Strain Fitness in Sphingobium sp. HT1-2 around GFF2702

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,721,569	-		GFF2701	0.24	-0.4
2,721,575	+		GFF2701	0.24	+0.7
2,721,575	+		GFF2701	0.24	+0.2
2,721,575	+		GFF2701	0.24	-0.2
2,721,575	+		GFF2701	0.24	+0.3
2,721,575	+		GFF2701	0.24	-0.7
2,721,575	+		GFF2701	0.24	-0.1
2,721,575	+		GFF2701	0.24	+0.1
2,721,575	+		GFF2701	0.24	-0.1
2,721,575	+		GFF2701	0.24	-2.0
2,721,575	+		GFF2701	0.24	-1.3
2,721,575	+		GFF2701	0.24	-1.0
2,721,575	+		GFF2701	0.24	+0.4
2,721,575	+		GFF2701	0.24	+1.0
2,721,575	+		GFF2701	0.24	+0.2
2,721,575	+		GFF2701	0.24	-1.9
2,721,575	+		GFF2701	0.24	+1.7
2,721,583	-		GFF2701	0.25	+0.4
2,721,583	-		GFF2701	0.25	-1.2
2,721,583	-		GFF2701	0.25	+0.9
2,721,583	-		GFF2701	0.25	+0.2
2,721,583	-		GFF2701	0.25	+1.0
2,721,583	-		GFF2701	0.25	+1.1
2,721,583	-		GFF2701	0.25	-0.2
2,721,583	-		GFF2701	0.25	+0.9
2,721,583	-		GFF2701	0.25	-0.7
2,721,583	-		GFF2701	0.25	-0.3
2,721,583	-		GFF2701	0.25	-0.1
2,721,583	-		GFF2701	0.25	-0.1
2,721,583	-		GFF2701	0.25	-0.8
2,721,583	-		GFF2701	0.25	-1.1
2,721,583	-		GFF2701	0.25	+1.5
2,721,599	+		GFF2701	0.27	-1.0
2,721,600	-		GFF2701	0.27	-0.6
2,721,635	+		GFF2701	0.31	-0.5
2,721,641	+		GFF2701	0.31	+1.9
2,721,673	+		GFF2701	0.35	-0.9
2,721,676	-		GFF2701	0.35	-1.4
2,721,676	-		GFF2701	0.35	-1.1
2,721,681	-		GFF2701	0.35	-0.1
2,721,704	-		GFF2701	0.38	-0.5
2,721,718	+		GFF2701	0.39	-1.8
2,721,718	+		GFF2701	0.39	+1.4
2,721,718	+		GFF2701	0.39	+1.0
2,721,726	-		GFF2701	0.40	+1.1
2,721,726	-		GFF2701	0.40	-2.0
2,721,749	+		GFF2701	0.43	+0.2
2,721,766	+		GFF2701	0.44	+0.6
2,721,778	+		GFF2701	0.46	-0.1
2,721,813	-		GFF2701	0.49	-0.9
2,721,813	-		GFF2701	0.49	-2.3
2,721,813	-		GFF2701	0.49	+0.1
2,721,825	+		GFF2701	0.51	-0.7
2,721,831	-		GFF2701	0.51	+0.5
2,721,831	-		GFF2701	0.51	+0.4
2,721,849	+		GFF2701	0.53	-0.4
2,721,849	+		GFF2701	0.53	+0.2
2,721,850	-		GFF2701	0.53	-0.9
2,721,860	+		GFF2701	0.54	+0.5
2,721,860	+		GFF2701	0.54	+0.9
2,721,860	+		GFF2701	0.54	-0.2
2,721,860	+		GFF2701	0.54	-0.3
2,721,861	+		GFF2701	0.54	+0.2
2,721,868	-		GFF2701	0.55	+0.3
2,721,868	-		GFF2701	0.55	+1.3
2,721,868	-		GFF2701	0.55	+0.6
2,721,875	+		GFF2701	0.56	+1.3
2,721,903	+		GFF2701	0.59	-0.3
2,721,904	-		GFF2701	0.59	+0.4
2,721,904	-		GFF2701	0.59	+0.6
2,721,908	+		GFF2701	0.59	-0.0
2,721,913	+		GFF2701	0.60	+0.2
2,721,921	-		GFF2701	0.61	-0.7
2,721,935	-		GFF2701	0.62	-0.7
2,721,940	-		GFF2701	0.63	+1.6
2,721,940	-		GFF2701	0.63	+1.4
2,721,950	+		GFF2701	0.64	+0.2
2,721,950	+		GFF2701	0.64	+0.7
2,721,950	+		GFF2701	0.64	-0.2
2,721,953	-		GFF2701	0.64	-0.8
2,721,958	-		GFF2701	0.65	-0.1
2,721,958	-		GFF2701	0.65	-0.8
2,721,958	-		GFF2701	0.65	-1.3
2,721,968	-		GFF2701	0.66	-0.2
2,721,975	+		GFF2701	0.66	+1.3
2,721,977	+		GFF2701	0.67	+1.4
2,721,983	-		GFF2701	0.67	-0.6
2,721,984	-		GFF2701	0.67	-1.1
2,721,985	-		GFF2701	0.67	-1.4
2,721,989	-		GFF2701	0.68	-0.3
2,721,994	-		GFF2701	0.68	-1.0
2,722,008	+		GFF2701	0.70	+0.6
2,722,029	+		GFF2701	0.72	-0.1
2,722,029	+		GFF2701	0.72	+0.2
2,722,029	+		GFF2701	0.72	-0.6
2,722,029	+		GFF2701	0.72	-0.8
2,722,029	+		GFF2701	0.72	+0.1
2,722,036	-		GFF2701	0.73	+0.2
2,722,036	-		GFF2701	0.73	-1.0
2,722,036	-		GFF2701	0.73	+0.3
2,722,037	-		GFF2701	0.73	-2.2
2,722,037	-		GFF2701	0.73	+0.8
2,722,037	-		GFF2701	0.73	+0.3
2,722,055	+		GFF2701	0.75	+1.0
2,722,069	+		GFF2701	0.76	-0.1
2,722,130	+		GFF2701	0.83	+2.1
2,722,137	+		GFF2701	0.83	+0.6
2,722,138	-		GFF2701	0.83	+0.3
2,722,142	+		GFF2701	0.84	-0.2
2,722,150	-		GFF2701	0.85	-0.0
2,722,153	+		GFF2701	0.85	-0.2
2,722,161	-		GFF2701	0.86	+0.6
2,722,164	+		GFF2701	0.86	-1.0
2,722,164	+		GFF2701	0.86	+0.6
2,722,167	+		GFF2701	0.87	-1.1
2,722,169	+		GFF2701	0.87	+0.8
2,722,169	+		GFF2701	0.87	+0.1
2,722,172	-		GFF2701	0.87	+0.5
2,722,177	+		GFF2701	0.88	-1.2
2,722,177	-		GFF2701	0.88	+1.1
2,722,177	-		GFF2701	0.88	+0.8
2,722,177	-		GFF2701	0.88	-0.4
2,722,202	-				-0.4
2,722,204	+				+1.1
2,722,209	+				+0.4
2,722,217	-				-0.4
2,722,245	+				-0.5
2,722,253	-				-1.9
2,722,256	+				+1.0
2,722,256	+				+0.4
2,722,256	+				-0.1
2,722,264	-				-0.1
2,722,264	-				+0.3
2,722,264	-				-0.4
2,722,264	-				-2.8
2,722,288	+				+0.3
2,722,336	+				-0.2
2,722,378	+				+1.2
2,722,386	-				+0.4
2,722,386	-				-0.5
2,722,387	-				+2.3
2,722,391	+				-0.5
2,722,399	-				-0.0
2,722,399	-				-0.0
2,722,399	-				+0.7
2,722,427	+				+0.4
2,722,427	+				-0.3
2,722,427	+				+0.5
2,722,436	+				-2.4
2,722,436	+				-0.0
2,722,436	+				-2.2
2,722,444	-				-1.0
2,722,444	-				-0.9
2,722,444	-				+0.7
2,722,444	-				-1.9
2,722,452	+				-0.1
2,722,462	-				+0.9
2,722,470	+				-3.4
2,722,543	+				+0.8
2,722,543	+				+0.2
2,722,543	+				+0.1
2,722,551	-				-2.6
2,722,551	-				+0.7
2,722,551	-				+0.5
2,722,551	-				-1.0
2,722,551	-				+0.6
2,722,551	-				+0.5
2,722,551	-				-0.4
2,722,551	-				+0.2
2,722,553	+				-0.2
2,722,590	+				-0.2
2,722,609	+				-1.0
2,722,617	-				-2.0
2,722,653	-				-0.0
2,722,667	+				+0.4
2,722,706	+				-0.5
2,722,708	+				+0.9
2,722,714	-		GFF2702	0.10	+0.1
2,722,714	-		GFF2702	0.10	+1.9
2,722,714	-		GFF2702	0.10	-1.0
2,722,714	-		GFF2702	0.10	-1.3
2,722,716	-		GFF2702	0.10	-0.1
2,722,754	-		GFF2702	0.13	+0.9
2,722,770	+		GFF2702	0.14	-1.2
2,722,778	-		GFF2702	0.15	+0.2
2,722,793	+		GFF2702	0.16	-0.7
2,722,793	+		GFF2702	0.16	+0.3
2,722,793	+		GFF2702	0.16	-0.8
2,722,795	-		GFF2702	0.16	-2.1
2,722,801	-		GFF2702	0.16	+0.2
2,722,827	+		GFF2702	0.18	+0.2
2,722,827	+		GFF2702	0.18	+0.1
2,722,827	+		GFF2702	0.18	+0.6
2,722,827	+		GFF2702	0.18	-0.1
2,722,827	+		GFF2702	0.18	-2.1
2,722,827	+		GFF2702	0.18	-1.1
2,722,827	+		GFF2702	0.18	+1.0
2,722,835	-		GFF2702	0.19	+0.2
2,722,835	-		GFF2702	0.19	-0.6
2,722,835	-		GFF2702	0.19	+1.2
2,722,835	-		GFF2702	0.19	+0.4
2,722,835	-		GFF2702	0.19	-0.0
2,722,835	-		GFF2702	0.19	+0.1
2,722,835	-		GFF2702	0.19	+0.4
2,722,841	+		GFF2702	0.19	-0.2
2,722,841	+		GFF2702	0.19	+0.1
2,722,846	+		GFF2702	0.19	+1.9
2,722,846	+		GFF2702	0.19	-0.7
2,722,849	-		GFF2702	0.20	-1.1
2,722,849	-		GFF2702	0.20	+0.0
2,722,851	+		GFF2702	0.20	+0.5
2,722,854	-		GFF2702	0.20	-1.0
2,722,854	-		GFF2702	0.20	-1.3
2,722,854	-		GFF2702	0.20	+0.4
2,722,854	-		GFF2702	0.20	-0.3
2,722,854	-		GFF2702	0.20	-0.1
2,722,856	+		GFF2702	0.20	-0.3
2,722,864	-		GFF2702	0.21	-0.4
2,722,866	+		GFF2702	0.21	-1.3
2,722,869	+		GFF2702	0.21	-0.9
2,722,872	-		GFF2702	0.21	+0.5
2,722,872	-		GFF2702	0.21	-0.0
2,722,924	-		GFF2702	0.25	-0.4
2,722,924	-		GFF2702	0.25	+0.3
2,722,951	-		GFF2702	0.27	+0.6
2,722,951	-		GFF2702	0.27	+0.8
2,722,954	+		GFF2702	0.27	+2.0
2,722,962	-		GFF2702	0.27	-0.7
2,722,967	-		GFF2702	0.28	-0.5
2,722,989	+		GFF2702	0.29	-0.3
2,722,994	+		GFF2702	0.30	-0.7
2,722,997	-		GFF2702	0.30	-0.7
2,723,002	-		GFF2702	0.30	+0.9
2,723,016	+		GFF2702	0.31	-1.4
2,723,016	+		GFF2702	0.31	+0.6
2,723,021	+		GFF2702	0.32	-0.4
2,723,021	+		GFF2702	0.32	-0.3
2,723,029	-		GFF2702	0.32	+1.2
2,723,029	-		GFF2702	0.32	+0.2
2,723,049	+		GFF2702	0.33	-0.0
2,723,092	+		GFF2702	0.36	-2.0
2,723,114	+		GFF2702	0.38	-0.9
2,723,114	+		GFF2702	0.38	-1.0
2,723,114	+		GFF2702	0.38	+0.1
2,723,114	+		GFF2702	0.38	-2.5
2,723,147	-		GFF2702	0.40	-0.7
2,723,157	+		GFF2702	0.41	-0.7
2,723,157	+		GFF2702	0.41	+0.1
2,723,165	-		GFF2702	0.42	-1.0
2,723,165	-		GFF2702	0.42	-1.9
2,723,179	-		GFF2702	0.42	+0.1
2,723,212	+		GFF2702	0.45	-0.8
2,723,259	+		GFF2702	0.48	+1.2
2,723,259	-		GFF2702	0.48	-2.0
2,723,281	-		GFF2702	0.50	-0.9
2,723,281	-		GFF2702	0.50	+0.9
2,723,304	-		GFF2702	0.51	+0.2
2,723,312	-		GFF2702	0.52	-0.4
2,723,330	+		GFF2702	0.53	+0.2
2,723,359	-		GFF2702	0.55	-0.9
2,723,381	+		GFF2702	0.57	+0.6
2,723,381	+		GFF2702	0.57	-0.5
2,723,381	+		GFF2702	0.57	-1.1
2,723,381	+		GFF2702	0.57	+0.1
2,723,381	+		GFF2702	0.57	-0.3
2,723,381	+		GFF2702	0.57	+0.3
2,723,381	+		GFF2702	0.57	-0.5
2,723,381	+		GFF2702	0.57	-0.0
2,723,382	+		GFF2702	0.57	-0.3
2,723,382	+		GFF2702	0.57	+0.2
2,723,389	-		GFF2702	0.57	-0.6
2,723,389	-		GFF2702	0.57	+0.5
2,723,389	-		GFF2702	0.57	+1.1
2,723,389	-		GFF2702	0.57	+1.4
2,723,389	-		GFF2702	0.57	+0.9
2,723,389	-		GFF2702	0.57	-1.6
2,723,389	-		GFF2702	0.57	-0.3
2,723,389	-		GFF2702	0.57	+0.7
2,723,389	-		GFF2702	0.57	+0.1
2,723,389	-		GFF2702	0.57	-0.7
2,723,389	-		GFF2702	0.57	+0.1
2,723,389	-		GFF2702	0.57	-2.1
2,723,389	-		GFF2702	0.57	-0.9
2,723,389	-		GFF2702	0.57	-0.2
2,723,389	-		GFF2702	0.57	+0.3
2,723,389	-		GFF2702	0.57	+0.3
2,723,389	-		GFF2702	0.57	-0.6
2,723,389	-		GFF2702	0.57	+0.0
2,723,389	-		GFF2702	0.57	-1.0
2,723,389	-		GFF2702	0.57	+0.3
2,723,395	+		GFF2702	0.57	-0.1
2,723,406	+		GFF2702	0.58	-0.3
2,723,414	-		GFF2702	0.59	-1.6
2,723,439	+		GFF2702	0.61	-0.7
2,723,439	+		GFF2702	0.61	-0.0
2,723,439	-		GFF2702	0.61	-0.1
2,723,442	-		GFF2702	0.61	-1.2
2,723,442	-		GFF2702	0.61	-0.9
2,723,453	+		GFF2702	0.62	-0.4
2,723,453	+		GFF2702	0.62	-1.9
2,723,453	+		GFF2702	0.62	-0.8
2,723,453	+		GFF2702	0.62	+0.3
2,723,453	+		GFF2702	0.62	+0.8
2,723,456	-		GFF2702	0.62	-1.3
2,723,461	-		GFF2702	0.62	+0.5
2,723,461	-		GFF2702	0.62	-0.1
2,723,461	-		GFF2702	0.62	-0.4
2,723,465	+		GFF2702	0.62	-1.4
2,723,471	-		GFF2702	0.63	+0.4
2,723,471	-		GFF2702	0.63	-2.5
2,723,477	-		GFF2702	0.63	+0.4
2,723,503	+		GFF2702	0.65	+0.2
2,723,511	-		GFF2702	0.66	-2.6
2,723,541	-		GFF2702	0.68	-0.4
2,723,555	+		GFF2702	0.69	+1.0
2,723,557	-		GFF2702	0.69	-0.4
2,723,565	+		GFF2702	0.69	-0.2
2,723,565	+		GFF2702	0.69	-2.7
2,723,565	+		GFF2702	0.69	-0.8
2,723,565	+		GFF2702	0.69	-0.9
2,723,565	+		GFF2702	0.69	+0.6
2,723,565	+		GFF2702	0.69	-0.5
2,723,573	-		GFF2702	0.70	-0.1
2,723,573	-		GFF2702	0.70	-0.5
2,723,593	+		GFF2702	0.71	+0.4
2,723,593	+		GFF2702	0.71	+0.6
2,723,593	+		GFF2702	0.71	-2.8
2,723,593	-		GFF2702	0.71	-0.8
2,723,601	-		GFF2702	0.72	+0.0
2,723,601	-		GFF2702	0.72	+0.2
2,723,601	-		GFF2702	0.72	+0.7
2,723,611	-		GFF2702	0.72	+0.6
2,723,617	+		GFF2702	0.73	+1.3
2,723,638	-		GFF2702	0.74	-1.1
2,723,639	+		GFF2702	0.74	+0.7
2,723,661	-		GFF2702	0.76	-1.3
2,723,661	-		GFF2702	0.76	-0.2
2,723,668	+		GFF2702	0.76	+0.3
2,723,676	-		GFF2702	0.77	+0.4
2,723,699	+		GFF2702	0.79	+0.5
2,723,744	+		GFF2702	0.82	+0.2
2,723,752	-		GFF2702	0.82	-0.0
2,723,783	+		GFF2702	0.84	-0.7
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