				-1.7
2,607,420	+				-0.6
2,607,420	+				-0.3
2,607,428	-				+0.4
2,607,428	-				-0.5
2,607,428	-				-0.0
2,607,428	-				-0.1
2,607,428	-				+0.9
2,607,428	-				-0.3
2,607,428	-				-0.2
2,607,443	+				+0.3
2,607,443	+				-1.4
2,607,443	+				-0.5
2,607,443	-				-0.3
2,607,449	+				-0.5
2,607,449	+				-0.5
2,607,452	-				+0.6
2,607,463	-				-0.4
2,607,472	+				-1.8
2,607,475	-				-0.8
2,607,480	-				+0.4
2,607,486	+				-1.1
2,607,491	+				-2.5
2,607,494	-				+0.5
2,607,504	-				-0.9
2,607,504	-				+0.4
2,607,518	+				-0.4
2,607,540	-				-0.1
2,607,546	+				+0.1
2,607,546	+				+0.5
2,607,554	-				+0.6
2,607,583	+		GFF2591	0.13	+0.3
2,607,583	+		GFF2591	0.13	+1.0
2,607,583	+		GFF2591	0.13	-2.3
2,607,583	+		GFF2591	0.13	-1.7
2,607,585	+		GFF2591	0.13	+0.4
2,607,585	+		GFF2591	0.13	+0.2
2,607,590	+		GFF2591	0.13	+0.3
2,607,591	-		GFF2591	0.13	+0.4
2,607,591	-		GFF2591	0.13	-2.2
2,607,591	-		GFF2591	0.13	+0.0
2,607,591	-		GFF2591	0.13	-1.4
2,607,591	-		GFF2591	0.13	-0.2
2,607,591	-		GFF2591	0.13	-2.1
2,607,591	-		GFF2591	0.13	-0.9
2,607,593	+		GFF2591	0.14	-1.5
2,607,593	-		GFF2591	0.14	-0.7
2,607,598	+		GFF2591	0.14	+0.3
2,607,598	+		GFF2591	0.14	+0.6
2,607,603	+		GFF2591	0.15	-0.1
2,607,603	+		GFF2591	0.15	-0.8
2,607,606	-		GFF2591	0.15	+0.5
2,607,648	+		GFF2591	0.20	-1.0
2,607,648	+		GFF2591	0.20	+0.7
2,607,648	+		GFF2591	0.20	+0.1
2,607,648	+		GFF2591	0.20	+0.4
2,607,656	-		GFF2591	0.20	-0.4
2,607,656	-		GFF2591	0.20	-0.1
2,607,658	+		GFF2591	0.21	-0.4
2,607,673	+		GFF2591	0.22	+0.3
2,607,676	-		GFF2591	0.23	+0.5
2,607,696	+		GFF2591	0.25	-0.5
2,607,697	+		GFF2591	0.25	+0.4
2,607,704	-		GFF2591	0.26	-2.1
2,607,727	-		GFF2591	0.28	-0.4
2,607,741	+		GFF2591	0.30	-2.3
2,607,749	-		GFF2591	0.31	-0.9
2,607,773	+		GFF2591	0.33	-0.4
2,607,777	-		GFF2591	0.34	-0.1
2,607,778	+		GFF2591	0.34	+0.5
2,607,778	+		GFF2591	0.34	+0.1
2,607,778	+		GFF2591	0.34	-0.1
2,607,778	+		GFF2591	0.34	-0.6
2,607,778	+		GFF2591	0.34	+0.5
2,607,778	+		GFF2591	0.34	-0.3
2,607,778	+		GFF2591	0.34	-1.4
2,607,786	-		GFF2591	0.35	+1.3
2,607,786	-		GFF2591	0.35	+0.0
2,607,786	-		GFF2591	0.35	-1.7
2,607,786	-		GFF2591	0.35	-0.3
2,607,786	-		GFF2591	0.35	-1.7
2,607,786	-		GFF2591	0.35	+0.7
2,607,786	-		GFF2591	0.35	+0.6
2,607,786	-		GFF2591	0.35	-0.7
2,607,792	+		GFF2591	0.35	+1.1
2,607,792	+		GFF2591	0.35	-2.7
2,607,792	-		GFF2591	0.35	+0.8
2,607,792	-		GFF2591	0.35	-0.6
2,607,792	-		GFF2591	0.35	-0.1
2,607,792	-		GFF2591	0.35	-0.4
2,607,792	-		GFF2591	0.35	+0.1
2,607,800	+		GFF2591	0.36	-1.5
2,607,800	+		GFF2591	0.36	-1.1
2,607,800	-		GFF2591	0.36	+0.5
2,607,809	+		GFF2591	0.37	+0.8
2,607,838	+		GFF2591	0.40	+0.7
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2,607,850	+		GFF2591	0.41	+0.9
2,607,850	+		GFF2591	0.41	-0.1
2,607,850	+		GFF2591	0.41	+1.0
2,607,850	+		GFF2591	0.41	-0.0
2,607,851	+		GFF2591	0.42	-1.2
2,607,851	-		GFF2591	0.42	-0.4
2,607,852	-		GFF2591	0.42	-1.7
2,607,858	-		GFF2591	0.42	-0.1
2,607,882	+		GFF2591	0.45	-1.0
2,607,890	-		GFF2591	0.46	+1.0
2,607,913	-		GFF2591	0.48	+0.4
2,607,922	+		GFF2591	0.49	-0.8
2,607,928	+		GFF2591	0.50	-0.6
2,607,929	+		GFF2591	0.50	-1.3
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2,607,936	-		GFF2591	0.51	-1.4
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2,607,951	+		GFF2591	0.52	+0.1
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2,607,959	-		GFF2591	0.53	-0.1
2,607,975	+		GFF2591	0.55	+1.6
2,608,024	+		GFF2591	0.60	+1.2
2,608,032	-		GFF2591	0.61	-2.0
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2,608,071	+		GFF2591	0.65	-2.0
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2,608,071	+		GFF2591	0.65	-3.6
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2,608,079	-		GFF2591	0.66	-0.4
2,608,084	-		GFF2591	0.67	-0.4
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2,608,118	+		GFF2591	0.70	-1.7
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2,608,118	+		GFF2591	0.70	-0.2
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2,608,148	+		GFF2591	0.74	+0.0
2,608,171	-		GFF2591	0.76	-1.7
2,608,186	+		GFF2591	0.78	+0.4
2,608,186	+		GFF2591	0.78	-2.0
2,608,187	+		GFF2591	0.78	-1.0
2,608,219	+		GFF2591	0.81	-1.9
2,608,229	+		GFF2591	0.82	+0.7
2,608,237	-		GFF2591	0.83	-0.4
2,608,237	-		GFF2591	0.83	-0.8
2,608,278	+		GFF2591	0.88	-0.2
2,608,284	+		GFF2591	0.88	-0.4
2,608,302	-				-0.2
2,608,338	-				-0.7
2,608,360	+				+0.2
2,608,360	+				+0.6
2,608,360	+				-0.4
2,608,368	-				+0.7
2,608,459	-				-0.9
2,608,460	-				-1.5