Strain Fitness in Sphingobium sp. HT1-2 around GFF1022

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,021,134	+				-1.1
1,021,137	-				-0.6
1,021,159	+				-1.4
1,021,167	-				-2.4
1,021,167	-				-1.7
1,021,181	+				-1.7
1,021,184	-				-1.2
1,021,184	-				-0.6
1,021,184	-				-0.4
1,021,186	+				-0.2
1,021,186	+				-0.1
1,021,186	+				-0.6
1,021,186	-				-0.4
1,021,186	-				+0.4
1,021,194	-				-1.3
1,021,212	-				+0.9
1,021,229	+				-0.1
1,021,237	+				-0.0
1,021,237	+				-2.1
1,021,237	+				+0.3
1,021,237	+				-0.6
1,021,238	-				+0.5
1,021,238	-				+0.9
1,021,238	-				-0.5
1,021,247	+				-0.3
1,021,258	-		GFF1021	0.11	-0.3
1,021,280	+		GFF1021	0.13	-0.0
1,021,287	+		GFF1021	0.14	-2.3
1,021,295	-		GFF1021	0.15	-1.0
1,021,338	+		GFF1021	0.19	-0.0
1,021,348	+		GFF1021	0.20	+0.5
1,021,356	-		GFF1021	0.21	-0.7
1,021,356	-		GFF1021	0.21	+0.2
1,021,356	-		GFF1021	0.21	-0.7
1,021,381	+		GFF1021	0.24	-1.2
1,021,381	+		GFF1021	0.24	-2.4
1,021,385	+		GFF1021	0.24	-0.8
1,021,393	-		GFF1021	0.25	-0.2
1,021,420	-		GFF1021	0.28	-2.3
1,021,449	+		GFF1021	0.31	+1.1
1,021,471	+		GFF1021	0.33	-1.1
1,021,486	-		GFF1021	0.34	+0.4
1,021,491	-		GFF1021	0.35	+0.3
1,021,503	+		GFF1021	0.36	-0.5
1,021,506	-		GFF1021	0.36	-0.7
1,021,506	-		GFF1021	0.36	-0.1
1,021,516	-		GFF1021	0.37	-1.7
1,021,520	-		GFF1021	0.38	-0.3
1,021,522	+		GFF1021	0.38	-0.7
1,021,525	-		GFF1021	0.38	-0.3
1,021,527	+		GFF1021	0.39	+0.1
1,021,527	+		GFF1021	0.39	-0.3
1,021,530	-		GFF1021	0.39	+0.0
1,021,532	+		GFF1021	0.39	-1.1
1,021,532	+		GFF1021	0.39	+0.8
1,021,535	-		GFF1021	0.39	+0.7
1,021,540	-		GFF1021	0.40	-2.7
1,021,540	-		GFF1021	0.40	-0.4
1,021,540	-		GFF1021	0.40	+1.5
1,021,540	-		GFF1021	0.40	-0.6
1,021,540	-		GFF1021	0.40	-0.4
1,021,578	+		GFF1021	0.44	-2.0
1,021,586	-		GFF1021	0.45	-0.6
1,021,588	-		GFF1021	0.45	+0.3
1,021,593	-		GFF1021	0.45	-0.2
1,021,659	-		GFF1021	0.52	+0.1
1,021,686	-		GFF1021	0.55	-0.5
1,021,713	-		GFF1021	0.58	-1.6
1,021,723	+		GFF1021	0.59	-0.2
1,021,723	+		GFF1021	0.59	+0.1
1,021,723	+		GFF1021	0.59	-0.7
1,021,723	+		GFF1021	0.59	-1.7
1,021,724	+		GFF1021	0.59	-1.4
1,021,731	-		GFF1021	0.60	+0.7
1,021,731	-		GFF1021	0.60	-1.1
1,021,746	-		GFF1021	0.61	+0.6
1,021,757	+		GFF1021	0.62	-0.4
1,021,757	+		GFF1021	0.62	-0.1
1,021,757	+		GFF1021	0.62	-0.8
1,021,765	-		GFF1021	0.63	-1.0
1,021,793	+		GFF1021	0.66	-1.2
1,021,842	-		GFF1021	0.71	+0.8
1,021,844	-		GFF1021	0.71	+0.0
1,021,853	+		GFF1021	0.72	-0.4
1,021,882	-		GFF1021	0.75	+0.0
1,021,886	+		GFF1021	0.76	-0.1
1,021,886	+		GFF1021	0.76	+0.3
1,021,892	+		GFF1021	0.76	-3.0
1,021,892	+		GFF1021	0.76	-0.0
1,021,896	-		GFF1021	0.77	-0.9
1,021,900	-		GFF1021	0.77	+0.6
1,021,900	-		GFF1021	0.77	+0.4
1,021,903	+		GFF1021	0.77	+0.1
1,021,911	+		GFF1021	0.78	-1.4
1,021,921	+		GFF1021	0.79	-1.6
1,021,927	-		GFF1021	0.80	-1.0
1,021,964	+		GFF1021	0.84	-2.2
1,021,964	-		GFF1021	0.84	-1.7
1,022,011	+		GFF1021	0.88	+0.4
1,022,050	+				-1.6
1,022,050	+				+1.2
1,022,060	+				+0.0
1,022,060	+				-0.4
1,022,070	+				-3.2
1,022,078	-				+0.6
1,022,083	-				+1.1
1,022,088	-				-1.3
1,022,088	-				+2.0
1,022,088	-				-0.5
1,022,088	-				+0.3
1,022,088	-				-0.3
1,022,090	+				-0.1
1,022,090	+				+0.3
1,022,091	+				+0.7
1,022,093	-				-0.7
1,022,098	-				-0.2
1,022,098	-				-1.6
1,022,099	-				-0.9
1,022,099	-				+1.0
1,022,110	+				-0.7
1,022,116	-				-0.2
1,022,128	+				-0.7
1,022,128	+				-0.2
1,022,128	+				+0.2
1,022,128	+				+0.6
1,022,128	+				+0.5
1,022,128	+				-1.4
1,022,128	+				+0.6
1,022,128	+				+0.7
1,022,128	+				-2.1
1,022,128	+				-0.1
1,022,128	+				-0.7
1,022,128	+				-0.1
1,022,128	+				-0.9
1,022,128	+				-0.9
1,022,133	+				-0.9
1,022,133	+				+0.1
1,022,133	+				-1.7
1,022,133	+				+0.2
1,022,133	+				-1.6
1,022,136	-				-0.6
1,022,136	-				-1.2
1,022,136	-				-1.3
1,022,136	-				-1.0
1,022,136	-				+0.8
1,022,136	-				-1.7
1,022,136	-				-0.9
1,022,136	-				-1.7
1,022,136	-				-2.3
1,022,136	-				-0.5
1,022,136	-				-0.8
1,022,136	-				+1.4
1,022,136	-				-0.2
1,022,136	-				+0.5
1,022,136	-				+0.2
1,022,136	-				-0.5
1,022,136	-				+1.4
1,022,136	-				-1.3
1,022,136	-				-0.3
1,022,136	-				-1.1
1,022,141	-				+1.0
1,022,141	-				+1.1
1,022,143	+				-0.2
1,022,151	-				-0.6
1,022,151	-				-1.3
1,022,154	+				-1.3
1,022,192	-				+0.8
1,022,192	-				-0.8
1,022,235	-		GFF1022	0.15	+0.7
1,022,240	+		GFF1022	0.16	-0.5
1,022,240	+		GFF1022	0.16	+0.2
1,022,240	+		GFF1022	0.16	-0.1
1,022,240	+		GFF1022	0.16	+0.7
1,022,240	+		GFF1022	0.16	-0.1
1,022,240	+		GFF1022	0.16	+1.6
1,022,240	+		GFF1022	0.16	-0.3
1,022,240	+		GFF1022	0.16	-1.7
1,022,240	+		GFF1022	0.16	-0.3
1,022,241	+		GFF1022	0.16	-1.4
1,022,245	+		GFF1022	0.16	-2.0
1,022,248	-		GFF1022	0.17	-1.1
1,022,248	-		GFF1022	0.17	-1.1
1,022,248	-		GFF1022	0.17	-0.8
1,022,248	-		GFF1022	0.17	+0.8
1,022,248	-		GFF1022	0.17	-1.1
1,022,248	-		GFF1022	0.17	+1.8
1,022,253	-		GFF1022	0.18	+0.1
1,022,264	+		GFF1022	0.19	+1.2
1,022,264	+		GFF1022	0.19	+0.0
1,022,264	+		GFF1022	0.19	-0.3
1,022,269	+		GFF1022	0.20	-0.6
1,022,272	-		GFF1022	0.20	-1.7
1,022,272	-		GFF1022	0.20	-2.2
1,022,272	-		GFF1022	0.20	-2.2
1,022,277	-		GFF1022	0.21	+0.9
1,022,285	+		GFF1022	0.22	+0.6
1,022,288	-		GFF1022	0.22	-0.7
1,022,306	+		GFF1022	0.25	-1.3
1,022,310	-		GFF1022	0.25	-0.3
1,022,310	-		GFF1022	0.25	+0.8
1,022,332	+		GFF1022	0.28	+0.3
1,022,332	-		GFF1022	0.28	-0.9
1,022,383	-		GFF1022	0.35	-1.0
1,022,388	+		GFF1022	0.35	-1.6
1,022,388	+		GFF1022	0.35	-2.9
1,022,388	+		GFF1022	0.35	-0.3
1,022,388	+		GFF1022	0.35	+0.7
1,022,396	-		GFF1022	0.36	-0.6
1,022,396	-		GFF1022	0.36	-0.4
1,022,396	-		GFF1022	0.36	-1.0
1,022,396	-		GFF1022	0.36	+0.4
1,022,396	-		GFF1022	0.36	-1.4
1,022,396	-		GFF1022	0.36	-0.3
1,022,398	+		GFF1022	0.37	+0.7
1,022,398	+		GFF1022	0.37	-0.6
1,022,398	+		GFF1022	0.37	+0.2
1,022,398	+		GFF1022	0.37	+0.7
1,022,406	-		GFF1022	0.38	-2.3
1,022,406	-		GFF1022	0.38	-0.2
1,022,406	-		GFF1022	0.38	+0.0
1,022,408	+		GFF1022	0.38	-0.1
1,022,416	-		GFF1022	0.39	-1.7
1,022,416	-		GFF1022	0.39	+0.8
1,022,451	+		GFF1022	0.44	-1.4
1,022,456	-		GFF1022	0.44	+0.2
1,022,459	+		GFF1022	0.45	-0.7
1,022,469	+		GFF1022	0.46	+0.4
1,022,502	-		GFF1022	0.50	+0.4
1,022,502	-		GFF1022	0.50	-1.4
1,022,502	-		GFF1022	0.50	-2.8
1,022,502	-		GFF1022	0.50	-1.0
1,022,509	+		GFF1022	0.51	+1.0
1,022,509	+		GFF1022	0.51	+0.8
1,022,512	-		GFF1022	0.52	+0.4
1,022,512	-		GFF1022	0.52	+0.0
1,022,517	-		GFF1022	0.52	-0.4
1,022,541	+		GFF1022	0.55	+0.9
1,022,541	+		GFF1022	0.55	-1.4
1,022,541	+		GFF1022	0.55	+0.6
1,022,541	+		GFF1022	0.55	-1.0
1,022,541	+		GFF1022	0.55	+0.3
1,022,541	+		GFF1022	0.55	+1.1
1,022,541	+		GFF1022	0.55	-0.1
1,022,541	+		GFF1022	0.55	+0.5
1,022,549	-		GFF1022	0.57	-0.1
1,022,549	-		GFF1022	0.57	+0.0
1,022,549	-		GFF1022	0.57	+0.5
1,022,549	-		GFF1022	0.57	+0.1
1,022,549	-		GFF1022	0.57	-0.1
1,022,549	-		GFF1022	0.57	-0.1
1,022,549	-		GFF1022	0.57	+0.4
1,022,568	-		GFF1022	0.59	-1.9
1,022,604	+		GFF1022	0.64	+1.3
1,022,604	+		GFF1022	0.64	+1.1
1,022,612	-		GFF1022	0.65	-0.2
1,022,612	-		GFF1022	0.65	-1.6
1,022,617	-		GFF1022	0.65	-0.6
1,022,620	+		GFF1022	0.66	-0.3
1,022,650	+		GFF1022	0.70	-0.6
1,022,715	+		GFF1022	0.78	+0.3
1,022,730	+		GFF1022	0.80	+0.2
1,022,730	+		GFF1022	0.80	+0.6
1,022,730	+		GFF1022	0.80	-2.1
1,022,738	-		GFF1022	0.81	-0.2
1,022,738	-		GFF1022	0.81	-1.6
1,022,738	-		GFF1022	0.81	-0.4
1,022,753	+		GFF1022	0.83	+0.8
1,022,771	-		GFF1022	0.86	+0.4
1,022,792	+		GFF1022	0.89	-0.5
1,022,797	+		GFF1022	0.89	-1.3
1,022,800	-		GFF1022	0.90	+0.9
1,022,801	+		GFF1022	0.90	-0.8
1,022,805	-				+0.1
1,022,805	-				-0.4
1,022,814	+				-0.4
1,022,816	+				-0.3
1,022,833	+				+0.3
1,022,845	+				+0.0
1,022,872	+				-0.7
1,022,872	+				-1.7
1,022,873	-				+0.0
1,022,880	-				+0.1
1,022,880	-				-0.6
1,022,882	-				-0.4
1,022,885	-				-1.3
1,022,889	+				+0.1
1,022,903	+				+0.4
1,022,903	+				+0.9
1,022,903	+				-0.1
1,022,903	+				-1.3
1,022,911	-				+1.6
1,022,911	-				+0.3
1,022,911	-				-0.3
1,022,911	-				-0.3
1,022,984	-				-0.0
1,023,000	+				-1.3
1,023,001	+				-1.2
1,023,001	+				+0.4
1,023,009	-				+1.4
1,023,028	+		GFF1023	0.11	+0.7
1,023,028	+		GFF1023	0.11	+1.9
1,023,036	-		GFF1023	0.11	-1.3
1,023,048	+		GFF1023	0.12	-0.6
1,023,078	-		GFF1023	0.14	-1.3
1,023,078	-		GFF1023	0.14	-0.2
1,023,078	-		GFF1023	0.14	+0.4
1,023,083	+		GFF1023	0.15	+0.9
1,023,083	+		GFF1023	0.15	+0.9
1,023,083	+		GFF1023	0.15	-0.9
1,023,083	+		GFF1023	0.15	-0.4
1,023,083	+		GFF1023	0.15	-0.9
1,023,083	+		GFF1023	0.15	-1.2
1,023,091	-		GFF1023	0.15	-0.7
1,023,091	-		GFF1023	0.15	+0.4
1,023,091	-		GFF1023	0.15	+0.3
1,023,093	+		GFF1023	0.15	-0.5
1,023,093	+		GFF1023	0.15	+0.7
1,023,096	-		GFF1023	0.16	-0.6
1,023,126	+		GFF1023	0.18	-0.2
1,023,126	+		GFF1023	0.18	-1.3
1,023,134	-		GFF1023	0.18	-0.2
1,023,135	+		GFF1023	0.18	-2.9
1,023,156	-		GFF1023	0.20	-0.7
1,023,156	-		GFF1023	0.20	-0.9
1,023,167	+		GFF1023	0.21	-1.8
1,023,185	-		GFF1023	0.22	-2.6
1,023,192	+		GFF1023	0.22	+0.4
1,023,192	+		GFF1023	0.22	+0.3
1,023,192	+		GFF1023	0.22	+0.3
1,023,192	+		GFF1023	0.22	-0.3
1,023,192	+		GFF1023	0.22	-0.5
1,023,200	-		GFF1023	0.23	-1.4
1,023,200	-		GFF1023	0.23	-0.4
1,023,200	-		GFF1023	0.23	-1.4
1,023,210	+		GFF1023	0.24	+1.6
1,023,210	+		GFF1023	0.24	+0.7
1,023,218	-		GFF1023	0.24	-0.5
1,023,218	-		GFF1023	0.24	-0.2
1,023,218	-		GFF1023	0.24	+1.0
1,023,218	-		GFF1023	0.24	-0.1
1,023,238	+		GFF1023	0.26	-0.1
1,023,238	+		GFF1023	0.26	+1.1
1,023,245	+		GFF1023	0.26	+0.8
1,023,251	-		GFF1023	0.27	-0.0
1,023,253	-		GFF1023	0.27	+0.3
1,023,263	-		GFF1023	0.27	-0.1
1,023,265	+		GFF1023	0.28	+0.3
1,023,276	+		GFF1023	0.28	-0.8
1,023,276	+		GFF1023	0.28	-0.9
1,023,280	-		GFF1023	0.29	+0.1
1,023,284	-		GFF1023	0.29	-0.4
1,023,284	-		GFF1023	0.29	+0.1
1,023,331	+		GFF1023	0.32	-1.6
1,023,359	+		GFF1023	0.34	+0.4
1,023,367	-		GFF1023	0.35	-0.6
1,023,367	-		GFF1023	0.35	-2.0
1,023,369	+		GFF1023	0.35	+0.4
1,023,369	+		GFF1023	0.35	-1.1
1,023,371	+		GFF1023	0.35	+0.0
1,023,371	+		GFF1023	0.35	-0.8
1,023,371	+		GFF1023	0.35	-1.6
1,023,377	-		GFF1023	0.35	+0.6
1,023,379	-		GFF1023	0.36	-0.2
1,023,381	+		GFF1023	0.36	-1.0
1,023,381	+		GFF1023	0.36	+1.6
1,023,381	+		GFF1023	0.36	+0.6
1,023,381	+		GFF1023	0.36	-0.8
1,023,381	+		GFF1023	0.36	+0.8
1,023,381	+		GFF1023	0.36	+0.2
1,023,381	+		GFF1023	0.36	-0.8
1,023,381	+		GFF1023	0.36	-1.0
1,023,381	+		GFF1023	0.36	+0.1
1,023,381	+		GFF1023	0.36	+0.0
1,023,381	+		GFF1023	0.36	+0.3
1,023,381	+		GFF1023	0.36	-1.7
1,023,381	+		GFF1023	0.36	-1.1
1,023,381	+		GFF1023	0.36	-1.5
1,023,381	+		GFF1023	0.36	-0.3
1,023,381	+		GFF1023	0.36	+0.8
1,023,381	+		GFF1023	0.36	-0.0
1,023,381	+		GFF1023	0.36	-0.3
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