Strain Fitness in Sphingobium sp. HT1-2 around GFF4736

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,734,402	-				-0.9
4,734,402	-				-2.4
4,734,402	-				-0.3
4,734,402	-				+0.8
4,734,402	-				+0.0
4,734,406	-				-0.3
4,734,487	+		GFF4735	0.12	-0.8
4,734,487	+		GFF4735	0.12	+0.3
4,734,487	+		GFF4735	0.12	-1.0
4,734,489	-		GFF4735	0.12	+1.2
4,734,495	-		GFF4735	0.12	+0.0
4,734,497	+		GFF4735	0.13	+0.6
4,734,502	+		GFF4735	0.13	+0.5
4,734,521	+		GFF4735	0.15	-1.3
4,734,521	+		GFF4735	0.15	-1.0
4,734,521	+		GFF4735	0.15	-0.0
4,734,521	+		GFF4735	0.15	-0.8
4,734,521	+		GFF4735	0.15	-1.1
4,734,527	+		GFF4735	0.16	+0.7
4,734,527	+		GFF4735	0.16	-1.6
4,734,529	-		GFF4735	0.16	-0.3
4,734,529	-		GFF4735	0.16	+0.5
4,734,529	-		GFF4735	0.16	+0.6
4,734,529	-		GFF4735	0.16	+0.3
4,734,529	-		GFF4735	0.16	+0.1
4,734,534	+		GFF4735	0.16	+0.0
4,734,542	-		GFF4735	0.17	+0.9
4,734,566	+		GFF4735	0.19	-0.3
4,734,586	-		GFF4735	0.21	-1.3
4,734,586	-		GFF4735	0.21	+0.8
4,734,586	-		GFF4735	0.21	+1.4
4,734,597	+		GFF4735	0.22	-0.1
4,734,616	+		GFF4735	0.24	+0.3
4,734,621	+		GFF4735	0.25	-0.3
4,734,624	+		GFF4735	0.25	-0.2
4,734,629	+		GFF4735	0.25	+0.3
4,734,629	+		GFF4735	0.25	+0.6
4,734,629	+		GFF4735	0.25	-0.0
4,734,629	+		GFF4735	0.25	+0.3
4,734,629	+		GFF4735	0.25	-0.4
4,734,629	+		GFF4735	0.25	-1.8
4,734,632	-		GFF4735	0.26	-1.1
4,734,632	-		GFF4735	0.26	+0.1
4,734,636	+		GFF4735	0.26	+0.8
4,734,637	-		GFF4735	0.26	-0.2
4,734,637	-		GFF4735	0.26	+0.2
4,734,637	-		GFF4735	0.26	+1.1
4,734,646	+		GFF4735	0.27	+0.4
4,734,654	-		GFF4735	0.28	-0.5
4,734,664	+		GFF4735	0.29	-0.7
4,734,664	+		GFF4735	0.29	-0.3
4,734,664	+		GFF4735	0.29	+0.7
4,734,669	+		GFF4735	0.29	-0.1
4,734,672	-		GFF4735	0.29	+1.1
4,734,672	-		GFF4735	0.29	+0.3
4,734,672	-		GFF4735	0.29	-0.0
4,734,674	+		GFF4735	0.30	+0.9
4,734,682	-		GFF4735	0.30	-0.4
4,734,682	-		GFF4735	0.30	+0.3
4,734,701	+		GFF4735	0.32	+1.3
4,734,701	+		GFF4735	0.32	-0.5
4,734,701	+		GFF4735	0.32	+0.7
4,734,710	+		GFF4735	0.33	-0.4
4,734,718	-		GFF4735	0.34	-0.8
4,734,719	-		GFF4735	0.34	-0.4
4,734,732	+		GFF4735	0.35	-0.2
4,734,748	+		GFF4735	0.37	-1.3
4,734,753	+		GFF4735	0.37	+0.3
4,734,762	-		GFF4735	0.38	+0.3
4,734,770	-		GFF4735	0.39	-0.3
4,734,800	+		GFF4735	0.42	-0.1
4,734,802	+		GFF4735	0.42	+0.7
4,734,802	+		GFF4735	0.42	-0.6
4,734,813	-		GFF4735	0.43	+0.2
4,734,826	+		GFF4735	0.44	-0.4
4,734,826	+		GFF4735	0.44	-0.9
4,734,826	+		GFF4735	0.44	-0.3
4,734,826	+		GFF4735	0.44	-0.8
4,734,836	+		GFF4735	0.45	+0.3
4,734,836	+		GFF4735	0.45	-0.1
4,734,879	+		GFF4735	0.49	+0.2
4,734,887	-		GFF4735	0.50	+0.8
4,734,897	-		GFF4735	0.51	+1.0
4,734,935	+		GFF4735	0.55	+0.4
4,734,935	+		GFF4735	0.55	+0.7
4,734,935	+		GFF4735	0.55	+1.2
4,734,954	+		GFF4735	0.57	-1.3
4,734,983	-		GFF4735	0.59	+1.0
4,735,001	+		GFF4735	0.61	-0.1
4,735,069	+		GFF4735	0.68	-0.1
4,735,077	-		GFF4735	0.68	+0.8
4,735,111	+		GFF4735	0.72	-0.2
4,735,139	-		GFF4735	0.74	+0.1
4,735,141	+		GFF4735	0.75	-0.5
4,735,147	+		GFF4735	0.75	-0.1
4,735,147	+		GFF4735	0.75	-2.7
4,735,147	+		GFF4735	0.75	+0.0
4,735,147	+		GFF4735	0.75	+0.4
4,735,147	+		GFF4735	0.75	+0.1
4,735,147	+		GFF4735	0.75	-1.2
4,735,147	+		GFF4735	0.75	+0.1
4,735,149	-		GFF4735	0.75	+0.9
4,735,149	-		GFF4735	0.75	+0.3
4,735,155	-		GFF4735	0.76	+0.9
4,735,155	-		GFF4735	0.76	-0.4
4,735,159	+		GFF4735	0.76	+0.3
4,735,167	-		GFF4735	0.77	-0.7
4,735,167	-		GFF4735	0.77	-2.3
4,735,169	+		GFF4735	0.77	+0.7
4,735,169	+		GFF4735	0.77	-0.8
4,735,172	-		GFF4735	0.78	-0.4
4,735,189	+		GFF4735	0.79	+0.7
4,735,193	+		GFF4735	0.80	+0.0
4,735,194	+		GFF4735	0.80	-0.8
4,735,194	+		GFF4735	0.80	-1.0
4,735,194	+		GFF4735	0.80	-0.5
4,735,201	-		GFF4735	0.80	-0.3
4,735,201	-		GFF4735	0.80	+1.1
4,735,210	+		GFF4735	0.81	-2.6
4,735,247	+		GFF4735	0.85	+0.8
4,735,253	-		GFF4735	0.85	+0.6
4,735,255	-		GFF4735	0.86	-0.0
4,735,255	-		GFF4735	0.86	+0.6
4,735,299	-		GFF4735	0.90	-0.0
4,735,301	+				+0.3
4,735,306	+				-2.5
4,735,306	+				+0.3
4,735,306	+				-0.0
4,735,306	+				+0.4
4,735,306	+				+0.3
4,735,306	+				-1.4
4,735,314	-				+0.7
4,735,314	-				-0.5
4,735,314	-				+0.6
4,735,314	-				+0.0
4,735,314	-				-0.4
4,735,314	-				+0.3
4,735,314	-				+0.8
4,735,321	+				-0.4
4,735,321	+				-0.5
4,735,329	-				-2.3
4,735,329	-				+1.0
4,735,329	-				+0.3
4,735,342	-				+0.9
4,735,353	-				-0.3
4,735,383	+				+0.4
4,735,393	-				-0.3
4,735,403	+				+0.2
4,735,410	-				-0.6
4,735,410	-				-0.2
4,735,411	-				+0.6
4,735,429	+				-0.0
4,735,439	+				-0.4
4,735,455	+				-0.5
4,735,465	-				-0.0
4,735,498	+				-0.3
4,735,522	-		GFF4736	0.10	-0.4
4,735,535	+		GFF4736	0.12	-0.3
4,735,537	-		GFF4736	0.12	+0.2
4,735,543	-		GFF4736	0.12	+1.3
4,735,591	-		GFF4736	0.16	-1.0
4,735,602	+		GFF4736	0.17	+0.6
4,735,610	-		GFF4736	0.18	+0.8
4,735,616	+		GFF4736	0.19	-0.5
4,735,647	+		GFF4736	0.21	-0.1
4,735,657	+		GFF4736	0.22	+0.8
4,735,664	+		GFF4736	0.23	-0.4
4,735,664	+		GFF4736	0.23	-2.0
4,735,672	-		GFF4736	0.23	+0.3
4,735,688	-		GFF4736	0.25	-1.4
4,735,691	+		GFF4736	0.25	-0.5
4,735,692	+		GFF4736	0.25	-1.7
4,735,715	+		GFF4736	0.27	+0.6
4,735,722	+		GFF4736	0.28	-0.1
4,735,723	-		GFF4736	0.28	-0.5
4,735,727	+		GFF4736	0.28	+0.3
4,735,727	+		GFF4736	0.28	-0.1
4,735,727	+		GFF4736	0.28	-0.9
4,735,727	+		GFF4736	0.28	+0.2
4,735,735	-		GFF4736	0.29	+0.1
4,735,735	-		GFF4736	0.29	+0.2
4,735,759	+		GFF4736	0.31	-2.3
4,735,771	+		GFF4736	0.32	-0.6
4,735,785	+		GFF4736	0.33	-1.6
4,735,804	-		GFF4736	0.35	-1.8
4,735,805	+		GFF4736	0.35	-0.8
4,735,815	+		GFF4736	0.36	+0.4
4,735,815	+		GFF4736	0.36	+1.1
4,735,815	+		GFF4736	0.36	-0.3
4,735,820	+		GFF4736	0.36	+1.1
4,735,820	+		GFF4736	0.36	-0.8
4,735,820	+		GFF4736	0.36	+0.6
4,735,820	+		GFF4736	0.36	-1.2
4,735,828	-		GFF4736	0.37	-0.7
4,735,828	-		GFF4736	0.37	-0.7
4,735,828	-		GFF4736	0.37	-1.8
4,735,828	-		GFF4736	0.37	-0.1
4,735,828	-		GFF4736	0.37	-2.1
4,735,828	-		GFF4736	0.37	-2.0
4,735,828	-		GFF4736	0.37	+1.0
4,735,837	+		GFF4736	0.38	+0.9
4,735,837	+		GFF4736	0.38	+0.3
4,735,837	+		GFF4736	0.38	+0.6
4,735,845	-		GFF4736	0.38	+0.4
4,735,845	-		GFF4736	0.38	-0.6
4,735,858	-		GFF4736	0.39	+0.2
4,735,901	+		GFF4736	0.43	+0.9
4,735,902	-		GFF4736	0.43	-0.3
4,735,911	+		GFF4736	0.44	+1.2
4,735,924	-		GFF4736	0.45	-0.6
4,735,926	-		GFF4736	0.45	-1.7
4,735,926	-		GFF4736	0.45	-1.1
4,735,928	+		GFF4736	0.45	-0.7
4,735,928	+		GFF4736	0.45	+0.6
4,735,928	+		GFF4736	0.45	-0.6
4,735,938	+		GFF4736	0.46	+0.6
4,735,938	+		GFF4736	0.46	+0.8
4,735,946	-		GFF4736	0.47	+1.0
4,735,958	+		GFF4736	0.48	+0.3
4,735,963	+		GFF4736	0.48	+0.5
4,735,963	+		GFF4736	0.48	+0.3
4,735,963	+		GFF4736	0.48	+0.3
4,735,971	-		GFF4736	0.49	-0.7
4,735,976	+		GFF4736	0.49	-0.3
4,735,976	+		GFF4736	0.49	+0.6
4,735,976	+		GFF4736	0.49	+0.7
4,735,976	+		GFF4736	0.49	-0.5
4,735,976	+		GFF4736	0.49	+0.3
4,735,976	+		GFF4736	0.49	-0.4
4,735,976	+		GFF4736	0.49	-0.3
4,735,976	+		GFF4736	0.49	-1.2
4,735,979	-		GFF4736	0.50	-0.5
4,735,984	-		GFF4736	0.50	-0.5
4,735,984	-		GFF4736	0.50	+0.5
4,735,984	-		GFF4736	0.50	+1.1
4,736,027	-		GFF4736	0.54	-0.3
4,736,027	-		GFF4736	0.54	+0.7
4,736,027	-		GFF4736	0.54	-0.4
4,736,033	+		GFF4736	0.54	-0.5
4,736,052	+		GFF4736	0.56	+0.4
4,736,054	-		GFF4736	0.56	-0.3
4,736,070	-		GFF4736	0.58	+0.3
4,736,106	-		GFF4736	0.61	+1.2
4,736,111	+		GFF4736	0.61	-0.7
4,736,119	-		GFF4736	0.62	-1.6
4,736,120	+		GFF4736	0.62	-1.0
4,736,125	+		GFF4736	0.62	-1.1
4,736,125	+		GFF4736	0.62	-1.5
4,736,127	+		GFF4736	0.62	+1.6
4,736,130	+		GFF4736	0.63	-0.6
4,736,133	-		GFF4736	0.63	+1.0
4,736,133	-		GFF4736	0.63	-1.0
4,736,159	-		GFF4736	0.65	-0.2
4,736,163	+		GFF4736	0.66	-0.3
4,736,167	+		GFF4736	0.66	-0.1
4,736,167	+		GFF4736	0.66	+0.1
4,736,167	+		GFF4736	0.66	+1.1
4,736,167	+		GFF4736	0.66	+1.4
4,736,167	+		GFF4736	0.66	+1.0
4,736,171	-		GFF4736	0.66	+0.5
4,736,177	+		GFF4736	0.67	+0.1
4,736,177	+		GFF4736	0.67	+0.4
4,736,177	+		GFF4736	0.67	-1.5
4,736,177	+		GFF4736	0.67	+0.3
4,736,177	+		GFF4736	0.67	+0.7
4,736,177	+		GFF4736	0.67	+1.5
4,736,177	+		GFF4736	0.67	+0.4
4,736,177	+		GFF4736	0.67	+0.1
4,736,177	+		GFF4736	0.67	+0.2
4,736,177	+		GFF4736	0.67	+0.4
4,736,177	+		GFF4736	0.67	+0.1
4,736,177	+		GFF4736	0.67	+0.0
4,736,177	+		GFF4736	0.67	-0.3
4,736,177	+		GFF4736	0.67	-0.9
4,736,185	-		GFF4736	0.67	+1.1
4,736,185	-		GFF4736	0.67	-0.4
4,736,185	-		GFF4736	0.67	-2.1
4,736,185	-		GFF4736	0.67	-2.6
4,736,185	-		GFF4736	0.67	+0.4
4,736,185	-		GFF4736	0.67	-0.5
4,736,185	-		GFF4736	0.67	-0.1
4,736,185	-		GFF4736	0.67	+1.4
4,736,185	-		GFF4736	0.67	+0.1
4,736,185	-		GFF4736	0.67	+1.0
4,736,185	-		GFF4736	0.67	+0.5
4,736,195	-		GFF4736	0.68	+0.3
4,736,211	+		GFF4736	0.70	+0.3
4,736,211	+		GFF4736	0.70	-2.2
4,736,225	-		GFF4736	0.71	+0.0
4,736,229	-		GFF4736	0.71	+1.2
4,736,242	+		GFF4736	0.72	+1.4
4,736,243	+		GFF4736	0.72	+0.9
4,736,243	+		GFF4736	0.72	-1.1
4,736,243	+		GFF4736	0.72	+0.2
4,736,243	+		GFF4736	0.72	-0.3
4,736,245	-		GFF4736	0.73	-2.5
4,736,251	-		GFF4736	0.73	-0.8
4,736,251	-		GFF4736	0.73	+0.1
4,736,279	-		GFF4736	0.76	-0.1
4,736,284	-		GFF4736	0.76	-1.0
4,736,287	+		GFF4736	0.76	+0.8
4,736,287	+		GFF4736	0.76	+1.6
4,736,295	-		GFF4736	0.77	+0.2
4,736,295	-		GFF4736	0.77	-0.5
4,736,295	-		GFF4736	0.77	+1.0
4,736,306	-		GFF4736	0.78	-1.7
4,736,306	-		GFF4736	0.78	+1.6
4,736,310	-		GFF4736	0.78	+0.9
4,736,313	+		GFF4736	0.78	+1.0
4,736,315	+		GFF4736	0.79	-0.6
4,736,315	+		GFF4736	0.79	+0.0
4,736,315	+		GFF4736	0.79	+0.5
4,736,323	-		GFF4736	0.79	-1.1
4,736,354	+		GFF4736	0.82	-0.5
4,736,362	-		GFF4736	0.83	+0.9
4,736,369	+		GFF4736	0.83	+0.2
4,736,369	+		GFF4736	0.83	-0.3
4,736,371	+		GFF4736	0.83	+0.5
4,736,371	+		GFF4736	0.83	+0.2
4,736,377	-		GFF4736	0.84	+1.2
4,736,377	-		GFF4736	0.84	-0.0
4,736,377	-		GFF4736	0.84	-3.2
4,736,379	-		GFF4736	0.84	-1.3
4,736,379	-		GFF4736	0.84	+0.7
4,736,391	+		GFF4736	0.85	+1.0
4,736,418	-		GFF4736	0.87	+0.5
4,736,444	-		GFF4736	0.90	-1.6
4,736,449	-				-0.7
4,736,528	+				-0.0
4,736,538	+				+0.3
4,736,538	+				+1.2
4,736,545	+				+0.2
4,736,545	+				-1.8
4,736,545	+				+0.4
4,736,546	-				+0.4
4,736,546	-				-0.1
4,736,553	-				-0.3
4,736,586	+				+0.3
4,736,596	+				-0.8
4,736,596	+				-0.7
4,736,607	-				-1.2
4,736,643	+				-0.2
4,736,643	+				-1.8
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