Strain Fitness in Sphingobium sp. HT1-2 around GFF4737

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,735,591	-		GFF4736	0.16	-1.0
4,735,602	+		GFF4736	0.17	+0.6
4,735,610	-		GFF4736	0.18	+0.8
4,735,616	+		GFF4736	0.19	-0.5
4,735,647	+		GFF4736	0.21	-0.1
4,735,657	+		GFF4736	0.22	+0.8
4,735,664	+		GFF4736	0.23	-0.4
4,735,664	+		GFF4736	0.23	-2.0
4,735,672	-		GFF4736	0.23	+0.3
4,735,688	-		GFF4736	0.25	-1.4
4,735,691	+		GFF4736	0.25	-0.5
4,735,692	+		GFF4736	0.25	-1.7
4,735,715	+		GFF4736	0.27	+0.6
4,735,722	+		GFF4736	0.28	-0.1
4,735,723	-		GFF4736	0.28	-0.5
4,735,727	+		GFF4736	0.28	+0.3
4,735,727	+		GFF4736	0.28	-0.1
4,735,727	+		GFF4736	0.28	-0.9
4,735,727	+		GFF4736	0.28	+0.2
4,735,735	-		GFF4736	0.29	+0.1
4,735,735	-		GFF4736	0.29	+0.2
4,735,759	+		GFF4736	0.31	-2.3
4,735,771	+		GFF4736	0.32	-0.6
4,735,785	+		GFF4736	0.33	-1.6
4,735,804	-		GFF4736	0.35	-1.8
4,735,805	+		GFF4736	0.35	-0.8
4,735,815	+		GFF4736	0.36	+0.4
4,735,815	+		GFF4736	0.36	+1.1
4,735,815	+		GFF4736	0.36	-0.3
4,735,820	+		GFF4736	0.36	+1.1
4,735,820	+		GFF4736	0.36	-0.8
4,735,820	+		GFF4736	0.36	+0.6
4,735,820	+		GFF4736	0.36	-1.2
4,735,828	-		GFF4736	0.37	-0.7
4,735,828	-		GFF4736	0.37	-0.7
4,735,828	-		GFF4736	0.37	-1.8
4,735,828	-		GFF4736	0.37	-0.1
4,735,828	-		GFF4736	0.37	-2.1
4,735,828	-		GFF4736	0.37	-2.0
4,735,828	-		GFF4736	0.37	+1.0
4,735,837	+		GFF4736	0.38	+0.9
4,735,837	+		GFF4736	0.38	+0.3
4,735,837	+		GFF4736	0.38	+0.6
4,735,845	-		GFF4736	0.38	+0.4
4,735,845	-		GFF4736	0.38	-0.6
4,735,858	-		GFF4736	0.39	+0.2
4,735,901	+		GFF4736	0.43	+0.9
4,735,902	-		GFF4736	0.43	-0.3
4,735,911	+		GFF4736	0.44	+1.2
4,735,924	-		GFF4736	0.45	-0.6
4,735,926	-		GFF4736	0.45	-1.7
4,735,926	-		GFF4736	0.45	-1.1
4,735,928	+		GFF4736	0.45	-0.7
4,735,928	+		GFF4736	0.45	+0.6
4,735,928	+		GFF4736	0.45	-0.6
4,735,938	+		GFF4736	0.46	+0.6
4,735,938	+		GFF4736	0.46	+0.8
4,735,946	-		GFF4736	0.47	+1.0
4,735,958	+		GFF4736	0.48	+0.3
4,735,963	+		GFF4736	0.48	+0.5
4,735,963	+		GFF4736	0.48	+0.3
4,735,963	+		GFF4736	0.48	+0.3
4,735,971	-		GFF4736	0.49	-0.7
4,735,976	+		GFF4736	0.49	-0.3
4,735,976	+		GFF4736	0.49	+0.6
4,735,976	+		GFF4736	0.49	+0.7
4,735,976	+		GFF4736	0.49	-0.5
4,735,976	+		GFF4736	0.49	+0.3
4,735,976	+		GFF4736	0.49	-0.4
4,735,976	+		GFF4736	0.49	-0.3
4,735,976	+		GFF4736	0.49	-1.2
4,735,979	-		GFF4736	0.50	-0.5
4,735,984	-		GFF4736	0.50	-0.5
4,735,984	-		GFF4736	0.50	+0.5
4,735,984	-		GFF4736	0.50	+1.1
4,736,027	-		GFF4736	0.54	-0.3
4,736,027	-		GFF4736	0.54	+0.7
4,736,027	-		GFF4736	0.54	-0.4
4,736,033	+		GFF4736	0.54	-0.5
4,736,052	+		GFF4736	0.56	+0.4
4,736,054	-		GFF4736	0.56	-0.3
4,736,070	-		GFF4736	0.58	+0.3
4,736,106	-		GFF4736	0.61	+1.2
4,736,111	+		GFF4736	0.61	-0.7
4,736,119	-		GFF4736	0.62	-1.6
4,736,120	+		GFF4736	0.62	-1.0
4,736,125	+		GFF4736	0.62	-1.1
4,736,125	+		GFF4736	0.62	-1.5
4,736,127	+		GFF4736	0.62	+1.6
4,736,130	+		GFF4736	0.63	-0.6
4,736,133	-		GFF4736	0.63	+1.0
4,736,133	-		GFF4736	0.63	-1.0
4,736,159	-		GFF4736	0.65	-0.2
4,736,163	+		GFF4736	0.66	-0.3
4,736,167	+		GFF4736	0.66	-0.1
4,736,167	+		GFF4736	0.66	+0.1
4,736,167	+		GFF4736	0.66	+1.1
4,736,167	+		GFF4736	0.66	+1.4
4,736,167	+		GFF4736	0.66	+1.0
4,736,171	-		GFF4736	0.66	+0.5
4,736,177	+		GFF4736	0.67	+0.1
4,736,177	+		GFF4736	0.67	+0.4
4,736,177	+		GFF4736	0.67	-1.5
4,736,177	+		GFF4736	0.67	+0.3
4,736,177	+		GFF4736	0.67	+0.7
4,736,177	+		GFF4736	0.67	+1.5
4,736,177	+		GFF4736	0.67	+0.4
4,736,177	+		GFF4736	0.67	+0.1
4,736,177	+		GFF4736	0.67	+0.2
4,736,177	+		GFF4736	0.67	+0.4
4,736,177	+		GFF4736	0.67	+0.1
4,736,177	+		GFF4736	0.67	+0.0
4,736,177	+		GFF4736	0.67	-0.3
4,736,177	+		GFF4736	0.67	-0.9
4,736,185	-		GFF4736	0.67	+1.1
4,736,185	-		GFF4736	0.67	-0.4
4,736,185	-		GFF4736	0.67	-2.1
4,736,185	-		GFF4736	0.67	-2.6
4,736,185	-		GFF4736	0.67	+0.4
4,736,185	-		GFF4736	0.67	-0.5
4,736,185	-		GFF4736	0.67	-0.1
4,736,185	-		GFF4736	0.67	+1.4
4,736,185	-		GFF4736	0.67	+0.1
4,736,185	-		GFF4736	0.67	+1.0
4,736,185	-		GFF4736	0.67	+0.5
4,736,195	-		GFF4736	0.68	+0.3
4,736,211	+		GFF4736	0.70	+0.3
4,736,211	+		GFF4736	0.70	-2.2
4,736,225	-		GFF4736	0.71	+0.0
4,736,229	-		GFF4736	0.71	+1.2
4,736,242	+		GFF4736	0.72	+1.4
4,736,243	+		GFF4736	0.72	+0.9
4,736,243	+		GFF4736	0.72	-1.1
4,736,243	+		GFF4736	0.72	+0.2
4,736,243	+		GFF4736	0.72	-0.3
4,736,245	-		GFF4736	0.73	-2.5
4,736,251	-		GFF4736	0.73	-0.8
4,736,251	-		GFF4736	0.73	+0.1
4,736,279	-		GFF4736	0.76	-0.1
4,736,284	-		GFF4736	0.76	-1.0
4,736,287	+		GFF4736	0.76	+0.8
4,736,287	+		GFF4736	0.76	+1.6
4,736,295	-		GFF4736	0.77	+0.2
4,736,295	-		GFF4736	0.77	-0.5
4,736,295	-		GFF4736	0.77	+1.0
4,736,306	-		GFF4736	0.78	-1.7
4,736,306	-		GFF4736	0.78	+1.6
4,736,310	-		GFF4736	0.78	+0.9
4,736,313	+		GFF4736	0.78	+1.0
4,736,315	+		GFF4736	0.79	-0.6
4,736,315	+		GFF4736	0.79	+0.0
4,736,315	+		GFF4736	0.79	+0.5
4,736,323	-		GFF4736	0.79	-1.1
4,736,354	+		GFF4736	0.82	-0.5
4,736,362	-		GFF4736	0.83	+0.9
4,736,369	+		GFF4736	0.83	+0.2
4,736,369	+		GFF4736	0.83	-0.3
4,736,371	+		GFF4736	0.83	+0.5
4,736,371	+		GFF4736	0.83	+0.2
4,736,377	-		GFF4736	0.84	+1.2
4,736,377	-		GFF4736	0.84	-0.0
4,736,377	-		GFF4736	0.84	-3.2
4,736,379	-		GFF4736	0.84	-1.3
4,736,379	-		GFF4736	0.84	+0.7
4,736,391	+		GFF4736	0.85	+1.0
4,736,418	-		GFF4736	0.87	+0.5
4,736,444	-		GFF4736	0.90	-1.6
4,736,449	-				-0.7
4,736,528	+				-0.0
4,736,538	+				+0.3
4,736,538	+				+1.2
4,736,545	+				+0.2
4,736,545	+				-1.8
4,736,545	+				+0.4
4,736,546	-				+0.4
4,736,546	-				-0.1
4,736,553	-				-0.3
4,736,586	+				+0.3
4,736,596	+				-0.8
4,736,596	+				-0.7
4,736,607	-				-1.2
4,736,643	+				-0.2
4,736,643	+				-1.8
4,736,651	-				+0.2
4,736,655	+				+0.2
4,736,661	+				-0.6
4,736,663	+				-0.3
4,736,663	+				+0.3
4,736,669	-				-0.4
4,736,672	+				-1.5
4,736,672	+				-0.6
4,736,672	+				+0.6
4,736,672	+				-0.5
4,736,672	+				+1.7
4,736,690	-		GFF4737	0.11	-0.3
4,736,722	-		GFF4737	0.14	-0.3
4,736,724	-		GFF4737	0.15	-0.8
4,736,732	-		GFF4737	0.15	-0.4
4,736,744	-		GFF4737	0.16	-0.5
4,736,759	-		GFF4737	0.18	+0.2
4,736,780	-		GFF4737	0.19	+0.7
4,736,788	+		GFF4737	0.20	+0.6
4,736,798	+		GFF4737	0.21	-0.7
4,736,806	-		GFF4737	0.22	-0.3
4,736,806	-		GFF4737	0.22	-0.3
4,736,806	-		GFF4737	0.22	-0.0
4,736,817	-		GFF4737	0.23	+0.8
4,736,822	-		GFF4737	0.23	-0.4
4,736,822	-		GFF4737	0.23	-0.2
4,736,856	+		GFF4737	0.26	+1.4
4,736,865	-		GFF4737	0.27	-0.1
4,736,878	+		GFF4737	0.28	+1.1
4,736,878	+		GFF4737	0.28	+0.3
4,736,878	+		GFF4737	0.28	+0.1
4,736,878	+		GFF4737	0.28	+0.7
4,736,886	-		GFF4737	0.29	+0.5
4,736,886	-		GFF4737	0.29	+0.1
4,736,886	-		GFF4737	0.29	-0.3
4,736,895	+		GFF4737	0.30	-0.3
4,736,895	+		GFF4737	0.30	+0.7
4,736,902	+		GFF4737	0.30	-0.4
4,736,910	-		GFF4737	0.31	+0.2
4,736,916	-		GFF4737	0.31	-0.7
4,736,942	+		GFF4737	0.34	+0.3
4,736,956	+		GFF4737	0.35	+0.4
4,736,957	+		GFF4737	0.35	-0.2
4,736,965	-		GFF4737	0.36	-0.5
4,737,006	+		GFF4737	0.39	-2.1
4,737,008	+		GFF4737	0.40	-0.7
4,737,009	-		GFF4737	0.40	-1.1
4,737,018	+		GFF4737	0.40	+1.3
4,737,018	+		GFF4737	0.40	-0.7
4,737,026	-		GFF4737	0.41	-0.5
4,737,026	-		GFF4737	0.41	+1.4
4,737,026	-		GFF4737	0.41	-0.8
4,737,032	+		GFF4737	0.42	-1.5
4,737,032	+		GFF4737	0.42	+0.5
4,737,032	+		GFF4737	0.42	-1.7
4,737,032	+		GFF4737	0.42	+0.2
4,737,035	-		GFF4737	0.42	-0.8
4,737,037	+		GFF4737	0.42	+0.3
4,737,037	+		GFF4737	0.42	-0.6
4,737,040	-		GFF4737	0.42	-0.3
4,737,040	-		GFF4737	0.42	-0.2
4,737,040	-		GFF4737	0.42	-1.8
4,737,061	+		GFF4737	0.44	-1.3
4,737,063	+		GFF4737	0.44	+0.3
4,737,063	+		GFF4737	0.44	+1.4
4,737,063	+		GFF4737	0.44	-0.3
4,737,063	+		GFF4737	0.44	+0.5
4,737,063	+		GFF4737	0.44	-0.1
4,737,063	+		GFF4737	0.44	+0.8
4,737,071	-		GFF4737	0.45	-1.0
4,737,071	-		GFF4737	0.45	+0.7
4,737,079	+		GFF4737	0.46	-0.5
4,737,079	+		GFF4737	0.46	-2.0
4,737,079	+		GFF4737	0.46	+0.7
4,737,079	+		GFF4737	0.46	+1.0
4,737,079	+		GFF4737	0.46	-0.2
4,737,079	+		GFF4737	0.46	-0.1
4,737,079	+		GFF4737	0.46	-1.0
4,737,079	+		GFF4737	0.46	-0.3
4,737,087	-		GFF4737	0.47	-0.1
4,737,087	-		GFF4737	0.47	-1.0
4,737,087	-		GFF4737	0.47	+1.1
4,737,087	-		GFF4737	0.47	+0.3
4,737,087	-		GFF4737	0.47	-2.0
4,737,096	+		GFF4737	0.47	+1.0
4,737,096	+		GFF4737	0.47	-0.6
4,737,102	-		GFF4737	0.48	+1.1
4,737,124	+		GFF4737	0.50	+0.8
4,737,132	-		GFF4737	0.51	-0.1
4,737,133	+		GFF4737	0.51	+0.2
4,737,133	+		GFF4737	0.51	+1.1
4,737,142	+		GFF4737	0.51	+0.7
4,737,156	+		GFF4737	0.53	+0.1
4,737,158	+		GFF4737	0.53	-0.6
4,737,158	+		GFF4737	0.53	-0.6
4,737,158	+		GFF4737	0.53	+0.3
4,737,158	+		GFF4737	0.53	+0.4
4,737,158	+		GFF4737	0.53	-0.6
4,737,158	+		GFF4737	0.53	-1.5
4,737,166	-		GFF4737	0.54	+1.1
4,737,166	-		GFF4737	0.54	+0.3
4,737,166	-		GFF4737	0.54	-0.4
4,737,166	-		GFF4737	0.54	-0.4
4,737,166	-		GFF4737	0.54	+0.9
4,737,168	+		GFF4737	0.54	-0.8
4,737,176	-		GFF4737	0.54	-0.1
4,737,185	+		GFF4737	0.55	-0.6
4,737,186	-		GFF4737	0.55	-0.4
4,737,190	+		GFF4737	0.56	-1.5
4,737,200	+		GFF4737	0.57	-1.7
4,737,206	+		GFF4737	0.57	-1.0
4,737,208	-		GFF4737	0.57	+0.5
4,737,215	+		GFF4737	0.58	-1.2
4,737,215	+		GFF4737	0.58	-0.4
4,737,215	+		GFF4737	0.58	+0.4
4,737,218	-		GFF4737	0.58	-0.8
4,737,220	+		GFF4737	0.58	-0.1
4,737,220	+		GFF4737	0.58	-1.1
4,737,220	+		GFF4737	0.58	-0.3
4,737,223	-		GFF4737	0.59	+0.4
4,737,228	-		GFF4737	0.59	+0.4
4,737,268	+		GFF4737	0.63	+0.2
4,737,281	+		GFF4737	0.64	-0.6
4,737,289	+		GFF4737	0.64	+0.6
4,737,291	-		GFF4737	0.65	-0.3
4,737,356	-		GFF4737	0.70	+0.3
4,737,386	-		GFF4737	0.73	-0.3
4,737,386	-		GFF4737	0.73	+1.2
4,737,386	-		GFF4737	0.73	+0.7
4,737,386	-		GFF4737	0.73	-0.8
4,737,386	-		GFF4737	0.73	+0.5
4,737,395	-		GFF4737	0.74	+0.9
4,737,395	-		GFF4737	0.74	-2.0
4,737,399	+		GFF4737	0.74	-0.1
4,737,417	+		GFF4737	0.76	+0.3
4,737,417	-		GFF4737	0.76	-1.0
4,737,430	+		GFF4737	0.77	-0.2
4,737,447	-		GFF4737	0.78	+0.7
4,737,449	-		GFF4737	0.79	-2.8
4,737,454	+		GFF4737	0.79	+0.6
4,737,454	+		GFF4737	0.79	-0.8
4,737,454	+		GFF4737	0.79	+0.2
4,737,459	+		GFF4737	0.79	+1.0
4,737,459	+		GFF4737	0.79	-0.8
4,737,459	+		GFF4737	0.79	-0.8
4,737,462	-		GFF4737	0.80	-0.7
4,737,462	-		GFF4737	0.80	-0.0
4,737,474	+		GFF4737	0.81	-0.3
4,737,486	-		GFF4737	0.82	-1.0
4,737,488	+		GFF4737	0.82	-1.2
4,737,488	+		GFF4737	0.82	-0.8
4,737,519	-		GFF4737	0.85	-1.3
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