Strain Fitness in Sphingobium sp. HT1-2 around GFF2598

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,613,030	-		GFF2596	0.44	+0.2
2,613,043	-		GFF2596	0.45	-0.1
2,613,056	+		GFF2596	0.46	-0.4
2,613,058	-		GFF2596	0.46	-1.9
2,613,059	-		GFF2596	0.47	-1.8
2,613,083	-		GFF2596	0.49	-1.5
2,613,133	+		GFF2596	0.53	-1.5
2,613,141	+		GFF2596	0.54	-1.6
2,613,141	+		GFF2596	0.54	+0.1
2,613,149	-		GFF2596	0.55	+0.5
2,613,181	-		GFF2596	0.58	-2.3
2,613,192	+		GFF2596	0.59	-0.6
2,613,209	+		GFF2596	0.60	+0.3
2,613,218	+		GFF2596	0.61	+0.2
2,613,244	-		GFF2596	0.63	-1.4
2,613,255	+		GFF2596	0.64	-1.8
2,613,255	+		GFF2596	0.64	-1.2
2,613,257	+		GFF2596	0.65	-0.8
2,613,263	-		GFF2596	0.65	-0.5
2,613,263	-		GFF2596	0.65	-0.8
2,613,265	+		GFF2596	0.65	-0.1
2,613,265	+		GFF2596	0.65	+0.0
2,613,292	-		GFF2596	0.68	-1.6
2,613,326	-		GFF2596	0.71	+1.5
2,613,345	+		GFF2596	0.73	-2.5
2,613,366	+		GFF2596	0.75	-2.4
2,613,389	-		GFF2596	0.77	-0.4
2,613,398	+		GFF2596	0.78	-0.1
2,613,408	+		GFF2596	0.78	-2.0
2,613,416	-		GFF2596	0.79	-1.3
2,613,416	-		GFF2596	0.79	-1.3
2,613,416	-		GFF2596	0.79	-0.5
2,613,416	-		GFF2596	0.79	-1.0
2,613,435	+		GFF2596	0.81	-0.9
2,613,438	-		GFF2596	0.81	-1.4
2,613,465	+		GFF2596	0.84	-0.1
2,613,465	+		GFF2596	0.84	-2.3
2,613,465	+		GFF2596	0.84	+0.1
2,613,473	-		GFF2596	0.84	+1.3
2,613,491	-		GFF2596	0.86	-0.5
2,613,494	+		GFF2596	0.86	-1.8
2,613,502	-		GFF2596	0.87	-1.7
2,613,512	+		GFF2596	0.88	-1.1
2,613,518	+		GFF2596	0.89	-0.7
2,613,518	+		GFF2596	0.89	-2.3
2,613,520	-		GFF2596	0.89	-1.5
2,613,520	-		GFF2596	0.89	+0.5
2,613,525	-		GFF2596	0.89	-1.2
2,613,526	-		GFF2596	0.89	-0.1
2,613,526	-		GFF2596	0.89	-0.6
2,613,526	-		GFF2596	0.89	+0.9
2,613,526	-		GFF2596	0.89	-1.7
2,613,528	+		GFF2596	0.89	-0.6
2,613,528	+		GFF2596	0.89	-0.7
2,613,528	+		GFF2596	0.89	+0.2
2,613,543	-				-0.0
2,613,546	+				-1.5
2,613,546	+				-0.6
2,613,547	+				+0.7
2,613,558	-				-0.7
2,613,560	+				-0.7
2,613,560	+				-0.3
2,613,560	+				+0.2
2,613,560	+				-0.6
2,613,568	-				-0.8
2,613,568	-				+1.0
2,613,571	-				+0.9
2,613,573	-				-0.7
2,613,582	+				-2.8
2,613,582	+				-1.4
2,613,634	+				-0.7
2,613,649	+				-0.8
2,613,652	+				-1.1
2,613,665	+				-0.8
2,613,665	+				+0.4
2,613,673	-				-0.1
2,613,681	+				-0.2
2,613,683	+				-0.3
2,613,689	-		GFF2597	0.10	+0.7
2,613,741	+		GFF2597	0.24	-1.3
2,613,752	+		GFF2597	0.27	-0.5
2,613,760	-		GFF2597	0.29	-2.4
2,613,774	+		GFF2597	0.32	-0.3
2,613,774	-		GFF2597	0.32	+0.2
2,613,774	-		GFF2597	0.32	-2.3
2,613,782	-		GFF2597	0.34	-0.4
2,613,782	-		GFF2597	0.34	-0.3
2,613,794	-		GFF2597	0.38	-1.5
2,613,796	+		GFF2597	0.38	-2.7
2,613,800	+		GFF2597	0.39	-0.1
2,613,804	-		GFF2597	0.40	+0.6
2,613,804	-		GFF2597	0.40	-1.2
2,613,814	-		GFF2597	0.43	-1.9
2,613,825	+		GFF2597	0.46	+0.8
2,613,833	+		GFF2597	0.48	-1.8
2,613,833	+		GFF2597	0.48	-0.1
2,613,841	-		GFF2597	0.50	+0.1
2,613,847	+		GFF2597	0.51	-1.3
2,613,852	+		GFF2597	0.53	-0.8
2,613,852	+		GFF2597	0.53	+0.8
2,613,852	+		GFF2597	0.53	-0.4
2,613,852	+		GFF2597	0.53	+0.5
2,613,852	+		GFF2597	0.53	-0.2
2,613,852	+		GFF2597	0.53	-3.2
2,613,857	+		GFF2597	0.54	-1.5
2,613,857	+		GFF2597	0.54	-1.0
2,613,857	+		GFF2597	0.54	-0.3
2,613,857	+		GFF2597	0.54	-0.3
2,613,857	+		GFF2597	0.54	-0.6
2,613,857	+		GFF2597	0.54	-0.9
2,613,857	+		GFF2597	0.54	-1.5
2,613,857	+		GFF2597	0.54	-2.9
2,613,857	+		GFF2597	0.54	-1.1
2,613,857	+		GFF2597	0.54	-0.7
2,613,857	+		GFF2597	0.54	+0.4
2,613,857	+		GFF2597	0.54	-0.2
2,613,857	+		GFF2597	0.54	-0.5
2,613,857	+		GFF2597	0.54	-1.1
2,613,857	+		GFF2597	0.54	-1.0
2,613,857	+		GFF2597	0.54	-0.3
2,613,857	+		GFF2597	0.54	+0.7
2,613,857	+		GFF2597	0.54	-1.9
2,613,857	+		GFF2597	0.54	+1.5
2,613,857	+		GFF2597	0.54	-1.7
2,613,857	+		GFF2597	0.54	-1.2
2,613,857	+		GFF2597	0.54	-1.1
2,613,857	+		GFF2597	0.54	-0.8
2,613,857	+		GFF2597	0.54	-1.9
2,613,857	+		GFF2597	0.54	-2.4
2,613,859	+		GFF2597	0.55	-1.7
2,613,859	+		GFF2597	0.55	-1.3
2,613,859	+		GFF2597	0.55	-0.3
2,613,860	-		GFF2597	0.55	-1.6
2,613,860	-		GFF2597	0.55	+0.1
2,613,860	-		GFF2597	0.55	+0.2
2,613,860	-		GFF2597	0.55	+0.3
2,613,862	-		GFF2597	0.55	-2.3
2,613,865	-		GFF2597	0.56	-1.5
2,613,865	-		GFF2597	0.56	-2.0
2,613,865	-		GFF2597	0.56	-0.5
2,613,865	-		GFF2597	0.56	-1.4
2,613,865	-		GFF2597	0.56	-1.1
2,613,865	-		GFF2597	0.56	-0.4
2,613,865	-		GFF2597	0.56	-2.1
2,613,865	-		GFF2597	0.56	-2.8
2,613,865	-		GFF2597	0.56	+0.1
2,613,865	-		GFF2597	0.56	-1.8
2,613,865	-		GFF2597	0.56	-0.6
2,613,865	-		GFF2597	0.56	-0.5
2,613,865	-		GFF2597	0.56	+0.2
2,613,865	-		GFF2597	0.56	+0.4
2,613,865	-		GFF2597	0.56	-2.1
2,613,867	-		GFF2597	0.57	-1.6
2,613,867	-		GFF2597	0.57	-1.0
2,613,867	-		GFF2597	0.57	-1.9
2,613,867	-		GFF2597	0.57	-1.0
2,613,875	-		GFF2597	0.59	-1.0
2,613,889	+		GFF2597	0.62	-0.5
2,613,899	-		GFF2597	0.65	-0.7
2,613,899	-		GFF2597	0.65	-0.6
2,613,936	+		GFF2597	0.75	-0.3
2,613,937	-		GFF2597	0.75	-1.0
2,613,942	-		GFF2597	0.76	+0.9
2,613,942	-		GFF2597	0.76	-1.7
2,613,942	-		GFF2597	0.76	-0.7
2,613,944	+		GFF2597	0.77	-2.8
2,613,976	-		GFF2597	0.85	+0.3
2,614,026	+				-0.9
2,614,034	-				-0.9
2,614,034	-				-1.3
2,614,073	+				-2.8
2,614,081	-				-0.8
2,614,087	+				-0.6
2,614,105	+				-1.4
2,614,109	+				-1.3
2,614,119	-				-0.6
2,614,145	-				-2.1
2,614,145	-				+0.4
2,614,151	+				-1.5
2,614,181	+		GFF2598	0.11	-0.3
2,614,210	-		GFF2598	0.13	-1.2
2,614,211	-		GFF2598	0.13	-2.2
2,614,216	-		GFF2598	0.13	-0.3
2,614,216	-		GFF2598	0.13	-2.5
2,614,224	-		GFF2598	0.14	-0.8
2,614,226	+		GFF2598	0.14	+0.2
2,614,229	-		GFF2598	0.14	-0.1
2,614,257	+		GFF2598	0.16	-2.5
2,614,279	+		GFF2598	0.17	-1.8
2,614,279	+		GFF2598	0.17	-1.8
2,614,279	+		GFF2598	0.17	-2.1
2,614,287	-		GFF2598	0.18	-0.7
2,614,287	-		GFF2598	0.18	-2.1
2,614,287	-		GFF2598	0.18	+0.8
2,614,288	+		GFF2598	0.18	-1.9
2,614,296	-		GFF2598	0.18	-0.5
2,614,297	-		GFF2598	0.19	+0.1
2,614,303	+		GFF2598	0.19	-0.8
2,614,310	+		GFF2598	0.19	-0.1
2,614,310	+		GFF2598	0.19	+0.5
2,614,311	-		GFF2598	0.20	-0.1
2,614,311	-		GFF2598	0.20	-2.6
2,614,331	-		GFF2598	0.21	-3.3
2,614,347	+		GFF2598	0.22	+0.4
2,614,351	+		GFF2598	0.22	-2.3
2,614,353	-		GFF2598	0.22	-1.3
2,614,369	+		GFF2598	0.24	-3.1
2,614,374	+		GFF2598	0.24	-0.0
2,614,382	-		GFF2598	0.24	-1.3
2,614,382	-		GFF2598	0.24	-2.0
2,614,382	-		GFF2598	0.24	-0.2
2,614,387	-		GFF2598	0.25	-0.6
2,614,396	+		GFF2598	0.25	-0.5
2,614,422	+		GFF2598	0.27	-0.0
2,614,463	+		GFF2598	0.30	+0.4
2,614,473	+		GFF2598	0.31	-0.0
2,614,481	-		GFF2598	0.31	-2.4
2,614,481	-		GFF2598	0.31	-0.4
2,614,491	-		GFF2598	0.32	-0.9
2,614,491	-		GFF2598	0.32	-0.3
2,614,497	-		GFF2598	0.32	-1.5
2,614,512	+		GFF2598	0.33	-1.7
2,614,520	-		GFF2598	0.34	-2.1
2,614,520	-		GFF2598	0.34	-0.9
2,614,520	-		GFF2598	0.34	-2.3
2,614,520	-		GFF2598	0.34	-0.3
2,614,520	-		GFF2598	0.34	-0.3
2,614,522	+		GFF2598	0.34	-1.5
2,614,531	-		GFF2598	0.35	+1.0
2,614,543	-		GFF2598	0.36	-1.4
2,614,543	-		GFF2598	0.36	-1.9
2,614,557	+		GFF2598	0.37	-2.3
2,614,565	-		GFF2598	0.37	+0.7
2,614,568	+		GFF2598	0.37	-1.9
2,614,573	+		GFF2598	0.38	-0.9
2,614,576	-		GFF2598	0.38	-1.5
2,614,578	+		GFF2598	0.38	-1.1
2,614,588	-		GFF2598	0.39	+0.3
2,614,623	-		GFF2598	0.41	-0.1
2,614,637	+		GFF2598	0.42	-1.0
2,614,638	-		GFF2598	0.42	-1.2
2,614,657	+		GFF2598	0.43	-1.4
2,614,659	+		GFF2598	0.44	-1.8
2,614,659	+		GFF2598	0.44	-0.6
2,614,660	-		GFF2598	0.44	-0.9
2,614,664	+		GFF2598	0.44	-0.9
2,614,667	-		GFF2598	0.44	-0.1
2,614,667	-		GFF2598	0.44	-0.7
2,614,669	+		GFF2598	0.44	-1.4
2,614,671	-		GFF2598	0.44	+0.0
2,614,677	-		GFF2598	0.45	-0.6
2,614,677	-		GFF2598	0.45	-0.8
2,614,677	-		GFF2598	0.45	-3.2
2,614,683	+		GFF2598	0.45	-0.5
2,614,738	+		GFF2598	0.49	+0.2
2,614,738	+		GFF2598	0.49	+0.8
2,614,738	+		GFF2598	0.49	-2.1
2,614,738	+		GFF2598	0.49	-3.7
2,614,743	+		GFF2598	0.49	-1.7
2,614,746	-		GFF2598	0.50	-1.2
2,614,746	-		GFF2598	0.50	+0.2
2,614,746	-		GFF2598	0.50	+0.1
2,614,751	-		GFF2598	0.50	-0.2
2,614,781	-		GFF2598	0.52	-1.7
2,614,810	+		GFF2598	0.54	-1.7
2,614,818	-		GFF2598	0.55	-1.4
2,614,818	-		GFF2598	0.55	-2.4
2,614,842	+		GFF2598	0.56	-1.4
2,614,850	-		GFF2598	0.57	+0.0
2,614,873	-		GFF2598	0.58	-1.4
2,614,882	+		GFF2598	0.59	-0.3
2,614,882	+		GFF2598	0.59	-0.8
2,614,882	+		GFF2598	0.59	-0.6
2,614,882	+		GFF2598	0.59	-0.9
2,614,882	+		GFF2598	0.59	-0.2
2,614,882	+		GFF2598	0.59	+0.4
2,614,882	+		GFF2598	0.59	-3.5
2,614,882	+		GFF2598	0.59	+0.9
2,614,882	+		GFF2598	0.59	+1.0
2,614,882	+		GFF2598	0.59	-1.3
2,614,882	+		GFF2598	0.59	-1.4
2,614,882	+		GFF2598	0.59	+0.4
2,614,882	+		GFF2598	0.59	-1.8
2,614,882	+		GFF2598	0.59	-0.4
2,614,882	+		GFF2598	0.59	-1.6
2,614,882	+		GFF2598	0.59	-2.6
2,614,882	+		GFF2598	0.59	-1.9
2,614,882	+		GFF2598	0.59	-1.7
2,614,889	+		GFF2598	0.59	-1.9
2,614,890	-		GFF2598	0.59	-2.5
2,614,890	-		GFF2598	0.59	-0.4
2,614,890	-		GFF2598	0.59	-0.3
2,614,890	-		GFF2598	0.59	-0.5
2,614,890	-		GFF2598	0.59	+0.8
2,614,890	-		GFF2598	0.59	-1.4
2,614,890	-		GFF2598	0.59	-1.0
2,614,890	-		GFF2598	0.59	+0.2
2,614,890	-		GFF2598	0.59	-0.5
2,614,890	-		GFF2598	0.59	-0.0
2,614,890	-		GFF2598	0.59	-1.5
2,614,890	-		GFF2598	0.59	-2.1
2,614,890	-		GFF2598	0.59	+0.1
2,614,890	-		GFF2598	0.59	-0.9
2,614,890	-		GFF2598	0.59	-0.9
2,614,890	-		GFF2598	0.59	-1.8
2,614,890	-		GFF2598	0.59	-1.3
2,614,890	-		GFF2598	0.59	+0.2
2,614,890	-		GFF2598	0.59	-0.1
2,614,890	-		GFF2598	0.59	-1.5
2,614,890	-		GFF2598	0.59	-1.7
2,614,890	-		GFF2598	0.59	-1.5
2,614,928	-		GFF2598	0.62	-0.6
2,614,975	-		GFF2598	0.65	-1.7
2,614,987	-		GFF2598	0.66	-0.2
2,614,988	+		GFF2598	0.66	-1.1
2,614,988	+		GFF2598	0.66	-1.7
2,615,035	+		GFF2598	0.69	-1.6
2,615,085	+		GFF2598	0.73	-2.1
2,615,121	+		GFF2598	0.75	-2.7
2,615,130	+		GFF2598	0.76	-2.8
2,615,130	+		GFF2598	0.76	-0.1
2,615,130	+		GFF2598	0.76	+1.0
2,615,138	-		GFF2598	0.77	-1.7
2,615,140	+		GFF2598	0.77	+1.3
2,615,148	-		GFF2598	0.77	-0.4
2,615,155	+		GFF2598	0.78	-0.3
2,615,159	-		GFF2598	0.78	+0.0
2,615,196	+		GFF2598	0.81	-0.5
2,615,204	+		GFF2598	0.81	-0.2
2,615,204	+		GFF2598	0.81	-2.5
2,615,204	-		GFF2598	0.81	-0.8
2,615,212	-		GFF2598	0.82	-0.5
2,615,228	+		GFF2598	0.83	-1.3
2,615,236	-		GFF2598	0.83	-0.9
2,615,236	-		GFF2598	0.83	-1.6
2,615,260	+		GFF2598	0.85	-0.7
2,615,298	+		GFF2598	0.88	-0.5
2,615,303	+		GFF2598	0.88	-0.8
2,615,306	-		GFF2598	0.88	-1.5
2,615,308	+		GFF2598	0.88	+0.1
2,615,313	+		GFF2598	0.89	-0.4
2,615,318	+		GFF2598	0.89	-1.0
2,615,318	+		GFF2598	0.89	-1.6
2,615,318	+		GFF2598	0.89	-1.4
2,615,318	+		GFF2598	0.89	-0.8
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2,615,340	-				-1.9
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2,615,342	+				-1.7
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2,615,342	+				-0.7
2,615,342	+				-0.4
2,615,342	+				-0.5
2,615,350	-				-2.1
2,615,350	-				-0.4
2,615,350	-				+0.5
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2,615,350	-				-0.1
2,615,350	-				-0.6
2,615,350	-				-0.8
2,615,350	-				-1.3
2,615,350	-				+0.1
2,615,350	-				+0.6
2,615,352	+				-1.1
2,615,352	+				+1.4
2,615,359	-				-0.7
2,615,360	-				-3.3
2,615,360	-				-0.7
2,615,360	-				-1.9
2,615,360	-				-0.4
2,615,360	-				-0.6
2,615,393	+				-1.0
2,615,396	-				-0.4
2,615,459	+				-2.5
2,615,464	+				-0.6
2,615,470	-				-0.5
2,615,472	-				+0.3
2,615,479	-				+0.9
2,615,482	-				-1.5
2,615,492	-				-1.4
2,615,519	+				-1.7
2,615,527	-				-1.4
2,615,527	-				-2.1
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2,615,528	+				-2.3
2,615,528	+				-0.3
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2,615,536	-				+0.4
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2,615,543	+				-1.9
2,615,551	-				+0.0
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2,615,556	-				-1.6
2,615,591	+				-0.9
2,615,591	+				+0.9
2,615,591	+				+0.2
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2,615,598	-				+0.0
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2,615,599	-				-1.7
2,615,599	-				-0.9
2,615,599	-				-1.2
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2,615,633	+				-0.8
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2,615,641	-				-1.4
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2,615,657	-		GFF2599	0.11	-1.8
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2,615,711	-		GFF2599	0.14	-1.7
2,615,747	-		GFF2599	0.16	+0.1
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2,615,926	+		GFF2599	0.26	-0.7
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2,616,005	-		GFF2599	0.31	-0.5
2,616,010	-		GFF2599	0.31	-0.7
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2,616,037	+		GFF2599	0.32	-1.5
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2,616,294	-		GFF2599	0.47	-0.7
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2,616,447	+		GFF2599	0.56	-2.9
2,616,447	+		GFF2599	0.56	-0.0
2,616,475	+		GFF2599	0.58	+1.0