Strain Fitness in Sphingobium sp. HT1-2 around GFF2247

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,273,027	+				-0.6
2,273,034	+				-1.3
2,273,037	+				-0.8
2,273,037	+				+0.6
2,273,037	+				+0.9
2,273,045	-				+0.4
2,273,055	+				-2.5
2,273,062	+				-0.1
2,273,068	-				+0.3
2,273,068	-				-1.3
2,273,082	-				+0.7
2,273,093	-				-0.1
2,273,098	+				-1.3
2,273,112	-				-0.5
2,273,265	+		GFF2246	0.15	-0.2
2,273,265	+		GFF2246	0.15	-0.8
2,273,330	-		GFF2246	0.25	-0.0
2,273,331	+		GFF2246	0.25	-0.6
2,273,354	+		GFF2246	0.29	-0.6
2,273,371	-		GFF2246	0.31	-0.8
2,273,378	+		GFF2246	0.32	+0.1
2,273,378	+		GFF2246	0.32	+0.3
2,273,386	-		GFF2246	0.34	-0.5
2,273,410	+		GFF2246	0.37	-1.5
2,273,410	+		GFF2246	0.37	+1.3
2,273,431	+		GFF2246	0.41	-0.2
2,273,436	+		GFF2246	0.41	-1.1
2,273,436	+		GFF2246	0.41	-1.5
2,273,436	+		GFF2246	0.41	-0.4
2,273,442	+		GFF2246	0.42	+0.1
2,273,444	-		GFF2246	0.43	+0.3
2,273,444	-		GFF2246	0.43	+0.4
2,273,444	-		GFF2246	0.43	-0.8
2,273,450	-		GFF2246	0.43	-0.1
2,273,476	+		GFF2246	0.47	-1.1
2,273,478	+		GFF2246	0.48	+0.6
2,273,478	+		GFF2246	0.48	-0.2
2,273,486	-		GFF2246	0.49	+0.9
2,273,496	-		GFF2246	0.50	-0.6
2,273,497	+		GFF2246	0.51	+0.1
2,273,501	-		GFF2246	0.51	-0.1
2,273,512	+		GFF2246	0.53	+0.5
2,273,520	-		GFF2246	0.54	-0.4
2,273,520	-		GFF2246	0.54	-0.2
2,273,520	-		GFF2246	0.54	-1.1
2,273,522	+		GFF2246	0.54	-0.8
2,273,530	-		GFF2246	0.56	-2.0
2,273,544	+		GFF2246	0.58	+0.8
2,273,552	-		GFF2246	0.59	-1.4
2,273,559	-		GFF2246	0.60	-1.3
2,273,614	-		GFF2246	0.69	-0.3
2,273,615	-		GFF2246	0.69	+0.0
2,273,626	+		GFF2246	0.70	-0.4
2,273,626	+		GFF2246	0.70	-0.3
2,273,626	+		GFF2246	0.70	+0.7
2,273,626	+		GFF2246	0.70	+1.5
2,273,626	+		GFF2246	0.70	-0.2
2,273,626	+		GFF2246	0.70	-0.5
2,273,626	+		GFF2246	0.70	-0.4
2,273,626	+		GFF2246	0.70	-1.5
2,273,634	-		GFF2246	0.72	-1.3
2,273,634	-		GFF2246	0.72	+1.4
2,273,634	-		GFF2246	0.72	+0.9
2,273,634	-		GFF2246	0.72	+0.5
2,273,634	-		GFF2246	0.72	+0.2
2,273,634	-		GFF2246	0.72	-0.4
2,273,634	-		GFF2246	0.72	+0.8
2,273,634	-		GFF2246	0.72	-0.4
2,273,634	-		GFF2246	0.72	+0.4
2,273,634	-		GFF2246	0.72	+1.1
2,273,634	-		GFF2246	0.72	+0.3
2,273,634	-		GFF2246	0.72	+0.5
2,273,634	-		GFF2246	0.72	-0.1
2,273,634	-		GFF2246	0.72	-0.2
2,273,646	-		GFF2246	0.73	+0.3
2,273,654	+		GFF2246	0.75	-0.7
2,273,666	+		GFF2246	0.76	-1.0
2,273,669	-		GFF2246	0.77	+0.8
2,273,697	-		GFF2246	0.81	-0.7
2,273,698	-		GFF2246	0.81	-0.4
2,273,707	-		GFF2246	0.83	+0.5
2,273,714	-		GFF2246	0.84	+0.2
2,273,733	+		GFF2246	0.87	-0.5
2,273,733	+		GFF2246	0.87	-1.3
2,273,740	+		GFF2246	0.88	-1.1
2,273,754	-				-0.6
2,273,777	+				-1.3
2,273,777	+				+1.2
2,273,823	+				-0.5
2,273,830	-				-0.9
2,273,835	+				-0.3
2,273,843	-				-1.5
2,273,848	+				-2.0
2,273,863	+				-0.0
2,273,871	-				+1.2
2,273,871	-				-0.6
2,273,876	-				+1.1
2,273,932	+				+0.2
2,273,947	+				+0.2
2,273,947	+				-0.1
2,273,955	-				+0.4
2,273,965	+				+0.8
2,273,973	-				-0.0
2,274,001	-				+0.0
2,274,040	+				-1.7
2,274,068	-				-0.2
2,274,068	-				-0.3
2,274,070	+				+0.3
2,274,090	-				-0.7
2,274,095	+				+0.2
2,274,131	-				-0.0
2,274,131	-				+0.2
2,274,145	+		GFF2247	0.11	+0.3
2,274,172	+		GFF2247	0.13	-0.4
2,274,192	+		GFF2247	0.14	-3.0
2,274,223	-		GFF2247	0.16	-0.6
2,274,223	-		GFF2247	0.16	+0.4
2,274,227	+		GFF2247	0.16	+1.0
2,274,227	+		GFF2247	0.16	-0.6
2,274,235	-		GFF2247	0.17	+0.4
2,274,248	-		GFF2247	0.18	+0.3
2,274,285	+		GFF2247	0.21	+0.7
2,274,285	+		GFF2247	0.21	-0.1
2,274,285	+		GFF2247	0.21	+0.3
2,274,285	+		GFF2247	0.21	-1.1
2,274,293	-		GFF2247	0.21	+0.5
2,274,297	+		GFF2247	0.22	-1.6
2,274,332	-		GFF2247	0.24	-0.6
2,274,365	+		GFF2247	0.26	-1.6
2,274,369	-		GFF2247	0.27	-0.2
2,274,414	-		GFF2247	0.30	+0.7
2,274,414	-		GFF2247	0.30	+1.0
2,274,428	+		GFF2247	0.31	-0.6
2,274,478	+		GFF2247	0.34	-0.5
2,274,478	+		GFF2247	0.34	-1.3
2,274,482	+		GFF2247	0.35	-1.1
2,274,490	-		GFF2247	0.35	+0.6
2,274,501	+		GFF2247	0.36	+0.2
2,274,501	+		GFF2247	0.36	+0.9
2,274,501	+		GFF2247	0.36	-0.3
2,274,507	-		GFF2247	0.37	+0.2
2,274,509	+		GFF2247	0.37	-2.4
2,274,509	-		GFF2247	0.37	-1.4
2,274,509	-		GFF2247	0.37	-1.6
2,274,509	-		GFF2247	0.37	-1.3
2,274,566	+		GFF2247	0.41	-1.6
2,274,566	+		GFF2247	0.41	+0.2
2,274,566	+		GFF2247	0.41	-1.6
2,274,574	-		GFF2247	0.41	+0.8
2,274,582	+		GFF2247	0.42	+0.6
2,274,587	+		GFF2247	0.42	-0.4
2,274,590	-		GFF2247	0.43	-0.6
2,274,590	-		GFF2247	0.43	-0.4
2,274,590	-		GFF2247	0.43	-0.4
2,274,593	+		GFF2247	0.43	-0.6
2,274,614	+		GFF2247	0.44	-1.4
2,274,624	+		GFF2247	0.45	-0.1
2,274,634	+		GFF2247	0.46	+0.7
2,274,642	-		GFF2247	0.46	-0.5
2,274,642	-		GFF2247	0.46	+0.2
2,274,653	+		GFF2247	0.47	-0.1
2,274,653	+		GFF2247	0.47	-2.5
2,274,653	+		GFF2247	0.47	-0.5
2,274,661	-		GFF2247	0.48	+1.1
2,274,661	-		GFF2247	0.48	+0.7
2,274,661	-		GFF2247	0.48	-2.0
2,274,661	-		GFF2247	0.48	-0.3
2,274,674	-		GFF2247	0.49	+1.2
2,274,697	-		GFF2247	0.50	+0.1
2,274,737	-		GFF2247	0.53	+0.9
2,274,737	-		GFF2247	0.53	-0.6
2,274,737	-		GFF2247	0.53	-0.4
2,274,745	+		GFF2247	0.54	-2.0
2,274,745	+		GFF2247	0.54	-1.3
2,274,745	+		GFF2247	0.54	+0.5
2,274,745	+		GFF2247	0.54	+0.2
2,274,746	-		GFF2247	0.54	+1.7
2,274,757	-		GFF2247	0.54	-2.0
2,274,782	+		GFF2247	0.56	-1.0
2,274,790	-		GFF2247	0.57	-0.3
2,274,790	-		GFF2247	0.57	+0.2
2,274,790	-		GFF2247	0.57	-1.9
2,274,790	-		GFF2247	0.57	-0.4
2,274,798	+		GFF2247	0.57	-0.3
2,274,798	+		GFF2247	0.57	-0.7
2,274,798	+		GFF2247	0.57	-0.1
2,274,803	+		GFF2247	0.58	-0.7
2,274,806	-		GFF2247	0.58	-1.9
2,274,819	-		GFF2247	0.59	+0.1
2,274,830	+		GFF2247	0.60	+1.0
2,274,838	-		GFF2247	0.60	-0.7
2,274,855	+		GFF2247	0.62	-0.5
2,274,857	-		GFF2247	0.62	-0.4
2,274,863	-		GFF2247	0.62	+0.7
2,274,866	+		GFF2247	0.62	+1.2
2,274,866	+		GFF2247	0.62	+0.6
2,274,866	+		GFF2247	0.62	-0.4
2,274,866	+		GFF2247	0.62	+1.8
2,274,866	+		GFF2247	0.62	-0.7
2,274,866	+		GFF2247	0.62	+0.7
2,274,866	+		GFF2247	0.62	-1.5
2,274,866	+		GFF2247	0.62	-1.6
2,274,866	+		GFF2247	0.62	+0.5
2,274,866	+		GFF2247	0.62	-0.4
2,274,866	+		GFF2247	0.62	-0.7
2,274,866	+		GFF2247	0.62	-1.8
2,274,874	-		GFF2247	0.63	-1.3
2,274,874	-		GFF2247	0.63	+0.5
2,274,874	-		GFF2247	0.63	-0.4
2,274,874	-		GFF2247	0.63	+0.8
2,274,874	-		GFF2247	0.63	+0.3
2,274,874	-		GFF2247	0.63	-0.2
2,274,874	-		GFF2247	0.63	-0.1
2,274,904	+		GFF2247	0.65	+1.2
2,274,909	+		GFF2247	0.65	-1.1
2,274,909	+		GFF2247	0.65	+0.0
2,274,909	+		GFF2247	0.65	-2.1
2,274,912	-		GFF2247	0.66	-0.4
2,274,917	-		GFF2247	0.66	-0.1
2,274,917	-		GFF2247	0.66	+0.5
2,274,917	-		GFF2247	0.66	-0.0
2,274,982	+		GFF2247	0.71	+1.2
2,274,982	+		GFF2247	0.71	+0.7
2,274,982	-		GFF2247	0.71	-0.9
2,274,990	-		GFF2247	0.71	-2.7
2,275,007	-		GFF2247	0.72	-0.8
2,275,007	-		GFF2247	0.72	-0.1
2,275,033	-		GFF2247	0.74	-0.6
2,275,039	-		GFF2247	0.75	-0.8
2,275,039	-		GFF2247	0.75	-1.0
2,275,039	-		GFF2247	0.75	-1.0
2,275,053	+		GFF2247	0.76	-0.3
2,275,065	+		GFF2247	0.77	-0.3
2,275,066	-		GFF2247	0.77	+0.2
2,275,073	-		GFF2247	0.77	-0.6
2,275,073	-		GFF2247	0.77	-1.8
2,275,073	-		GFF2247	0.77	+0.1
2,275,073	-		GFF2247	0.77	+0.5
2,275,086	-		GFF2247	0.78	-0.4
2,275,109	-		GFF2247	0.80	+1.1
2,275,177	-		GFF2247	0.85	+0.1
2,275,178	+		GFF2247	0.85	-0.5
2,275,178	+		GFF2247	0.85	+0.9
2,275,178	+		GFF2247	0.85	+0.2
2,275,178	+		GFF2247	0.85	-1.7
2,275,186	-		GFF2247	0.85	-0.6
2,275,186	-		GFF2247	0.85	+0.2
2,275,186	-		GFF2247	0.85	+0.6
2,275,186	-		GFF2247	0.85	+1.2
2,275,196	-		GFF2247	0.86	-0.3
2,275,196	-		GFF2247	0.86	-1.0
2,275,199	+		GFF2247	0.86	-0.1
2,275,208	-		GFF2247	0.87	-0.5
2,275,232	-		GFF2247	0.89	-1.1
2,275,247	+		GFF2247	0.90	-0.1
2,275,255	+				+0.1
2,275,255	-				-0.0
2,275,255	-				-0.3
2,275,257	+				-0.7
2,275,257	+				-0.1
2,275,257	+				-1.4
2,275,265	-				-0.1
2,275,265	-				+0.4
2,275,278	+				-1.2
2,275,278	+				-0.3
2,275,286	-				+1.4
2,275,286	-				-1.0
2,275,298	+				-0.5
2,275,312	+				-0.6
2,275,322	+				-1.3
2,275,322	+				+1.2
2,275,356	+				-1.0
2,275,364	-				+0.0
2,275,371	+				-1.7
2,275,391	+				-0.2
2,275,399	-				-1.2
2,275,400	+				-1.2
2,275,416	+				-1.2
2,275,416	+				-2.2
2,275,424	-				-2.3
2,275,424	-				-0.9
2,275,424	-				-0.1
2,275,438	+				-0.3
2,275,462	+				+0.3
2,275,490	-				-0.7
2,275,499	+				-1.4
2,275,505	-				+0.5
2,275,507	-				-2.0
2,275,507	-				-1.3
2,275,507	-				-0.9
2,275,507	-				-2.2
2,275,507	-				-0.6
2,275,509	+				-0.2
2,275,512	-				-1.7
2,275,514	+				-0.7
2,275,514	+				-0.6
2,275,514	+				-0.6
2,275,514	+				-2.2
2,275,517	-				-0.8
2,275,517	-				+1.6
2,275,517	-				-1.0
2,275,517	-				+0.8
2,275,517	-				+0.5
2,275,517	-				+1.2
2,275,522	-				-1.3
2,275,522	-				-0.3
2,275,522	-				+0.5
2,275,532	-				+0.1
2,275,532	-				-1.9
2,275,532	-				+0.7
2,275,532	-				-0.0
2,275,532	-				-0.6
2,275,534	+				-0.8
2,275,543	+				-0.8
2,275,543	+				-2.7
2,275,566	+				+0.2
2,275,568	+				-0.7
2,275,581	-				-0.6
2,275,592	-				-0.4
2,275,592	-				-0.3
2,275,614	-				-0.3
2,275,615	+				-0.0
2,275,615	+				+0.5
2,275,615	+				-3.1
2,275,623	-				-0.3
2,275,623	-				+0.3
2,275,640	+				-1.4
2,275,648	-				-0.2
2,275,650	+				-1.4
2,275,650	+				-0.3
2,275,650	+				-0.6
2,275,650	+				-2.1
2,275,650	+				+0.3
2,275,650	+				-0.6
2,275,653	-				-0.4
2,275,655	+				-0.8
2,275,658	-				-0.0
2,275,658	-				-0.8
2,275,658	-				-1.3
2,275,658	-				-0.9
2,275,658	-				-0.3
2,275,658	-				-1.0
2,275,658	-				-1.1
2,275,658	-				-0.8
2,275,666	+				-2.1
2,275,669	-				-0.3
2,275,671	+				-1.0
2,275,675	-				-0.1
2,275,712	-				-0.8
2,275,712	-				+0.7
2,275,733	+				+1.8
2,275,736	-				+1.0
2,275,741	-				-1.8
2,275,743	+				+0.7
2,275,748	+				+1.3
2,275,748	+				-0.8
2,275,751	-				-1.9
2,275,756	-				-0.1
2,275,756	-				-1.3
2,275,756	-				+0.0
2,275,756	-				-0.7
2,275,765	-				-0.2
2,275,786	+				-0.5
2,275,794	-				-1.9
2,275,827	+		GFF2248	0.10	+0.3
2,275,912	-		GFF2248	0.12	-0.9
2,275,916	-		GFF2248	0.12	-0.1
2,275,916	-		GFF2248	0.12	-0.4
2,275,924	-		GFF2248	0.13	+0.0
2,275,926	+		GFF2248	0.13	-0.6
2,275,926	+		GFF2248	0.13	-0.7
2,275,926	+		GFF2248	0.13	+0.7
2,275,926	+		GFF2248	0.13	-0.4
2,275,934	-		GFF2248	0.13	+0.0
2,275,934	-		GFF2248	0.13	+0.7
2,275,934	-		GFF2248	0.13	-1.2
2,275,934	-		GFF2248	0.13	-1.1
2,275,971	-		GFF2248	0.14	-1.9
2,276,013	-		GFF2248	0.15	+0.3
2,276,014	+		GFF2248	0.15	+0.8
2,276,038	+		GFF2248	0.15	+0.0
2,276,038	+		GFF2248	0.15	-0.0
2,276,043	+		GFF2248	0.15	-1.5
2,276,043	+		GFF2248	0.15	+0.7
2,276,046	-		GFF2248	0.16	-1.8
2,276,051	-		GFF2248	0.16	-0.6
2,276,051	-		GFF2248	0.16	-0.9
2,276,051	-		GFF2248	0.16	+0.7
2,276,058	+		GFF2248	0.16	+0.1
2,276,096	+		GFF2248	0.17	-0.5
2,276,096	+		GFF2248	0.17	+1.3
2,276,096	+		GFF2248	0.17	-1.4
2,276,096	+		GFF2248	0.17	-1.3
2,276,099	-		GFF2248	0.17	-1.6
2,276,101	+		GFF2248	0.17	-0.5
2,276,101	+		GFF2248	0.17	-1.3
2,276,101	+		GFF2248	0.17	+1.2
2,276,104	-		GFF2248	0.17	+0.4
2,276,104	-		GFF2248	0.17	-1.4
2,276,104	-		GFF2248	0.17	+0.5
2,276,104	-		GFF2248	0.17	+0.4
2,276,109	-		GFF2248	0.17	-0.5
2,276,124	-		GFF2248	0.17	-1.3
2,276,124	-		GFF2248	0.17	-2.1
2,276,157	-		GFF2248	0.18	-1.1
2,276,165	-		GFF2248	0.18	+0.1
2,276,165	-		GFF2248	0.18	-0.6
2,276,183	-		GFF2248	0.19	-2.1
2,276,189	+		GFF2248	0.19	-0.9
2,276,194	+		GFF2248	0.19	-0.5
2,276,197	-		GFF2248	0.19	-0.3
2,276,209	-		GFF2248	0.19	+0.2
2,276,215	+		GFF2248	0.20	-1.6
2,276,217	-		GFF2248	0.20	+1.1
2,276,220	+		GFF2248	0.20	-0.1
2,276,220	-		GFF2248	0.20	+0.3
2,276,223	-		GFF2248	0.20	+0.0
2,276,228	-		GFF2248	0.20	-1.1
2,276,253	-		GFF2248	0.20	+0.4
2,276,271	+		GFF2248	0.21	-0.4
2,276,272	-		GFF2248	0.21	-1.3
2,276,277	-		GFF2248	0.21	-1.9
2,276,303	+		GFF2248	0.22	+1.0
2,276,303	+		GFF2248	0.22	-1.0
2,276,305	+		GFF2248	0.22	-0.6
2,276,311	-		GFF2248	0.22	-0.1
2,276,311	-		GFF2248	0.22	-0.7
2,276,311	-		GFF2248	0.22	+0.3
2,276,313	-		GFF2248	0.22	+0.7
2,276,313	-		GFF2248	0.22	-0.3
2,276,318	+		GFF2248	0.22	-0.2
2,276,328	+		GFF2248	0.22	-0.4
2,276,335	+		GFF2248	0.22	-1.8
2,276,335	+		GFF2248	0.22	-1.6
2,276,341	+		GFF2248	0.23	-0.1
2,276,343	-		GFF2248	0.23	-0.0
2,276,355	+		GFF2248	0.23	+1.3
2,276,355	+		GFF2248	0.23	+0.3
2,276,388	+		GFF2248	0.24	+0.5
2,276,388	+		GFF2248	0.24	+0.0