Strain Fitness in Sphingobium sp. HT1-2 around GFF1651

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,674,606	+				-3.2
1,674,611	-				-1.5
1,674,631	+				+0.3
1,674,646	+				-0.3
1,674,674	-				+0.6
1,674,675	+				-0.5
1,674,675	+				-0.8
1,674,675	+				-0.8
1,674,675	+				-0.1
1,674,675	+				-0.1
1,674,675	+				+0.1
1,674,675	+				-0.9
1,674,683	-				-1.8
1,674,722	-		GFF1648	0.19	+0.5
1,674,731	+		GFF1648	0.22	+0.9
1,674,739	-		GFF1648	0.24	+0.4
1,674,786	-		GFF1648	0.41	-1.5
1,674,786	-		GFF1648	0.41	+0.5
1,674,800	-		GFF1648	0.45	-0.2
1,674,802	+		GFF1648	0.46	-1.8
1,674,818	+		GFF1648	0.52	-1.3
1,674,818	+		GFF1648	0.52	+0.1
1,674,833	+		GFF1648	0.57	-1.1
1,674,841	-		GFF1648	0.59	+1.1
1,674,846	-		GFF1648	0.61	+0.7
1,674,847	-		GFF1648	0.62	-1.3
1,674,872	-		GFF1648	0.70	-1.6
1,674,903	+		GFF1648	0.81	+0.9
1,674,903	+		GFF1648	0.81	-0.3
1,674,903	+		GFF1648	0.81	-0.6
1,674,903	+		GFF1648	0.81	-0.2
1,674,903	+		GFF1648	0.81	+1.3
1,674,903	+		GFF1648	0.81	+1.1
1,674,940	+				+0.9
1,674,946	+				+0.1
1,674,955	-				-0.7
1,674,965	-				-0.1
1,674,973	-				+0.5
1,674,987	+				-0.3
1,674,992	+				-0.7
1,674,992	+				-1.7
1,675,120	+				-0.3
1,675,125	+				-0.8
1,675,125	+				+0.4
1,675,125	+				+0.5
1,675,125	+				+0.4
1,675,125	+				-1.3
1,675,133	-				-0.5
1,675,133	-				+0.3
1,675,133	-				+0.2
1,675,133	-				-0.8
1,675,133	-				-1.2
1,675,133	-				-0.5
1,675,133	-				-1.5
1,675,164	+		GFF1650	0.18	+1.1
1,675,164	+		GFF1650	0.18	-0.1
1,675,164	+		GFF1650	0.18	-0.3
1,675,192	+		GFF1650	0.27	+1.1
1,675,193	+		GFF1650	0.28	-0.4
1,675,193	+		GFF1650	0.28	-1.5
1,675,197	-		GFF1650	0.29	-0.6
1,675,198	+		GFF1650	0.29	+0.5
1,675,201	-		GFF1650	0.30	-0.3
1,675,201	-		GFF1650	0.30	-0.3
1,675,224	-		GFF1650	0.38	-0.2
1,675,225	-		GFF1650	0.38	-0.8
1,675,262	+		GFF1650	0.51	-1.1
1,675,262	+		GFF1650	0.51	-0.8
1,675,307	+		GFF1650	0.66	+0.1
1,675,317	-		GFF1650	0.69	-1.8
1,675,324	+		GFF1650	0.71	-1.4
1,675,324	+		GFF1650	0.71	-0.5
1,675,324	+		GFF1650	0.71	-0.0
1,675,328	+		GFF1650	0.73	-0.2
1,675,331	-		GFF1650	0.74	-1.3
1,675,331	-		GFF1650	0.74	+0.7
1,675,332	-		GFF1650	0.74	+0.7
1,675,334	+		GFF1650	0.75	+0.3
1,675,334	+		GFF1650	0.75	+1.6
1,675,341	-		GFF1650	0.77	-0.2
1,675,342	-		GFF1650	0.77	-2.4
1,675,342	-		GFF1650	0.77	+0.1
1,675,342	-		GFF1650	0.77	-0.8
1,675,342	-		GFF1650	0.77	+0.3
1,675,342	-		GFF1650	0.77	-0.3
1,675,350	+		GFF1650	0.80	+0.7
1,675,350	+		GFF1650	0.80	-0.2
1,675,353	-		GFF1650	0.81	-0.1
1,675,358	-		GFF1650	0.83	+0.0
1,675,358	-		GFF1650	0.83	-1.2
1,675,358	-		GFF1650	0.83	-1.3
1,675,358	-		GFF1650	0.83	+1.2
1,675,363	-		GFF1650	0.84	-0.3
1,675,366	+		GFF1650	0.85	+1.1
1,675,369	-		GFF1650	0.86	-0.2
1,675,369	-		GFF1650	0.86	+1.0
1,675,371	+		GFF1650	0.87	+0.2
1,675,413	+				-1.0
1,675,420	-				+0.3
1,675,423	+				-0.2
1,675,510	+				+0.5
1,675,514	+				+0.6
1,675,519	+				-1.5
1,675,522	-				+0.5
1,675,564	+				+0.7
1,675,605	-				+0.3
1,675,646	+				+0.5
1,675,656	+				+0.5
1,675,656	+				+0.6
1,675,656	+				-0.6
1,675,656	+				-1.5
1,675,659	-				+0.8
1,675,661	+				+0.1
1,675,664	-				+0.1
1,675,688	+				-0.8
1,675,723	-				-1.3
1,675,749	-				-0.3
1,675,836	+		GFF1651	0.13	-0.5
1,675,854	-		GFF1651	0.14	+1.4
1,675,855	+		GFF1651	0.15	-0.3
1,675,860	+		GFF1651	0.15	-0.2
1,675,863	-		GFF1651	0.15	+0.8
1,675,896	+		GFF1651	0.17	+1.2
1,675,906	+		GFF1651	0.17	-2.1
1,675,923	+		GFF1651	0.18	-0.5
1,675,936	-		GFF1651	0.19	+0.1
1,675,936	-		GFF1651	0.19	-0.8
1,675,948	+		GFF1651	0.20	+1.0
1,675,953	+		GFF1651	0.20	-0.2
1,675,962	+		GFF1651	0.21	+0.5
1,675,993	+		GFF1651	0.22	+1.2
1,675,999	+		GFF1651	0.23	+0.7
1,675,999	+		GFF1651	0.23	-1.1
1,675,999	+		GFF1651	0.23	-1.9
1,675,999	+		GFF1651	0.23	-0.5
1,675,999	+		GFF1651	0.23	-1.2
1,675,999	+		GFF1651	0.23	-0.9
1,675,999	+		GFF1651	0.23	+0.9
1,675,999	+		GFF1651	0.23	-0.8
1,675,999	+		GFF1651	0.23	-0.2
1,676,001	-		GFF1651	0.23	+1.1
1,676,004	+		GFF1651	0.23	-1.0
1,676,005	+		GFF1651	0.23	-1.8
1,676,005	+		GFF1651	0.23	-0.1
1,676,005	+		GFF1651	0.23	-0.9
1,676,005	+		GFF1651	0.23	+0.2
1,676,005	+		GFF1651	0.23	-1.2
1,676,005	+		GFF1651	0.23	+0.4
1,676,005	+		GFF1651	0.23	+0.2
1,676,006	-		GFF1651	0.23	-0.9
1,676,007	-		GFF1651	0.23	-0.6
1,676,007	-		GFF1651	0.23	-2.3
1,676,007	-		GFF1651	0.23	-0.9
1,676,007	-		GFF1651	0.23	-0.2
1,676,007	-		GFF1651	0.23	-0.6
1,676,010	+		GFF1651	0.23	-0.1
1,676,010	+		GFF1651	0.23	+0.7
1,676,013	-		GFF1651	0.23	-0.0
1,676,013	-		GFF1651	0.23	+1.5
1,676,013	-		GFF1651	0.23	+0.1
1,676,015	+		GFF1651	0.23	-0.5
1,676,015	+		GFF1651	0.23	+0.9
1,676,015	+		GFF1651	0.23	+0.1
1,676,015	+		GFF1651	0.23	+0.8
1,676,015	+		GFF1651	0.23	-0.2
1,676,015	+		GFF1651	0.23	+0.4
1,676,015	+		GFF1651	0.23	+1.2
1,676,018	-		GFF1651	0.24	+0.2
1,676,018	-		GFF1651	0.24	+0.3
1,676,018	-		GFF1651	0.24	+0.8
1,676,023	-		GFF1651	0.24	-1.5
1,676,023	-		GFF1651	0.24	-0.6
1,676,023	-		GFF1651	0.24	-2.8
1,676,023	-		GFF1651	0.24	-0.1
1,676,023	-		GFF1651	0.24	-1.9
1,676,050	-		GFF1651	0.25	+0.2
1,676,090	+		GFF1651	0.28	+0.4
1,676,120	+		GFF1651	0.29	-0.5
1,676,140	+		GFF1651	0.30	+0.5
1,676,146	-		GFF1651	0.31	+0.4
1,676,148	+		GFF1651	0.31	-0.3
1,676,148	+		GFF1651	0.31	+0.6
1,676,148	+		GFF1651	0.31	-0.6
1,676,155	-		GFF1651	0.31	+0.7
1,676,158	+		GFF1651	0.31	-0.5
1,676,183	+		GFF1651	0.33	-1.7
1,676,195	+		GFF1651	0.34	+0.4
1,676,195	+		GFF1651	0.34	-0.3
1,676,195	+		GFF1651	0.34	+0.1
1,676,195	+		GFF1651	0.34	-1.4
1,676,195	+		GFF1651	0.34	+0.5
1,676,195	+		GFF1651	0.34	-0.7
1,676,195	+		GFF1651	0.34	+0.4
1,676,195	+		GFF1651	0.34	+0.2
1,676,195	+		GFF1651	0.34	+0.1
1,676,195	+		GFF1651	0.34	-0.5
1,676,195	+		GFF1651	0.34	+0.1
1,676,195	+		GFF1651	0.34	+0.2
1,676,195	+		GFF1651	0.34	-0.5
1,676,195	+		GFF1651	0.34	+0.2
1,676,195	+		GFF1651	0.34	-0.2
1,676,195	+		GFF1651	0.34	-0.6
1,676,195	+		GFF1651	0.34	+0.4
1,676,195	+		GFF1651	0.34	-0.1
1,676,195	+		GFF1651	0.34	+0.1
1,676,203	-		GFF1651	0.34	-0.2
1,676,203	-		GFF1651	0.34	-1.6
1,676,203	-		GFF1651	0.34	+0.5
1,676,203	-		GFF1651	0.34	-0.6
1,676,203	-		GFF1651	0.34	+0.8
1,676,203	-		GFF1651	0.34	-0.3
1,676,203	-		GFF1651	0.34	-0.6
1,676,203	-		GFF1651	0.34	-0.6
1,676,203	-		GFF1651	0.34	-2.4
1,676,203	-		GFF1651	0.34	-0.2
1,676,203	-		GFF1651	0.34	-0.6
1,676,203	-		GFF1651	0.34	+0.8
1,676,203	-		GFF1651	0.34	+0.2
1,676,203	-		GFF1651	0.34	+0.3
1,676,203	-		GFF1651	0.34	+0.2
1,676,205	+		GFF1651	0.34	-0.5
1,676,205	+		GFF1651	0.34	-0.6
1,676,213	-		GFF1651	0.35	-0.8
1,676,213	-		GFF1651	0.35	+0.8
1,676,213	-		GFF1651	0.35	+0.8
1,676,231	-		GFF1651	0.36	-0.1
1,676,251	+		GFF1651	0.37	+0.4
1,676,292	-		GFF1651	0.39	-0.5
1,676,302	+		GFF1651	0.40	-0.2
1,676,322	+		GFF1651	0.41	-1.3
1,676,322	+		GFF1651	0.41	-0.8
1,676,334	-		GFF1651	0.41	-0.9
1,676,342	+		GFF1651	0.42	-0.3
1,676,357	+		GFF1651	0.43	-0.9
1,676,376	+		GFF1651	0.44	+0.4
1,676,385	+		GFF1651	0.44	-0.4
1,676,410	+		GFF1651	0.46	+0.7
1,676,439	+		GFF1651	0.47	-0.3
1,676,441	+		GFF1651	0.47	+0.1
1,676,441	+		GFF1651	0.47	-1.5
1,676,449	-		GFF1651	0.48	+1.2
1,676,449	-		GFF1651	0.48	+0.2
1,676,468	+		GFF1651	0.49	-0.4
1,676,481	+		GFF1651	0.50	-1.6
1,676,488	+		GFF1651	0.50	-1.8
1,676,488	+		GFF1651	0.50	-0.2
1,676,488	+		GFF1651	0.50	-1.2
1,676,488	+		GFF1651	0.50	-1.1
1,676,488	+		GFF1651	0.50	+1.2
1,676,488	+		GFF1651	0.50	+0.1
1,676,488	+		GFF1651	0.50	-0.0
1,676,488	+		GFF1651	0.50	-0.0
1,676,496	-		GFF1651	0.50	-0.2
1,676,496	-		GFF1651	0.50	-0.8
1,676,496	-		GFF1651	0.50	+1.6
1,676,496	-		GFF1651	0.50	-0.4
1,676,504	+		GFF1651	0.51	-1.0
1,676,509	+		GFF1651	0.51	-1.1
1,676,518	+		GFF1651	0.52	+0.4
1,676,524	+		GFF1651	0.52	+0.8
1,676,526	-		GFF1651	0.52	+0.6
1,676,526	-		GFF1651	0.52	-1.5
1,676,527	-		GFF1651	0.52	+0.6
1,676,532	-		GFF1651	0.52	-0.6
1,676,562	+		GFF1651	0.54	-0.8
1,676,563	-		GFF1651	0.54	+0.3
1,676,590	+		GFF1651	0.56	+0.3
1,676,600	+		GFF1651	0.56	-0.6
1,676,608	-		GFF1651	0.57	-0.2
1,676,631	+		GFF1651	0.58	-0.7
1,676,635	+		GFF1651	0.58	+0.2
1,676,636	+		GFF1651	0.58	+1.1
1,676,641	-		GFF1651	0.59	-0.3
1,676,643	-		GFF1651	0.59	-1.2
1,676,644	-		GFF1651	0.59	-0.3
1,676,697	-		GFF1651	0.62	-0.3
1,676,707	-		GFF1651	0.62	+0.6
1,676,707	-		GFF1651	0.62	-1.3
1,676,707	-		GFF1651	0.62	+0.7
1,676,772	+		GFF1651	0.66	-0.0
1,676,780	-		GFF1651	0.66	-1.6
1,676,819	+		GFF1651	0.69	-1.3
1,676,838	-		GFF1651	0.70	+0.2
1,676,856	+		GFF1651	0.71	-1.1
1,676,875	+		GFF1651	0.72	+0.0
1,676,875	+		GFF1651	0.72	-0.2
1,676,875	+		GFF1651	0.72	-0.1
1,676,898	-		GFF1651	0.73	+0.4
1,676,900	+		GFF1651	0.73	-0.5
1,676,900	+		GFF1651	0.73	-0.1
1,676,900	+		GFF1651	0.73	+0.9
1,676,900	+		GFF1651	0.73	-0.4
1,676,900	+		GFF1651	0.73	+2.0
1,676,900	+		GFF1651	0.73	+0.9
1,676,900	+		GFF1651	0.73	-0.0
1,676,900	+		GFF1651	0.73	+1.0
1,676,908	+		GFF1651	0.74	+0.9
1,676,908	+		GFF1651	0.74	-0.0
1,676,908	-		GFF1651	0.74	-0.7
1,676,908	-		GFF1651	0.74	-2.1
1,676,908	-		GFF1651	0.74	+0.0
1,676,908	-		GFF1651	0.74	+0.2
1,676,908	-		GFF1651	0.74	+0.1
1,676,908	-		GFF1651	0.74	+0.4
1,676,908	-		GFF1651	0.74	-0.4
1,676,908	-		GFF1651	0.74	-0.3
1,676,908	-		GFF1651	0.74	-1.1
1,676,908	-		GFF1651	0.74	-1.6
1,676,908	-		GFF1651	0.74	-1.5
1,676,908	-		GFF1651	0.74	-0.3
1,676,908	-		GFF1651	0.74	-1.1
1,676,916	-		GFF1651	0.74	-1.3
1,676,916	-		GFF1651	0.74	-0.2
1,676,916	-		GFF1651	0.74	-0.5
1,676,977	+		GFF1651	0.77	+0.2
1,676,985	-		GFF1651	0.78	-0.1
1,676,985	-		GFF1651	0.78	-1.5
1,676,987	+		GFF1651	0.78	-0.5
1,677,002	-		GFF1651	0.79	-1.0
1,677,013	+		GFF1651	0.79	-0.8
1,677,050	+		GFF1651	0.81	+1.1
1,677,054	-		GFF1651	0.82	+0.1
1,677,058	-		GFF1651	0.82	-1.8
1,677,067	+		GFF1651	0.82	-0.9
1,677,071	+		GFF1651	0.83	-0.8
1,677,107	-		GFF1651	0.85	-1.3
1,677,111	+		GFF1651	0.85	-0.6
1,677,164	+		GFF1651	0.88	-1.3
1,677,167	+		GFF1651	0.88	-1.3
1,677,172	-		GFF1651	0.88	-2.7
1,677,172	-		GFF1651	0.88	-0.1
1,677,172	-		GFF1651	0.88	-1.6
1,677,175	-		GFF1651	0.88	+0.8
1,677,181	-		GFF1651	0.89	+1.2
1,677,222	-				+0.5
1,677,222	-				-2.3
1,677,224	+				-0.3
1,677,275	-				-1.1
1,677,305	-				+0.7
1,677,329	+				+0.6
1,677,329	+				-0.3
1,677,329	+				-0.0
1,677,329	+				-0.8
1,677,329	+				-1.0
1,677,329	+				-1.9
1,677,329	+				+0.2
1,677,329	+				+0.3
1,677,337	-				+0.7
1,677,337	-				+1.1
1,677,337	-				-1.1
1,677,337	-				-1.7
1,677,337	-				-1.7
1,677,337	-				-0.6
1,677,337	-				-0.3
1,677,337	-				+0.1
1,677,337	-				+1.3
1,677,337	-				-0.2
1,677,337	-				+1.5
1,677,340	+				-1.5
1,677,345	+				+0.8
1,677,368	-				+0.7
1,677,372	+				+0.1
1,677,374	+				+0.2
1,677,382	-				-0.3
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1,677,421	-				-1.9
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