Strain Fitness in Sphingobium sp. HT1-2 around GFF2568

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,583,147	+				-0.0
2,583,155	-				-2.0
2,583,155	-				-2.1
2,583,160	-				-1.3
2,583,187	-				-1.2
2,583,189	-				+0.7
2,583,191	-				-1.4
2,583,208	-				-0.0
2,583,235	+				-0.9
2,583,245	+				-0.2
2,583,264	+				+1.3
2,583,264	+				-0.0
2,583,269	+				+0.4
2,583,269	+				-1.9
2,583,272	-				-0.4
2,583,272	-				+0.5
2,583,272	-				-0.5
2,583,272	-				+0.6
2,583,277	-				+0.2
2,583,277	-				+0.8
2,583,277	-				-0.9
2,583,282	-				-0.7
2,583,320	+				-0.4
2,583,328	-				+1.6
2,583,343	+				-0.2
2,583,343	+				-2.5
2,583,343	+				+0.6
2,583,345	+				+0.3
2,583,345	+				-0.0
2,583,345	+				-0.1
2,583,345	+				-0.3
2,583,345	+				-2.1
2,583,345	+				-1.2
2,583,345	+				+0.9
2,583,345	+				-0.6
2,583,345	+				-0.7
2,583,345	+				-1.8
2,583,345	+				-0.2
2,583,349	+		GFF2567	0.10	+0.5
2,583,351	-		GFF2567	0.10	-0.9
2,583,351	-		GFF2567	0.10	-0.9
2,583,353	-		GFF2567	0.11	+1.9
2,583,353	-		GFF2567	0.11	-0.1
2,583,353	-		GFF2567	0.11	-1.1
2,583,353	-		GFF2567	0.11	-0.4
2,583,353	-		GFF2567	0.11	+0.3
2,583,353	-		GFF2567	0.11	-0.2
2,583,353	-		GFF2567	0.11	+0.4
2,583,353	-		GFF2567	0.11	+0.3
2,583,353	-		GFF2567	0.11	-0.5
2,583,353	-		GFF2567	0.11	+0.3
2,583,353	-		GFF2567	0.11	+0.4
2,583,353	-		GFF2567	0.11	+1.8
2,583,353	-		GFF2567	0.11	-0.2
2,583,353	-		GFF2567	0.11	-0.5
2,583,353	-		GFF2567	0.11	-1.6
2,583,355	+		GFF2567	0.11	+0.0
2,583,363	-		GFF2567	0.12	+1.5
2,583,363	-		GFF2567	0.12	-0.7
2,583,397	-		GFF2567	0.16	+0.2
2,583,399	+		GFF2567	0.16	+0.5
2,583,407	-		GFF2567	0.17	+0.4
2,583,407	-		GFF2567	0.17	+0.1
2,583,425	+		GFF2567	0.19	-0.5
2,583,431	+		GFF2567	0.20	-1.6
2,583,433	-		GFF2567	0.20	+0.3
2,583,448	-		GFF2567	0.22	-1.4
2,583,449	+		GFF2567	0.22	-0.1
2,583,459	+		GFF2567	0.23	-0.2
2,583,459	+		GFF2567	0.23	-2.7
2,583,459	+		GFF2567	0.23	+0.6
2,583,463	+		GFF2567	0.23	-0.2
2,583,468	+		GFF2567	0.24	+0.1
2,583,468	+		GFF2567	0.24	-2.0
2,583,471	-		GFF2567	0.24	-0.8
2,583,472	-		GFF2567	0.24	-0.2
2,583,498	-		GFF2567	0.27	-0.8
2,583,500	+		GFF2567	0.28	-0.1
2,583,500	+		GFF2567	0.28	+0.8
2,583,500	+		GFF2567	0.28	+1.4
2,583,500	+		GFF2567	0.28	-1.2
2,583,500	+		GFF2567	0.28	+0.3
2,583,500	+		GFF2567	0.28	+0.6
2,583,500	+		GFF2567	0.28	-0.6
2,583,500	+		GFF2567	0.28	+0.1
2,583,500	+		GFF2567	0.28	+0.8
2,583,508	-		GFF2567	0.29	+0.5
2,583,508	-		GFF2567	0.29	+0.3
2,583,508	-		GFF2567	0.29	-2.2
2,583,508	-		GFF2567	0.29	+0.3
2,583,508	-		GFF2567	0.29	+0.5
2,583,508	-		GFF2567	0.29	+0.3
2,583,508	-		GFF2567	0.29	-1.1
2,583,508	-		GFF2567	0.29	-1.9
2,583,513	-		GFF2567	0.29	-0.9
2,583,529	-		GFF2567	0.31	-2.0
2,583,530	+		GFF2567	0.31	+0.3
2,583,567	+		GFF2567	0.35	+0.2
2,583,573	+		GFF2567	0.36	-1.8
2,583,575	-		GFF2567	0.36	-1.8
2,583,581	-		GFF2567	0.37	-0.5
2,583,606	+		GFF2567	0.40	+2.1
2,583,613	+		GFF2567	0.41	-0.6
2,583,613	-		GFF2567	0.41	-0.6
2,583,676	-		GFF2567	0.48	-1.4
2,583,707	-		GFF2567	0.52	-0.9
2,583,724	+		GFF2567	0.54	-0.3
2,583,733	+		GFF2567	0.55	-0.8
2,583,733	+		GFF2567	0.55	-0.4
2,583,741	-		GFF2567	0.55	-1.3
2,583,790	-		GFF2567	0.61	-1.8
2,583,825	+		GFF2567	0.65	-2.3
2,583,850	-		GFF2567	0.68	-1.9
2,583,920	+		GFF2567	0.76	-0.0
2,583,938	+		GFF2567	0.78	-0.4
2,583,938	+		GFF2567	0.78	-0.4
2,583,938	+		GFF2567	0.78	+1.3
2,583,946	-		GFF2567	0.79	+0.9
2,583,946	-		GFF2567	0.79	-1.7
2,583,946	-		GFF2567	0.79	+0.3
2,583,980	+		GFF2567	0.83	-0.2
2,583,985	+		GFF2567	0.84	+0.6
2,583,985	+		GFF2567	0.84	+0.6
2,583,985	+		GFF2567	0.84	-0.8
2,583,988	-		GFF2567	0.84	-2.6
2,583,988	-		GFF2567	0.84	+0.3
2,583,993	-		GFF2567	0.85	-0.9
2,583,993	-		GFF2567	0.85	-0.0
2,583,993	-		GFF2567	0.85	-0.3
2,583,993	-		GFF2567	0.85	-0.6
2,584,006	-		GFF2567	0.86	-0.3
2,584,023	+		GFF2567	0.88	-0.1
2,584,047	+				-0.7
2,584,047	+				+0.3
2,584,055	-				-0.8
2,584,055	-				-0.5
2,584,056	+				+1.0
2,584,056	+				+1.7
2,584,094	-				-0.3
2,584,099	-				-1.6
2,584,112	+				+1.1
2,584,128	+				-1.2
2,584,138	+				+0.7
2,584,138	+				-0.2
2,584,138	+				+0.0
2,584,141	-				+0.2
2,584,141	-				+0.2
2,584,145	+				+0.2
2,584,146	-				-1.6
2,584,146	-				-0.7
2,584,162	-				+0.6
2,584,162	-				+0.8
2,584,162	-				-0.6
2,584,181	-				-2.5
2,584,186	-				-0.6
2,584,211	+				-2.0
2,584,211	+				-0.3
2,584,211	+				+0.1
2,584,211	+				-0.9
2,584,211	+				+0.4
2,584,211	+				+0.4
2,584,211	+				-1.0
2,584,211	+				+0.7
2,584,211	+				-1.3
2,584,211	+				+0.2
2,584,211	+				+0.2
2,584,219	-		GFF2568	0.10	-0.4
2,584,219	-		GFF2568	0.10	-0.4
2,584,219	-		GFF2568	0.10	-1.4
2,584,219	-		GFF2568	0.10	-0.6
2,584,219	-		GFF2568	0.10	-0.8
2,584,219	-		GFF2568	0.10	+0.5
2,584,219	-		GFF2568	0.10	-2.2
2,584,219	-		GFF2568	0.10	-0.8
2,584,219	-		GFF2568	0.10	-1.5
2,584,219	-		GFF2568	0.10	+0.1
2,584,219	-		GFF2568	0.10	-0.0
2,584,221	-		GFF2568	0.11	+0.7
2,584,225	+		GFF2568	0.11	-0.5
2,584,306	+		GFF2568	0.20	+0.2
2,584,308	-		GFF2568	0.20	-0.4
2,584,316	+		GFF2568	0.21	+0.1
2,584,319	-		GFF2568	0.21	-1.7
2,584,324	-		GFF2568	0.22	-1.8
2,584,338	+		GFF2568	0.23	-0.4
2,584,343	-		GFF2568	0.24	-0.7
2,584,353	+		GFF2568	0.25	-1.0
2,584,353	+		GFF2568	0.25	-1.1
2,584,353	+		GFF2568	0.25	-0.4
2,584,361	-		GFF2568	0.26	+0.6
2,584,367	+		GFF2568	0.27	-1.8
2,584,375	-		GFF2568	0.28	+0.6
2,584,382	+		GFF2568	0.28	+1.3
2,584,390	+		GFF2568	0.29	-2.3
2,584,392	+		GFF2568	0.29	-0.7
2,584,420	+		GFF2568	0.32	-1.7
2,584,420	+		GFF2568	0.32	-1.3
2,584,428	-		GFF2568	0.33	-1.8
2,584,459	+		GFF2568	0.37	-0.4
2,584,496	+		GFF2568	0.41	-0.4
2,584,502	+		GFF2568	0.41	-0.1
2,584,504	-		GFF2568	0.42	-0.3
2,584,510	-		GFF2568	0.42	-0.4
2,584,519	+		GFF2568	0.43	+0.6
2,584,552	+		GFF2568	0.47	-0.9
2,584,637	+		GFF2568	0.56	-0.6
2,584,642	+		GFF2568	0.57	-1.5
2,584,643	+		GFF2568	0.57	-0.3
2,584,645	-		GFF2568	0.57	-0.8
2,584,649	+		GFF2568	0.57	+0.4
2,584,658	-		GFF2568	0.58	-0.3
2,584,716	-		GFF2568	0.65	+0.3
2,584,716	-		GFF2568	0.65	+0.2
2,584,716	-		GFF2568	0.65	-1.2
2,584,717	+		GFF2568	0.65	-2.3
2,584,725	-		GFF2568	0.66	-1.1
2,584,727	-		GFF2568	0.66	-0.5
2,584,738	+		GFF2568	0.67	-0.7
2,584,774	-		GFF2568	0.71	-1.8
2,584,784	-		GFF2568	0.72	+0.2
2,584,802	-		GFF2568	0.74	-1.1
2,584,820	+		GFF2568	0.76	-2.4
2,584,820	+		GFF2568	0.76	+0.4
2,584,820	+		GFF2568	0.76	-0.1
2,584,820	+		GFF2568	0.76	+1.0
2,584,838	-		GFF2568	0.78	-1.9
2,584,861	-		GFF2568	0.81	-0.9
2,584,866	-		GFF2568	0.81	+1.3
2,584,866	-		GFF2568	0.81	-0.4
2,584,888	+		GFF2568	0.84	+0.4
2,584,888	+		GFF2568	0.84	-0.2
2,584,893	+		GFF2568	0.84	-1.5
2,584,914	-		GFF2568	0.86	+0.2
2,584,936	-		GFF2568	0.89	-0.3
2,584,946	-				-0.4
2,584,946	-				+0.9
2,584,963	+				-0.6
2,584,969	-				-2.9
2,584,979	-				-0.6
2,585,012	+				-0.5
2,585,015	-				-0.7
2,585,020	-				-1.5
2,585,020	-				-1.9
2,585,039	-				+0.7
2,585,053	+				-0.8
2,585,053	+				-2.1
2,585,053	+				-0.6
2,585,063	+				+0.5
2,585,063	+				-0.4
2,585,063	+				+0.2
2,585,063	+				-0.1
2,585,063	+				-0.7
2,585,063	+				+0.6
2,585,063	+				-1.9
2,585,068	+				+1.1
2,585,071	-				-0.2
2,585,071	-				-0.0
2,585,071	-				-0.2
2,585,071	-				-0.2
2,585,071	-				+0.1
2,585,071	-				-0.5
2,585,071	-				+0.6
2,585,074	+				+0.5
2,585,074	+				-1.0
2,585,082	-				-0.8
2,585,086	+				+0.1
2,585,086	+				-0.8
2,585,086	+				+0.1
2,585,086	+				+0.6
2,585,086	+				-0.2
2,585,086	+				+0.2
2,585,086	+				-0.1
2,585,086	+				-1.0
2,585,086	+				+0.9
2,585,086	+				-1.2
2,585,086	+				+0.2
2,585,091	+				-0.3
2,585,094	-		GFF2569	0.10	-1.8
2,585,094	-		GFF2569	0.10	-1.4
2,585,094	-		GFF2569	0.10	+1.6
2,585,094	-		GFF2569	0.10	-0.8
2,585,094	-		GFF2569	0.10	+0.1
2,585,094	-		GFF2569	0.10	-0.5
2,585,094	-		GFF2569	0.10	-0.6
2,585,094	-		GFF2569	0.10	-1.4
2,585,097	-		GFF2569	0.11	+0.2
2,585,107	+		GFF2569	0.13	-0.8
2,585,107	+		GFF2569	0.13	-0.3
2,585,107	+		GFF2569	0.13	-0.4
2,585,109	+		GFF2569	0.13	-0.8
2,585,128	+		GFF2569	0.16	-2.2
2,585,152	+		GFF2569	0.20	-0.5
2,585,154	+		GFF2569	0.21	+0.8
2,585,157	+		GFF2569	0.21	-0.4
2,585,165	-		GFF2569	0.23	-0.2
2,585,189	-		GFF2569	0.27	-0.4
2,585,190	+		GFF2569	0.27	-1.2
2,585,193	+		GFF2569	0.28	+0.8
2,585,201	-		GFF2569	0.29	-0.9
2,585,216	-		GFF2569	0.32	+0.6
2,585,221	+		GFF2569	0.32	-0.4
2,585,235	-		GFF2569	0.35	-2.7
2,585,261	+		GFF2569	0.39	-0.4
2,585,269	-		GFF2569	0.41	-1.2
2,585,302	-		GFF2569	0.47	+2.1
2,585,307	+		GFF2569	0.47	-0.7
2,585,307	-		GFF2569	0.47	+0.7
2,585,307	-		GFF2569	0.47	+0.5
2,585,315	-		GFF2569	0.49	+0.6
2,585,315	-		GFF2569	0.49	-0.3
2,585,318	+		GFF2569	0.49	-0.3
2,585,359	+		GFF2569	0.56	+0.6
2,585,359	+		GFF2569	0.56	-2.5
2,585,359	+		GFF2569	0.56	-0.5
2,585,359	+		GFF2569	0.56	-0.2
2,585,367	-		GFF2569	0.58	+0.2
2,585,367	-		GFF2569	0.58	+0.2
2,585,367	-		GFF2569	0.58	+0.8
2,585,391	-		GFF2569	0.62	-1.6
2,585,393	+		GFF2569	0.62	-0.3
2,585,393	-		GFF2569	0.62	+0.7
2,585,394	+		GFF2569	0.62	+2.3
2,585,394	+		GFF2569	0.62	-2.2
2,585,394	+		GFF2569	0.62	+0.9
2,585,395	+		GFF2569	0.63	-0.7
2,585,395	+		GFF2569	0.63	-0.1
2,585,400	+		GFF2569	0.64	-1.2
2,585,400	+		GFF2569	0.64	-0.2
2,585,401	-		GFF2569	0.64	-3.2
2,585,402	-		GFF2569	0.64	-1.3
2,585,402	-		GFF2569	0.64	-2.2
2,585,402	-		GFF2569	0.64	-0.0
2,585,403	-		GFF2569	0.64	+1.4
2,585,403	-		GFF2569	0.64	+0.7
2,585,403	-		GFF2569	0.64	-0.8
2,585,414	+		GFF2569	0.66	-0.4
2,585,414	+		GFF2569	0.66	-0.7
2,585,414	+		GFF2569	0.66	-1.8
2,585,414	-		GFF2569	0.66	+0.2
2,585,420	+		GFF2569	0.67	-0.5
2,585,420	+		GFF2569	0.67	+0.3
2,585,422	-		GFF2569	0.67	+0.8
2,585,422	-		GFF2569	0.67	+0.0
2,585,423	-		GFF2569	0.68	+0.5
2,585,439	+		GFF2569	0.70	-0.9
2,585,447	-		GFF2569	0.72	-1.4
2,585,447	-		GFF2569	0.72	+0.6
2,585,447	-		GFF2569	0.72	-1.9
2,585,449	+		GFF2569	0.72	-1.5
2,585,474	+		GFF2569	0.76	-0.6
2,585,484	+		GFF2569	0.78	-0.5
2,585,494	-		GFF2569	0.80	+1.0
2,585,494	-		GFF2569	0.80	+0.7
2,585,538	-		GFF2569	0.88	-0.9
2,585,551	+		GFF2569	0.90	-2.2
2,585,551	+		GFF2569	0.90	-0.2
2,585,551	+		GFF2569	0.90	+0.6
2,585,551	+		GFF2569	0.90	+0.3
2,585,551	+		GFF2569	0.90	+0.8
2,585,559	-				-0.6
2,585,559	-				+1.4
2,585,559	-				+0.4
2,585,559	-				+0.4
2,585,559	-				+0.3
2,585,573	-				+0.5
2,585,598	+				-1.2
2,585,606	-				-1.4
2,585,617	+				-0.0
2,585,634	-				-0.4
2,585,641	+				+0.3
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