Strain Fitness in Sphingobium sp. HT1-2 around GFF4982

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,980,186	-				+0.7
4,980,195	-				+1.2
4,980,205	+				+0.2
4,980,214	+				+0.1
4,980,215	+				+0.1
4,980,215	+				+0.8
4,980,222	-				+1.2
4,980,223	-				+0.5
4,980,223	-				+0.1
4,980,277	+				-0.5
4,980,277	+				-1.7
4,980,277	+				+0.3
4,980,294	+				+0.5
4,980,318	+				+0.2
4,980,326	-				-1.8
4,980,326	-				-1.6
4,980,339	+				+0.2
4,980,339	+				-0.1
4,980,347	-				+0.6
4,980,347	-				+0.2
4,980,347	-				-1.1
4,980,347	-				+0.4
4,980,347	-				+0.0
4,980,347	-				+0.2
4,980,352	-				-0.5
4,980,398	-				-0.2
4,980,404	+				-0.1
4,980,450	-				+0.9
4,980,457	+				+0.0
4,980,457	+				+1.9
4,980,465	-				-1.6
4,980,465	-				+1.0
4,980,465	-				-1.9
4,980,657	+		GFF4981	0.44	+0.7
4,980,657	+		GFF4981	0.44	+0.7
4,980,659	-		GFF4981	0.45	-0.5
4,980,830	+				-1.5
4,980,846	-				+0.4
4,980,911	+				-0.2
4,980,911	+				-2.0
4,980,919	+				-1.6
4,980,919	-				-0.1
4,980,923	+				+1.0
4,980,929	-				-0.3
4,980,929	-				-0.4
4,980,965	-				+0.1
4,981,035	+				+0.9
4,981,038	-				+0.0
4,981,058	-				+0.1
4,981,063	+				+1.5
4,981,063	+				+0.8
4,981,063	+				+1.3
4,981,071	+				+0.6
4,981,071	-				-1.3
4,981,073	-				-0.6
4,981,076	+				-1.9
4,981,093	+				-0.2
4,981,093	+				+0.5
4,981,095	+				-0.3
4,981,103	-				-0.3
4,981,107	-				-0.1
4,981,125	-				+0.1
4,981,127	+				-0.6
4,981,130	-				+0.2
4,981,132	+				+1.6
4,981,135	-				+0.1
4,981,135	-				-0.6
4,981,148	+				-1.8
4,981,168	+				+0.1
4,981,168	+				-0.7
4,981,168	+				-0.8
4,981,192	+				+1.0
4,981,192	-				-0.3
4,981,200	-				+1.1
4,981,223	+				+1.0
4,981,236	+				-2.3
4,981,239	-				-0.0
4,981,241	+				+0.0
4,981,244	-				+0.2
4,981,244	-				+0.8
4,981,244	-				-0.5
4,981,244	-				-0.8
4,981,244	-				+1.7
4,981,244	-				+0.3
4,981,254	+				+1.1
4,981,254	+				+0.0
4,981,254	+				-1.1
4,981,255	+				+0.2
4,981,263	-				+0.5
4,981,263	-				+0.9
4,981,263	-				+0.8
4,981,263	-				-0.9
4,981,271	+				+0.1
4,981,272	+				-0.3
4,981,302	+		GFF4982	0.10	-1.9
4,981,324	+		GFF4982	0.12	+0.7
4,981,332	-		GFF4982	0.13	+1.6
4,981,334	-		GFF4982	0.13	-1.8
4,981,341	-		GFF4982	0.13	+0.1
4,981,343	+		GFF4982	0.14	+0.9
4,981,343	+		GFF4982	0.14	-0.6
4,981,351	-		GFF4982	0.14	-0.9
4,981,355	+		GFF4982	0.15	+0.6
4,981,383	-		GFF4982	0.17	+2.0
4,981,388	-		GFF4982	0.17	+0.3
4,981,390	-		GFF4982	0.17	+0.0
4,981,435	-		GFF4982	0.21	-1.2
4,981,435	-		GFF4982	0.21	-1.1
4,981,436	+		GFF4982	0.21	+0.4
4,981,441	+		GFF4982	0.21	-1.4
4,981,449	+		GFF4982	0.22	-2.2
4,981,449	+		GFF4982	0.22	+1.1
4,981,449	+		GFF4982	0.22	-0.7
4,981,457	-		GFF4982	0.23	-1.0
4,981,457	-		GFF4982	0.23	-0.4
4,981,470	+		GFF4982	0.24	-1.9
4,981,470	+		GFF4982	0.24	-1.0
4,981,478	-		GFF4982	0.24	-0.1
4,981,478	-		GFF4982	0.24	+0.8
4,981,478	-		GFF4982	0.24	-1.9
4,981,485	+		GFF4982	0.25	+0.4
4,981,488	-		GFF4982	0.25	-0.3
4,981,490	+		GFF4982	0.25	-0.3
4,981,495	+		GFF4982	0.26	+0.1
4,981,505	+		GFF4982	0.26	+0.2
4,981,516	+		GFF4982	0.27	-0.2
4,981,516	+		GFF4982	0.27	-0.2
4,981,516	+		GFF4982	0.27	+0.0
4,981,524	-		GFF4982	0.28	-0.2
4,981,524	-		GFF4982	0.28	+0.6
4,981,524	-		GFF4982	0.28	-0.5
4,981,537	+		GFF4982	0.29	+0.9
4,981,567	-		GFF4982	0.31	-0.1
4,981,586	-		GFF4982	0.33	+0.6
4,981,586	-		GFF4982	0.33	+1.0
4,981,597	+		GFF4982	0.34	-2.1
4,981,615	+		GFF4982	0.35	-0.7
4,981,637	+		GFF4982	0.37	+0.9
4,981,637	+		GFF4982	0.37	-0.7
4,981,645	-		GFF4982	0.37	-0.7
4,981,645	-		GFF4982	0.37	-1.0
4,981,645	-		GFF4982	0.37	+0.1
4,981,647	-		GFF4982	0.38	+0.8
4,981,664	-		GFF4982	0.39	+0.2
4,981,666	+		GFF4982	0.39	+1.0
4,981,674	-		GFF4982	0.40	+0.3
4,981,695	-		GFF4982	0.41	+1.5
4,981,698	+		GFF4982	0.42	-2.2
4,981,700	-		GFF4982	0.42	-0.5
4,981,700	-		GFF4982	0.42	+0.4
4,981,716	-		GFF4982	0.43	-0.4
4,981,717	-		GFF4982	0.43	-0.6
4,981,718	-		GFF4982	0.43	-0.9
4,981,718	-		GFF4982	0.43	-0.5
4,981,741	+		GFF4982	0.45	+1.7
4,981,755	+		GFF4982	0.46	+0.1
4,981,755	+		GFF4982	0.46	+0.3
4,981,755	+		GFF4982	0.46	-0.9
4,981,755	+		GFF4982	0.46	-1.7
4,981,755	+		GFF4982	0.46	+0.5
4,981,755	+		GFF4982	0.46	+0.4
4,981,755	+		GFF4982	0.46	+0.7
4,981,755	+		GFF4982	0.46	-0.5
4,981,763	-		GFF4982	0.47	+0.7
4,981,763	-		GFF4982	0.47	+1.4
4,981,763	-		GFF4982	0.47	-2.2
4,981,763	-		GFF4982	0.47	+0.1
4,981,763	-		GFF4982	0.47	+0.4
4,981,763	-		GFF4982	0.47	+0.9
4,981,786	+		GFF4982	0.49	-0.1
4,981,796	+		GFF4982	0.49	-0.1
4,981,801	+		GFF4982	0.50	-0.3
4,981,804	-		GFF4982	0.50	-0.1
4,981,804	-		GFF4982	0.50	-0.6
4,981,804	-		GFF4982	0.50	-1.2
4,981,809	-		GFF4982	0.50	+1.0
4,981,822	+		GFF4982	0.51	-0.2
4,981,822	+		GFF4982	0.51	+1.1
4,981,847	+		GFF4982	0.53	+0.6
4,981,867	+		GFF4982	0.55	+0.6
4,981,872	+		GFF4982	0.55	+1.4
4,981,877	+		GFF4982	0.56	-0.3
4,981,877	+		GFF4982	0.56	-0.1
4,981,877	+		GFF4982	0.56	-2.1
4,981,877	+		GFF4982	0.56	+0.5
4,981,877	+		GFF4982	0.56	-0.3
4,981,877	+		GFF4982	0.56	+1.5
4,981,877	+		GFF4982	0.56	-1.2
4,981,882	+		GFF4982	0.56	+0.6
4,981,882	-		GFF4982	0.56	-1.0
4,981,885	-		GFF4982	0.56	-0.1
4,981,885	-		GFF4982	0.56	+1.2
4,981,885	-		GFF4982	0.56	+1.0
4,981,885	-		GFF4982	0.56	-1.4
4,981,885	-		GFF4982	0.56	+0.6
4,981,887	+		GFF4982	0.57	-1.2
4,981,887	+		GFF4982	0.57	-0.9
4,981,887	+		GFF4982	0.57	-1.2
4,981,895	-		GFF4982	0.57	+1.4
4,981,895	-		GFF4982	0.57	+0.4
4,981,895	-		GFF4982	0.57	+1.4
4,981,895	-		GFF4982	0.57	-2.2
4,981,935	+		GFF4982	0.60	+1.1
4,981,937	-		GFF4982	0.61	+0.6
4,981,943	-		GFF4982	0.61	+0.8
4,981,950	+		GFF4982	0.62	-1.2
4,981,950	+		GFF4982	0.62	-1.4
4,981,950	+		GFF4982	0.62	-0.6
4,981,950	+		GFF4982	0.62	-1.4
4,981,952	+		GFF4982	0.62	+0.1
4,981,958	-		GFF4982	0.62	-0.7
4,981,958	-		GFF4982	0.62	-0.8
4,981,958	-		GFF4982	0.62	+1.6
4,981,958	-		GFF4982	0.62	+0.6
4,981,958	-		GFF4982	0.62	+1.6
4,982,006	+		GFF4982	0.66	+0.1
4,982,014	-		GFF4982	0.67	-1.1
4,982,014	-		GFF4982	0.67	-0.6
4,982,017	+		GFF4982	0.67	+0.7
4,982,038	-		GFF4982	0.68	-1.7
4,982,046	-		GFF4982	0.69	+1.1
4,982,055	+		GFF4982	0.70	+0.2
4,982,056	+		GFF4982	0.70	+0.4
4,982,056	-		GFF4982	0.70	+0.4
4,982,056	-		GFF4982	0.70	+1.0
4,982,061	+		GFF4982	0.70	+1.2
4,982,064	-		GFF4982	0.71	+0.5
4,982,087	+		GFF4982	0.72	-2.2
4,982,092	+		GFF4982	0.73	+0.1
4,982,095	-		GFF4982	0.73	+0.5
4,982,099	+		GFF4982	0.73	+0.9
4,982,107	-		GFF4982	0.74	-0.6
4,982,112	-		GFF4982	0.74	+0.9
4,982,112	-		GFF4982	0.74	+0.6
4,982,115	-		GFF4982	0.75	+0.7
4,982,115	-		GFF4982	0.75	+0.9
4,982,133	-		GFF4982	0.76	-1.4
4,982,193	+		GFF4982	0.81	-0.2
4,982,193	-		GFF4982	0.81	+1.1
4,982,197	-		GFF4982	0.81	+1.5
4,982,210	+		GFF4982	0.82	-1.2
4,982,218	-		GFF4982	0.83	+0.5
4,982,223	-		GFF4982	0.83	-0.5
4,982,229	+		GFF4982	0.84	-0.5
4,982,237	-		GFF4982	0.84	-0.6
4,982,237	-		GFF4982	0.84	+0.4
4,982,247	+		GFF4982	0.85	+0.1
4,982,255	-		GFF4982	0.86	+0.8
4,982,255	-		GFF4982	0.86	-0.1
4,982,255	-		GFF4982	0.86	+1.2
4,982,291	+		GFF4982	0.88	+0.1
4,982,291	+		GFF4982	0.88	-0.5
4,982,296	+		GFF4982	0.89	+0.6
4,982,299	-		GFF4982	0.89	+0.9
4,982,309	-		GFF4982	0.90	+0.5
4,982,311	+				-0.5
4,982,314	-				+0.2
4,982,335	+				+0.6
4,982,335	+				-0.3
4,982,348	-				+0.6
4,982,359	+				+0.4
4,982,359	+				-1.7
4,982,359	+				+0.6
4,982,364	+				-0.2
4,982,364	+				-0.4
4,982,367	-				-0.2
4,982,367	-				+0.2
4,982,367	-				+0.3
4,982,367	-				+0.6
4,982,367	-				+0.8
4,982,377	-				-0.5
4,982,377	-				-0.3
4,982,392	+				-2.2
4,982,408	+				-1.4
4,982,423	+				-2.8
4,982,431	-				+0.3
4,982,431	-				-1.7
4,982,438	-				-0.7
4,982,479	+				+0.3
4,982,490	+				+0.8
4,982,490	+				+1.0
4,982,490	+				+0.3
4,982,490	+				+1.1
4,982,490	+				+0.9
4,982,490	+				+0.3
4,982,490	+				-0.6
4,982,498	-				-0.0
4,982,498	-				-0.6
4,982,498	-				-0.4
4,982,498	-				+0.9
4,982,507	-				-0.5
4,982,542	-				+1.0
4,982,544	-				-0.7
4,982,547	+				+0.0
4,982,562	-				-0.4
4,982,565	-				+0.9
4,982,565	-				+0.1
4,982,582	+				+1.0
4,982,590	-				+0.2
4,982,597	-				-1.6
4,982,599	+				+0.1
4,982,599	+				+0.1
4,982,601	+				+0.5
4,982,601	+				-0.6
4,982,604	+				+1.1
4,982,604	+				-0.3
4,982,607	-				+0.2
4,982,609	-				-1.7
4,982,612	-				-0.6
4,982,612	-				-0.9
4,982,632	+				+0.8
4,982,651	+				-0.9
4,982,651	+				+0.3
4,982,699	+				-0.2
4,982,704	+				-0.7
4,982,719	+				+0.9
4,982,719	+				+1.1
4,982,727	-				+0.4
4,982,742	-				+1.1
4,982,742	-				+1.3
4,982,746	+				+1.0
4,982,754	-				-0.7
4,982,754	-				+1.4
4,982,754	-				-0.3
4,982,756	+				-1.0
4,982,794	-		GFF4983	0.10	-1.3
4,982,851	-		GFF4983	0.12	-0.6
4,982,870	-		GFF4983	0.13	-0.2
4,982,893	+		GFF4983	0.14	+1.2
4,982,918	+		GFF4983	0.15	+0.6
4,982,918	-		GFF4983	0.15	+1.5
4,983,021	+		GFF4983	0.18	+0.1
4,983,021	+		GFF4983	0.18	-0.7
4,983,021	+		GFF4983	0.18	-0.5
4,983,021	+		GFF4983	0.18	+1.1
4,983,021	+		GFF4983	0.18	+0.7
4,983,021	+		GFF4983	0.18	-0.2
4,983,021	+		GFF4983	0.18	-0.6
4,983,021	+		GFF4983	0.18	-0.0
4,983,022	+		GFF4983	0.18	-0.7
4,983,022	+		GFF4983	0.18	-0.2
4,983,029	-		GFF4983	0.19	-1.6
4,983,029	-		GFF4983	0.19	+0.8
4,983,029	-		GFF4983	0.19	-0.6
4,983,029	-		GFF4983	0.19	+0.8
4,983,029	-		GFF4983	0.19	-0.6
4,983,030	-		GFF4983	0.19	+0.7
4,983,030	-		GFF4983	0.19	+1.0
4,983,035	-		GFF4983	0.19	-0.1
4,983,038	+		GFF4983	0.19	-1.2
4,983,038	+		GFF4983	0.19	-0.0
4,983,038	+		GFF4983	0.19	-0.8
4,983,038	+		GFF4983	0.19	-1.4
4,983,038	+		GFF4983	0.19	-0.1
4,983,046	-		GFF4983	0.19	-1.0
4,983,046	-		GFF4983	0.19	+0.4
4,983,073	-		GFF4983	0.20	-0.5
4,983,096	+		GFF4983	0.21	+0.2
4,983,104	-		GFF4983	0.21	-0.4
4,983,125	-		GFF4983	0.22	+0.3
4,983,135	-		GFF4983	0.22	-0.6
4,983,153	-		GFF4983	0.23	+0.4
4,983,153	-		GFF4983	0.23	-1.6
4,983,169	+		GFF4983	0.24	+0.3
4,983,169	+		GFF4983	0.24	-0.5
4,983,177	+		GFF4983	0.24	-0.6
4,983,177	-		GFF4983	0.24	+0.3
4,983,177	-		GFF4983	0.24	+0.1
4,983,187	-		GFF4983	0.24	-2.0
4,983,233	-		GFF4983	0.26	+0.2
4,983,243	-		GFF4983	0.26	-0.0
4,983,293	+		GFF4983	0.28	-0.9
4,983,293	+		GFF4983	0.28	-0.3
4,983,293	+		GFF4983	0.28	-0.7
4,983,301	-		GFF4983	0.28	+0.4
4,983,310	+		GFF4983	0.29	+0.2
4,983,318	-		GFF4983	0.29	+1.2
4,983,327	+		GFF4983	0.29	+1.0
4,983,345	-		GFF4983	0.30	+0.6
4,983,349	+		GFF4983	0.30	+0.5
4,983,357	-		GFF4983	0.30	+0.5
4,983,359	-		GFF4983	0.30	-0.1
4,983,367	-		GFF4983	0.31	-2.1
4,983,379	-		GFF4983	0.31	-0.4
4,983,379	-		GFF4983	0.31	+0.9
4,983,381	-		GFF4983	0.31	+1.1
4,983,393	-		GFF4983	0.32	-0.8
4,983,393	-		GFF4983	0.32	+0.8
4,983,413	+		GFF4983	0.32	+0.2
4,983,426	-		GFF4983	0.33	+1.4