Strain Fitness in Sphingobium sp. HT1-2 around GFF2396

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,416,025	-		GFF2395	0.31	-0.6
2,416,032	+		GFF2395	0.32	-0.8
2,416,032	+		GFF2395	0.32	+0.5
2,416,040	-		GFF2395	0.33	-1.4
2,416,040	-		GFF2395	0.33	-3.0
2,416,109	+		GFF2395	0.39	-0.8
2,416,119	+		GFF2395	0.39	+1.0
2,416,119	+		GFF2395	0.39	-0.6
2,416,119	+		GFF2395	0.39	-0.5
2,416,127	-		GFF2395	0.40	-0.5
2,416,127	-		GFF2395	0.40	-0.7
2,416,127	-		GFF2395	0.40	+1.1
2,416,138	+		GFF2395	0.41	+0.0
2,416,146	-		GFF2395	0.42	-1.9
2,416,170	-		GFF2395	0.44	-0.6
2,416,176	+		GFF2395	0.44	-1.0
2,416,178	+		GFF2395	0.45	+0.6
2,416,186	-		GFF2395	0.45	-1.9
2,416,186	-		GFF2395	0.45	-0.1
2,416,186	-		GFF2395	0.45	-0.6
2,416,193	+		GFF2395	0.46	-1.0
2,416,198	-		GFF2395	0.46	-0.7
2,416,201	-		GFF2395	0.47	+1.0
2,416,214	-		GFF2395	0.48	-0.1
2,416,221	+		GFF2395	0.48	+0.8
2,416,221	+		GFF2395	0.48	-1.0
2,416,229	-		GFF2395	0.49	-0.2
2,416,229	-		GFF2395	0.49	-0.6
2,416,229	-		GFF2395	0.49	-0.2
2,416,230	-		GFF2395	0.49	-0.9
2,416,230	-		GFF2395	0.49	+0.2
2,416,230	-		GFF2395	0.49	-0.0
2,416,240	+		GFF2395	0.50	-2.5
2,416,252	+		GFF2395	0.51	+0.2
2,416,308	-		GFF2395	0.56	+0.7
2,416,331	+		GFF2395	0.58	-0.9
2,416,339	-		GFF2395	0.59	-0.4
2,416,339	-		GFF2395	0.59	-1.9
2,416,372	-		GFF2395	0.62	-1.8
2,416,382	+		GFF2395	0.62	-0.0
2,416,390	-		GFF2395	0.63	+0.1
2,416,390	-		GFF2395	0.63	-0.6
2,416,390	-		GFF2395	0.63	-0.3
2,416,404	-		GFF2395	0.64	-0.2
2,416,406	-		GFF2395	0.64	-0.5
2,416,418	+		GFF2395	0.66	-1.3
2,416,467	+		GFF2395	0.70	-0.6
2,416,477	-		GFF2395	0.71	-0.7
2,416,493	+		GFF2395	0.72	-0.3
2,416,493	+		GFF2395	0.72	-1.9
2,416,493	+		GFF2395	0.72	-0.4
2,416,501	-		GFF2395	0.73	-1.6
2,416,501	-		GFF2395	0.73	-0.5
2,416,501	-		GFF2395	0.73	-0.9
2,416,563	+		GFF2395	0.78	+0.3
2,416,576	+		GFF2395	0.79	-2.2
2,416,581	+		GFF2395	0.80	-0.1
2,416,589	-		GFF2395	0.80	+0.8
2,416,618	+		GFF2395	0.83	+1.0
2,416,638	+		GFF2395	0.85	+1.0
2,416,638	+		GFF2395	0.85	+1.1
2,416,638	+		GFF2395	0.85	-0.4
2,416,646	-		GFF2395	0.85	-0.3
2,416,646	-		GFF2395	0.85	+1.0
2,416,646	-		GFF2395	0.85	+1.6
2,416,684	-		GFF2395	0.89	+0.6
2,416,685	-		GFF2395	0.89	+0.1
2,416,685	-		GFF2395	0.89	-2.1
2,416,700	+				-0.4
2,416,700	+				-1.9
2,416,700	+				-1.3
2,416,700	+				+0.3
2,416,700	+				-0.5
2,416,705	+				+0.2
2,416,705	+				+0.8
2,416,705	+				-0.6
2,416,705	+				-0.8
2,416,708	-				-1.0
2,416,708	-				-0.7
2,416,708	-				+0.1
2,416,708	-				-0.7
2,416,708	-				+0.8
2,416,708	-				+0.1
2,416,708	-				-0.4
2,416,710	+				+0.8
2,416,713	-				-0.1
2,416,713	-				+0.3
2,416,720	-				+1.0
2,416,736	+				+0.2
2,416,736	+				-1.4
2,416,749	-				-0.6
2,416,751	-				+0.2
2,416,762	+				-2.2
2,416,798	+				+0.6
2,416,818	+				+0.6
2,416,818	+				-0.2
2,416,819	+				+1.4
2,416,820	+				+0.5
2,416,820	+				-0.3
2,416,820	+				-0.1
2,416,826	-				-1.9
2,416,828	-				+0.4
2,416,868	+				-0.8
2,416,901	+				+0.6
2,416,928	-				-0.1
2,416,932	+				-0.4
2,416,933	+				-0.5
2,416,933	-				-0.5
2,416,940	-				-0.6
2,416,955	-				-0.6
2,416,967	+				-2.0
2,416,975	-				-0.2
2,417,009	+				+0.3
2,417,041	+				-0.1
2,417,057	-				-0.2
2,417,079	-				+0.5
2,417,111	-				+0.4
2,417,117	+				-0.8
2,417,117	+				+0.0
2,417,117	+				+0.8
2,417,117	+				-1.2
2,417,117	+				+2.2
2,417,117	+				+1.2
2,417,125	-				-0.7
2,417,125	-				+0.4
2,417,125	-				+0.4
2,417,125	-				+1.1
2,417,125	-				-0.5
2,417,125	-				-0.4
2,417,125	-				-0.9
2,417,125	-				-0.2
2,417,125	-				+0.3
2,417,146	-				-0.3
2,417,146	-				+0.6
2,417,154	+				-1.0
2,417,197	-		GFF2396	0.12	-0.7
2,417,213	+		GFF2396	0.13	-3.3
2,417,248	+		GFF2396	0.15	-0.4
2,417,256	-		GFF2396	0.16	+0.5
2,417,262	+		GFF2396	0.16	-0.2
2,417,262	+		GFF2396	0.16	-0.5
2,417,270	-		GFF2396	0.17	-1.1
2,417,270	-		GFF2396	0.17	-1.2
2,417,270	-		GFF2396	0.17	+0.4
2,417,275	-		GFF2396	0.17	+1.2
2,417,286	+		GFF2396	0.18	-0.0
2,417,307	-		GFF2396	0.19	+0.4
2,417,312	-		GFF2396	0.20	-1.4
2,417,312	-		GFF2396	0.20	+0.4
2,417,322	-		GFF2396	0.20	+1.5
2,417,325	-		GFF2396	0.20	-0.2
2,417,344	+		GFF2396	0.22	-0.9
2,417,344	+		GFF2396	0.22	+0.0
2,417,344	+		GFF2396	0.22	-0.4
2,417,344	+		GFF2396	0.22	+1.6
2,417,352	-		GFF2396	0.22	+1.3
2,417,352	-		GFF2396	0.22	-0.5
2,417,352	-		GFF2396	0.22	-0.9
2,417,352	-		GFF2396	0.22	-1.5
2,417,352	-		GFF2396	0.22	+0.4
2,417,373	-		GFF2396	0.24	-0.4
2,417,376	+		GFF2396	0.24	-1.2
2,417,378	+		GFF2396	0.24	-2.0
2,417,385	-		GFF2396	0.24	-1.6
2,417,406	-		GFF2396	0.26	-0.9
2,417,420	-		GFF2396	0.27	-1.1
2,417,430	-		GFF2396	0.27	+1.0
2,417,445	+		GFF2396	0.28	+2.0
2,417,445	+		GFF2396	0.28	+1.1
2,417,445	+		GFF2396	0.28	+0.4
2,417,445	+		GFF2396	0.28	+0.2
2,417,445	+		GFF2396	0.28	-1.5
2,417,445	+		GFF2396	0.28	+0.3
2,417,445	+		GFF2396	0.28	-0.5
2,417,445	+		GFF2396	0.28	-1.8
2,417,453	-		GFF2396	0.29	-0.0
2,417,453	-		GFF2396	0.29	+0.7
2,417,453	-		GFF2396	0.29	-1.2
2,417,453	-		GFF2396	0.29	-0.9
2,417,453	-		GFF2396	0.29	+0.4
2,417,453	-		GFF2396	0.29	-0.8
2,417,453	-		GFF2396	0.29	+0.2
2,417,453	-		GFF2396	0.29	+1.2
2,417,453	-		GFF2396	0.29	-1.1
2,417,453	-		GFF2396	0.29	+1.6
2,417,458	-		GFF2396	0.29	+0.3
2,417,464	+		GFF2396	0.30	-1.1
2,417,471	+		GFF2396	0.30	+1.2
2,417,475	+		GFF2396	0.30	+0.7
2,417,475	+		GFF2396	0.30	-1.5
2,417,475	+		GFF2396	0.30	+1.3
2,417,475	+		GFF2396	0.30	+0.3
2,417,475	+		GFF2396	0.30	-0.0
2,417,480	+		GFF2396	0.31	+0.7
2,417,483	-		GFF2396	0.31	+0.2
2,417,483	-		GFF2396	0.31	-1.6
2,417,488	-		GFF2396	0.31	-1.4
2,417,499	+		GFF2396	0.32	-1.7
2,417,509	+		GFF2396	0.33	-0.2
2,417,513	+		GFF2396	0.33	-0.3
2,417,518	+		GFF2396	0.33	+0.8
2,417,518	+		GFF2396	0.33	-2.0
2,417,518	+		GFF2396	0.33	-0.5
2,417,518	+		GFF2396	0.33	+1.1
2,417,518	+		GFF2396	0.33	-0.1
2,417,521	-		GFF2396	0.34	-1.5
2,417,521	-		GFF2396	0.34	-1.0
2,417,521	-		GFF2396	0.34	-2.2
2,417,526	-		GFF2396	0.34	-1.3
2,417,526	-		GFF2396	0.34	-0.5
2,417,530	+		GFF2396	0.34	-0.6
2,417,531	-		GFF2396	0.34	+0.2
2,417,531	-		GFF2396	0.34	-2.0
2,417,538	-		GFF2396	0.35	-0.1
2,417,538	-		GFF2396	0.35	+1.6
2,417,552	+		GFF2396	0.36	+0.0
2,417,589	+		GFF2396	0.38	+0.1
2,417,597	-		GFF2396	0.39	-0.0
2,417,601	-		GFF2396	0.39	-0.0
2,417,611	+		GFF2396	0.40	+1.2
2,417,614	-		GFF2396	0.40	+1.1
2,417,619	-		GFF2396	0.40	-0.4
2,417,619	-		GFF2396	0.40	-0.2
2,417,619	-		GFF2396	0.40	-0.7
2,417,622	-		GFF2396	0.40	+0.1
2,417,624	+		GFF2396	0.40	-1.4
2,417,625	+		GFF2396	0.40	+0.4
2,417,625	+		GFF2396	0.40	+0.1
2,417,625	+		GFF2396	0.40	+0.0
2,417,632	-		GFF2396	0.41	-0.8
2,417,634	-		GFF2396	0.41	-1.0
2,417,636	+		GFF2396	0.41	-1.9
2,417,641	+		GFF2396	0.42	-0.1
2,417,641	+		GFF2396	0.42	+1.0
2,417,641	+		GFF2396	0.42	+0.8
2,417,646	+		GFF2396	0.42	-0.3
2,417,649	-		GFF2396	0.42	+0.4
2,417,675	-		GFF2396	0.44	-1.7
2,417,688	+		GFF2396	0.45	-1.5
2,417,736	+		GFF2396	0.48	-1.6
2,417,736	+		GFF2396	0.48	+0.8
2,417,736	+		GFF2396	0.48	-1.9
2,417,736	+		GFF2396	0.48	+1.2
2,417,736	+		GFF2396	0.48	-0.2
2,417,736	+		GFF2396	0.48	+0.2
2,417,741	+		GFF2396	0.48	-1.8
2,417,741	+		GFF2396	0.48	+0.2
2,417,744	-		GFF2396	0.48	+0.3
2,417,744	-		GFF2396	0.48	-0.2
2,417,744	-		GFF2396	0.48	+0.3
2,417,744	-		GFF2396	0.48	+0.8
2,417,744	-		GFF2396	0.48	+0.8
2,417,745	+		GFF2396	0.48	-1.2
2,417,749	-		GFF2396	0.49	-0.8
2,417,749	-		GFF2396	0.49	+0.2
2,417,749	-		GFF2396	0.49	-1.1
2,417,750	+		GFF2396	0.49	-1.2
2,417,750	+		GFF2396	0.49	+0.1
2,417,755	+		GFF2396	0.49	+0.6
2,417,755	+		GFF2396	0.49	-1.7
2,417,755	+		GFF2396	0.49	-1.6
2,417,758	-		GFF2396	0.49	+1.4
2,417,758	-		GFF2396	0.49	+0.2
2,417,758	-		GFF2396	0.49	+0.0
2,417,758	-		GFF2396	0.49	+0.0
2,417,758	-		GFF2396	0.49	+0.7
2,417,763	-		GFF2396	0.50	+1.0
2,417,763	-		GFF2396	0.50	+0.6
2,417,763	-		GFF2396	0.50	+0.1
2,417,763	-		GFF2396	0.50	-1.4
2,417,763	-		GFF2396	0.50	-0.7
2,417,763	-		GFF2396	0.50	-2.6
2,417,763	-		GFF2396	0.50	-1.2
2,417,763	-		GFF2396	0.50	-1.2
2,417,765	+		GFF2396	0.50	-1.4
2,417,767	+		GFF2396	0.50	-1.9
2,417,773	-		GFF2396	0.50	-0.2
2,417,797	+		GFF2396	0.52	+0.6
2,417,797	+		GFF2396	0.52	+0.8
2,417,810	-		GFF2396	0.53	+0.3
2,417,825	-		GFF2396	0.54	+1.0
2,417,886	+		GFF2396	0.58	+0.7
2,417,918	+		GFF2396	0.60	+1.0
2,417,947	+		GFF2396	0.62	-0.1
2,417,952	+		GFF2396	0.62	+0.2
2,417,956	+		GFF2396	0.63	-1.0
2,417,960	-		GFF2396	0.63	+1.4
2,417,963	-		GFF2396	0.63	+0.1
2,417,974	-		GFF2396	0.64	-1.4
2,417,976	+		GFF2396	0.64	-1.8
2,417,976	+		GFF2396	0.64	-0.3
2,417,977	+		GFF2396	0.64	-0.5
2,417,982	+		GFF2396	0.64	+0.3
2,417,984	-		GFF2396	0.64	+0.0
2,418,003	+		GFF2396	0.66	-1.2
2,418,010	-		GFF2396	0.66	-1.2
2,418,013	+		GFF2396	0.66	-1.6
2,418,014	+		GFF2396	0.66	-0.6
2,418,014	+		GFF2396	0.66	+0.4
2,418,015	+		GFF2396	0.66	+0.6
2,418,015	+		GFF2396	0.66	-0.6
2,418,021	-		GFF2396	0.67	+0.1
2,418,022	-		GFF2396	0.67	+0.3
2,418,023	-		GFF2396	0.67	+0.6
2,418,023	-		GFF2396	0.67	+0.2
2,418,023	-		GFF2396	0.67	+0.7
2,418,024	+		GFF2396	0.67	+0.1
2,418,024	+		GFF2396	0.67	+1.5
2,418,024	+		GFF2396	0.67	-1.4
2,418,031	-		GFF2396	0.68	+0.5
2,418,032	-		GFF2396	0.68	+0.2
2,418,032	-		GFF2396	0.68	-0.5
2,418,054	+		GFF2396	0.69	-1.6
2,418,059	+		GFF2396	0.69	-0.5
2,418,064	+		GFF2396	0.70	+0.8
2,418,064	+		GFF2396	0.70	+0.4
2,418,067	-		GFF2396	0.70	-0.1
2,418,071	+		GFF2396	0.70	-0.6
2,418,072	-		GFF2396	0.70	-0.6
2,418,072	-		GFF2396	0.70	-0.4
2,418,072	-		GFF2396	0.70	-1.7
2,418,072	-		GFF2396	0.70	-1.7
2,418,072	-		GFF2396	0.70	-0.5
2,418,072	-		GFF2396	0.70	-1.6
2,418,072	-		GFF2396	0.70	+0.4
2,418,079	-		GFF2396	0.71	-0.6
2,418,079	-		GFF2396	0.71	+0.5
2,418,082	+		GFF2396	0.71	+0.7
2,418,093	+		GFF2396	0.72	+0.7
2,418,094	+		GFF2396	0.72	+1.1
2,418,094	+		GFF2396	0.72	-0.3
2,418,099	+		GFF2396	0.72	-1.0
2,418,099	+		GFF2396	0.72	+0.8
2,418,099	+		GFF2396	0.72	-0.5
2,418,099	+		GFF2396	0.72	-0.1
2,418,099	+		GFF2396	0.72	+0.5
2,418,099	+		GFF2396	0.72	-0.1
2,418,101	-		GFF2396	0.72	-0.9
2,418,102	-		GFF2396	0.72	+0.2
2,418,112	-		GFF2396	0.73	-0.3
2,418,114	+		GFF2396	0.73	-0.9
2,418,119	+		GFF2396	0.73	+0.6
2,418,122	-		GFF2396	0.74	-0.3
2,418,122	-		GFF2396	0.74	-1.0
2,418,124	+		GFF2396	0.74	+0.2
2,418,137	+		GFF2396	0.75	-0.7
2,418,137	+		GFF2396	0.75	+1.7
2,418,137	+		GFF2396	0.75	+0.6
2,418,144	+		GFF2396	0.75	-1.9
2,418,144	+		GFF2396	0.75	+1.0
2,418,144	+		GFF2396	0.75	-0.0
2,418,144	+		GFF2396	0.75	+0.4
2,418,144	+		GFF2396	0.75	-1.4
2,418,144	+		GFF2396	0.75	+0.3
2,418,145	-		GFF2396	0.75	-0.7
2,418,145	-		GFF2396	0.75	-0.5
2,418,149	+		GFF2396	0.75	-0.0
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