Strain Fitness in Sphingobium sp. HT1-2 around GFF2691

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,712,389	-		GFF2690	0.13	+0.7
2,712,389	-		GFF2690	0.13	-1.2
2,712,389	-		GFF2690	0.13	-1.8
2,712,422	+		GFF2690	0.16	+0.5
2,712,422	+		GFF2690	0.16	-0.0
2,712,426	+		GFF2690	0.16	-0.3
2,712,426	+		GFF2690	0.16	+0.3
2,712,429	-		GFF2690	0.17	+0.3
2,712,430	-		GFF2690	0.17	+0.2
2,712,430	-		GFF2690	0.17	+0.4
2,712,430	-		GFF2690	0.17	-0.9
2,712,436	+		GFF2690	0.17	-0.0
2,712,436	+		GFF2690	0.17	+0.5
2,712,439	-		GFF2690	0.17	-0.8
2,712,444	+		GFF2690	0.18	-0.4
2,712,444	+		GFF2690	0.18	-0.7
2,712,444	+		GFF2690	0.18	+0.0
2,712,444	+		GFF2690	0.18	+0.9
2,712,444	+		GFF2690	0.18	+0.8
2,712,452	-		GFF2690	0.19	-0.0
2,712,452	-		GFF2690	0.19	+0.8
2,712,452	-		GFF2690	0.19	-1.3
2,712,452	-		GFF2690	0.19	+0.9
2,712,452	-		GFF2690	0.19	-1.2
2,712,452	-		GFF2690	0.19	-0.1
2,712,452	-		GFF2690	0.19	+0.6
2,712,460	+		GFF2690	0.19	+1.3
2,712,468	-		GFF2690	0.20	-0.5
2,712,490	-		GFF2690	0.22	-2.0
2,712,491	+		GFF2690	0.22	-0.2
2,712,492	+		GFF2690	0.22	-1.9
2,712,495	-		GFF2690	0.22	+0.2
2,712,501	+		GFF2690	0.23	-0.3
2,712,501	+		GFF2690	0.23	-1.7
2,712,501	+		GFF2690	0.23	+0.1
2,712,501	+		GFF2690	0.23	-1.0
2,712,501	+		GFF2690	0.23	+0.4
2,712,501	+		GFF2690	0.23	-1.0
2,712,501	+		GFF2690	0.23	+2.3
2,712,501	+		GFF2690	0.23	+1.1
2,712,509	-		GFF2690	0.23	-0.8
2,712,509	-		GFF2690	0.23	-0.5
2,712,509	-		GFF2690	0.23	-2.1
2,712,509	-		GFF2690	0.23	+1.1
2,712,524	+		GFF2690	0.25	+0.4
2,712,524	+		GFF2690	0.25	-0.9
2,712,536	+		GFF2690	0.26	-1.2
2,712,542	-		GFF2690	0.26	+0.4
2,712,542	-		GFF2690	0.26	+0.3
2,712,550	+		GFF2690	0.27	+1.1
2,712,552	-		GFF2690	0.27	+1.6
2,712,562	-		GFF2690	0.28	+1.2
2,712,570	+		GFF2690	0.29	+0.7
2,712,591	+		GFF2690	0.31	-1.3
2,712,596	+		GFF2690	0.31	-0.9
2,712,598	+		GFF2690	0.31	+0.6
2,712,598	+		GFF2690	0.31	+0.4
2,712,606	+		GFF2690	0.32	-1.5
2,712,606	+		GFF2690	0.32	-0.6
2,712,606	-		GFF2690	0.32	-0.3
2,712,614	-		GFF2690	0.33	-1.2
2,712,624	+		GFF2690	0.33	+0.4
2,712,631	-		GFF2690	0.34	-0.3
2,712,638	-		GFF2690	0.35	+0.9
2,712,642	+		GFF2690	0.35	-0.3
2,712,647	+		GFF2690	0.35	+0.1
2,712,647	+		GFF2690	0.35	-0.1
2,712,648	+		GFF2690	0.35	+1.6
2,712,655	-		GFF2690	0.36	-0.6
2,712,655	-		GFF2690	0.36	-0.6
2,712,662	+		GFF2690	0.37	-0.8
2,712,670	-		GFF2690	0.37	+1.1
2,712,672	+		GFF2690	0.38	-1.2
2,712,690	+		GFF2690	0.39	+0.6
2,712,696	-		GFF2690	0.40	-0.4
2,712,713	+		GFF2690	0.41	+0.7
2,712,713	+		GFF2690	0.41	-1.4
2,712,713	+		GFF2690	0.41	-1.5
2,712,713	-		GFF2690	0.41	-0.9
2,712,718	+		GFF2690	0.42	-0.7
2,712,723	+		GFF2690	0.42	-2.3
2,712,726	-		GFF2690	0.42	-0.2
2,712,731	-		GFF2690	0.43	+0.8
2,712,731	-		GFF2690	0.43	+0.8
2,712,731	-		GFF2690	0.43	-2.6
2,712,736	-		GFF2690	0.43	+0.4
2,712,736	-		GFF2690	0.43	+0.8
2,712,743	+		GFF2690	0.44	-0.3
2,712,747	+		GFF2690	0.44	+1.2
2,712,747	+		GFF2690	0.44	-0.0
2,712,753	+		GFF2690	0.45	-0.1
2,712,753	+		GFF2690	0.45	+0.4
2,712,755	-		GFF2690	0.45	-0.3
2,712,755	-		GFF2690	0.45	-0.2
2,712,755	-		GFF2690	0.45	-0.5
2,712,755	-		GFF2690	0.45	-1.3
2,712,772	+		GFF2690	0.46	-2.6
2,712,780	-		GFF2690	0.47	-2.9
2,712,780	-		GFF2690	0.47	-0.9
2,712,780	-		GFF2690	0.47	-0.3
2,712,790	+		GFF2690	0.48	-1.3
2,712,790	+		GFF2690	0.48	+0.1
2,712,798	-		GFF2690	0.48	-0.4
2,712,800	+		GFF2690	0.49	-1.1
2,712,800	+		GFF2690	0.49	+0.3
2,712,800	+		GFF2690	0.49	-1.5
2,712,805	+		GFF2690	0.49	-1.8
2,712,808	-		GFF2690	0.49	-1.4
2,712,808	-		GFF2690	0.49	-1.8
2,712,808	-		GFF2690	0.49	+0.9
2,712,808	-		GFF2690	0.49	-1.1
2,712,808	-		GFF2690	0.49	+0.0
2,712,819	-		GFF2690	0.50	+1.5
2,712,823	+		GFF2690	0.51	-0.7
2,712,825	+		GFF2690	0.51	-1.3
2,712,840	-		GFF2690	0.52	-0.5
2,712,861	+		GFF2690	0.54	-0.7
2,712,865	+		GFF2690	0.54	+1.8
2,712,874	-		GFF2690	0.55	-1.1
2,712,888	+		GFF2690	0.56	-0.5
2,712,894	-		GFF2690	0.57	+0.2
2,712,904	-		GFF2690	0.58	+1.2
2,712,913	+		GFF2690	0.58	-0.4
2,712,913	+		GFF2690	0.58	-0.0
2,712,915	+		GFF2690	0.59	-0.1
2,712,915	+		GFF2690	0.59	-0.9
2,712,915	+		GFF2690	0.59	-0.4
2,712,915	+		GFF2690	0.59	+1.9
2,712,921	-		GFF2690	0.59	-1.2
2,712,921	-		GFF2690	0.59	+0.4
2,712,923	-		GFF2690	0.59	+1.0
2,712,923	-		GFF2690	0.59	+0.4
2,712,923	-		GFF2690	0.59	-0.5
2,712,923	-		GFF2690	0.59	+0.5
2,712,923	-		GFF2690	0.59	-1.5
2,712,925	-		GFF2690	0.59	+0.6
2,712,925	-		GFF2690	0.59	-0.9
2,712,931	-		GFF2690	0.60	+0.5
2,712,991	+		GFF2690	0.65	-1.3
2,712,991	+		GFF2690	0.65	-1.3
2,712,994	-		GFF2690	0.65	-1.5
2,712,997	-		GFF2690	0.66	-0.9
2,712,997	-		GFF2690	0.66	+0.8
2,713,033	-		GFF2690	0.69	-0.7
2,713,033	-		GFF2690	0.69	+0.0
2,713,050	-		GFF2690	0.70	+0.3
2,713,051	+		GFF2690	0.70	-1.7
2,713,051	+		GFF2690	0.70	+0.1
2,713,051	+		GFF2690	0.70	+0.7
2,713,051	+		GFF2690	0.70	-0.7
2,713,051	+		GFF2690	0.70	-2.0
2,713,051	+		GFF2690	0.70	+0.4
2,713,051	+		GFF2690	0.70	-0.9
2,713,052	+		GFF2690	0.70	-1.2
2,713,054	-		GFF2690	0.71	-1.1
2,713,059	-		GFF2690	0.71	-1.7
2,713,059	-		GFF2690	0.71	+0.7
2,713,059	-		GFF2690	0.71	+0.5
2,713,059	-		GFF2690	0.71	+2.0
2,713,059	-		GFF2690	0.71	+0.1
2,713,059	-		GFF2690	0.71	-0.5
2,713,111	+		GFF2690	0.76	+1.0
2,713,111	+		GFF2690	0.76	-1.0
2,713,119	-		GFF2690	0.76	-0.8
2,713,124	-		GFF2690	0.77	+1.5
2,713,133	+		GFF2690	0.77	-1.2
2,713,138	+		GFF2690	0.78	+0.3
2,713,141	-		GFF2690	0.78	-1.1
2,713,146	-		GFF2690	0.79	+1.1
2,713,147	-		GFF2690	0.79	-0.8
2,713,151	+		GFF2690	0.79	+0.2
2,713,166	+		GFF2690	0.80	+0.4
2,713,184	-		GFF2690	0.82	+0.3
2,713,191	-		GFF2690	0.83	+1.1
2,713,191	-		GFF2690	0.83	-0.2
2,713,191	-		GFF2690	0.83	-1.5
2,713,191	-		GFF2690	0.83	-1.6
2,713,243	+		GFF2690	0.87	-2.0
2,713,244	-		GFF2690	0.87	-0.4
2,713,253	+		GFF2690	0.88	+0.3
2,713,253	+		GFF2690	0.88	-0.1
2,713,260	+		GFF2690	0.88	-0.3
2,713,261	-		GFF2690	0.89	-0.5
2,713,261	-		GFF2690	0.89	-0.7
2,713,274	+		GFF2690	0.90	-1.7
2,713,274	+		GFF2690	0.90	-2.0
2,713,276	+		GFF2690	0.90	-1.7
2,713,276	+		GFF2690	0.90	+0.6
2,713,277	-				-0.4
2,713,290	+				-1.1
2,713,298	-				+0.4
2,713,307	+				-0.7
2,713,307	+				+0.4
2,713,308	-				+0.0
2,713,309	+				+2.1
2,713,309	+				+0.1
2,713,315	-				+1.7
2,713,315	-				+0.3
2,713,330	+				-0.4
2,713,333	-				-1.7
2,713,344	+				+1.1
2,713,344	+				-0.9
2,713,348	-				-1.3
2,713,354	+				-1.5
2,713,356	-				-0.5
2,713,366	+				+0.0
2,713,366	+				-0.5
2,713,374	-				-0.8
2,713,374	-				-0.3
2,713,374	-				-0.3
2,713,376	-				+0.3
2,713,384	-				-0.3
2,713,384	-				-0.4
2,713,395	+				+0.0
2,713,397	-				+0.3
2,713,422	-				+1.4
2,713,428	-				+1.3
2,713,428	-				-0.5
2,713,428	-				-0.0
2,713,430	+				-1.0
2,713,430	+				+0.5
2,713,430	+				-0.2
2,713,430	+				-1.3
2,713,435	+				-1.4
2,713,438	-				+0.3
2,713,438	-				-1.5
2,713,438	-				+1.2
2,713,438	-				+0.1
2,713,438	-				+1.3
2,713,452	+				+0.8
2,713,457	+				+0.3
2,713,460	-				+0.6
2,713,460	-				+1.6
2,713,460	-				-1.5
2,713,460	-				+0.5
2,713,460	-				+1.4
2,713,460	-				-0.2
2,713,470	+				-1.5
2,713,481	-				-1.3
2,713,490	-				+0.0
2,713,492	+				+0.6
2,713,492	+				-0.3
2,713,536	+		GFF2691	0.12	-0.5
2,713,582	+		GFF2691	0.15	-0.7
2,713,590	-		GFF2691	0.16	+0.2
2,713,590	-		GFF2691	0.16	-0.5
2,713,590	-		GFF2691	0.16	-2.8
2,713,590	-		GFF2691	0.16	+0.2
2,713,594	+		GFF2691	0.16	+0.3
2,713,607	-		GFF2691	0.17	-1.4
2,713,612	+		GFF2691	0.18	-0.1
2,713,617	+		GFF2691	0.18	-0.8
2,713,620	-		GFF2691	0.18	+0.2
2,713,620	-		GFF2691	0.18	+1.3
2,713,620	-		GFF2691	0.18	-0.3
2,713,620	-		GFF2691	0.18	-0.4
2,713,625	-		GFF2691	0.19	-1.4
2,713,627	+		GFF2691	0.19	+0.3
2,713,632	+		GFF2691	0.19	+0.2
2,713,640	-		GFF2691	0.20	+0.2
2,713,652	+		GFF2691	0.21	-2.2
2,713,660	+		GFF2691	0.21	+0.0
2,713,687	+		GFF2691	0.23	-0.6
2,713,695	-		GFF2691	0.24	-1.7
2,713,695	-		GFF2691	0.24	-0.1
2,713,712	-		GFF2691	0.25	-0.2
2,713,713	+		GFF2691	0.26	-0.3
2,713,716	-		GFF2691	0.26	-1.1
2,713,716	-		GFF2691	0.26	+0.9
2,713,723	+		GFF2691	0.26	-0.2
2,713,723	+		GFF2691	0.26	-0.3
2,713,723	+		GFF2691	0.26	-0.6
2,713,726	-		GFF2691	0.27	-2.0
2,713,731	-		GFF2691	0.27	+0.3
2,713,731	-		GFF2691	0.27	-1.2
2,713,767	+		GFF2691	0.30	+0.4
2,713,774	+		GFF2691	0.30	-0.0
2,713,775	-		GFF2691	0.30	-1.6
2,713,782	-		GFF2691	0.31	-1.6
2,713,784	-		GFF2691	0.31	-0.9
2,713,786	+		GFF2691	0.31	-0.8
2,713,787	-		GFF2691	0.31	-0.6
2,713,801	+		GFF2691	0.32	+0.7
2,713,801	+		GFF2691	0.32	-1.4
2,713,801	+		GFF2691	0.32	+0.9
2,713,809	-		GFF2691	0.33	+0.5
2,713,809	-		GFF2691	0.33	+1.0
2,713,809	-		GFF2691	0.33	+0.0
2,713,809	-		GFF2691	0.33	-1.1
2,713,810	-		GFF2691	0.33	-2.9
2,713,811	+		GFF2691	0.33	+0.2
2,713,819	-		GFF2691	0.34	-0.4
2,713,819	-		GFF2691	0.34	-2.0
2,713,835	+		GFF2691	0.35	+0.1
2,713,843	-		GFF2691	0.36	-0.5
2,713,843	-		GFF2691	0.36	-0.8
2,713,848	-		GFF2691	0.36	-0.0
2,713,869	-		GFF2691	0.38	-0.0
2,713,911	-		GFF2691	0.41	+0.4
2,713,911	-		GFF2691	0.41	+0.9
2,713,946	-		GFF2691	0.44	-1.9
2,713,947	-		GFF2691	0.44	-0.2
2,713,963	-		GFF2691	0.45	-0.4
2,713,963	-		GFF2691	0.45	+0.2
2,713,973	-		GFF2691	0.46	+0.1
2,713,973	-		GFF2691	0.46	+0.4
2,713,990	+		GFF2691	0.47	-0.8
2,713,990	+		GFF2691	0.47	+0.4
2,713,993	-		GFF2691	0.48	+0.3
2,714,008	+		GFF2691	0.49	+0.6
2,714,008	+		GFF2691	0.49	-0.7
2,714,016	-		GFF2691	0.49	+0.3
2,714,024	+		GFF2691	0.50	+0.3
2,714,032	-		GFF2691	0.51	-1.4
2,714,032	-		GFF2691	0.51	-0.8
2,714,050	+		GFF2691	0.52	-0.7
2,714,050	+		GFF2691	0.52	+1.4
2,714,050	+		GFF2691	0.52	-0.4
2,714,050	+		GFF2691	0.52	-1.3
2,714,050	+		GFF2691	0.52	+0.3
2,714,050	+		GFF2691	0.52	-0.1
2,714,050	+		GFF2691	0.52	+0.4
2,714,050	+		GFF2691	0.52	+0.4
2,714,050	+		GFF2691	0.52	-0.3
2,714,058	-		GFF2691	0.53	-1.8
2,714,058	-		GFF2691	0.53	-0.7
2,714,058	-		GFF2691	0.53	-0.7
2,714,058	-		GFF2691	0.53	+0.6
2,714,058	-		GFF2691	0.53	-0.0
2,714,058	-		GFF2691	0.53	+0.5
2,714,058	-		GFF2691	0.53	-0.4
2,714,058	-		GFF2691	0.53	+0.2
2,714,058	-		GFF2691	0.53	-0.2
2,714,058	-		GFF2691	0.53	-0.3
2,714,058	-		GFF2691	0.53	-0.8
2,714,066	+		GFF2691	0.53	+0.2
2,714,074	-		GFF2691	0.54	-1.2
2,714,092	+		GFF2691	0.55	-0.2
2,714,097	+		GFF2691	0.56	+1.2
2,714,105	-		GFF2691	0.56	-2.0
2,714,122	+		GFF2691	0.58	+0.8
2,714,122	+		GFF2691	0.58	+0.1
2,714,122	+		GFF2691	0.58	-0.1
2,714,122	+		GFF2691	0.58	+1.0
2,714,131	+		GFF2691	0.58	+2.0
2,714,139	-		GFF2691	0.59	-0.6
2,714,139	-		GFF2691	0.59	+0.3
2,714,152	+		GFF2691	0.60	+0.8
2,714,154	+		GFF2691	0.60	+0.4
2,714,160	-		GFF2691	0.61	-1.4
2,714,160	-		GFF2691	0.61	+0.1
2,714,178	-		GFF2691	0.62	+0.3
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