Strain Fitness in Sphingobium sp. HT1-2 around GFF1957

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,983,081	-				-1.0
1,983,094	-				-1.7
1,983,096	-				-0.7
1,983,096	-				+0.4
1,983,310	-		GFF1956	0.50	+0.4
1,983,371	-		GFF1956	0.62	-0.3
1,983,583	-				+0.8
1,983,583	-				+0.4
1,983,583	-				-0.9
1,983,583	-				+0.1
1,983,716	+				-0.9
1,983,759	+				-1.4
1,983,759	+				+1.1
1,983,767	-				-0.6
1,983,767	-				+0.1
1,983,823	+				+0.1
1,983,830	+				-0.1
1,983,831	-				-1.9
1,983,831	-				-1.1
1,983,835	+				+0.5
1,983,839	+				-0.5
1,983,839	+				-0.5
1,983,839	+				-2.1
1,983,845	+				-1.7
1,983,847	-				-0.5
1,983,847	-				-0.1
1,983,847	-				-2.1
1,983,847	-				-0.2
1,983,847	-				-0.9
1,983,849	+				-0.4
1,983,849	+				-0.2
1,983,857	-				-1.1
1,983,857	-				+0.3
1,983,882	-		GFF1957	0.11	-0.3
1,983,931	+		GFF1957	0.15	+0.8
1,983,952	+		GFF1957	0.17	-0.9
1,983,969	+		GFF1957	0.18	-2.1
1,983,982	+		GFF1957	0.20	-0.5
1,983,990	-		GFF1957	0.20	-0.8
1,984,013	-		GFF1957	0.22	+0.1
1,984,016	-		GFF1957	0.22	-0.5
1,984,025	+		GFF1957	0.23	-1.9
1,984,028	-		GFF1957	0.23	+0.8
1,984,030	+		GFF1957	0.23	+1.7
1,984,030	+		GFF1957	0.23	-1.0
1,984,030	+		GFF1957	0.23	-2.4
1,984,030	+		GFF1957	0.23	-1.2
1,984,030	+		GFF1957	0.23	+0.7
1,984,033	-		GFF1957	0.24	-0.8
1,984,033	-		GFF1957	0.24	+0.2
1,984,038	-		GFF1957	0.24	+1.3
1,984,038	-		GFF1957	0.24	-0.7
1,984,055	-		GFF1957	0.25	+1.5
1,984,084	+		GFF1957	0.28	+0.2
1,984,084	+		GFF1957	0.28	-0.1
1,984,084	+		GFF1957	0.28	+0.1
1,984,084	+		GFF1957	0.28	-0.5
1,984,087	-		GFF1957	0.28	-2.2
1,984,089	+		GFF1957	0.28	-0.2
1,984,089	+		GFF1957	0.28	-1.7
1,984,092	-		GFF1957	0.29	+0.2
1,984,097	-		GFF1957	0.29	-1.5
1,984,104	+		GFF1957	0.29	-1.3
1,984,110	+		GFF1957	0.30	-1.0
1,984,134	+		GFF1957	0.32	+0.8
1,984,168	+		GFF1957	0.35	-0.5
1,984,183	+		GFF1957	0.36	+0.6
1,984,185	+		GFF1957	0.36	-1.1
1,984,185	+		GFF1957	0.36	+0.0
1,984,190	+		GFF1957	0.37	-2.3
1,984,190	+		GFF1957	0.37	+0.5
1,984,191	-		GFF1957	0.37	-2.1
1,984,193	-		GFF1957	0.37	-0.3
1,984,193	-		GFF1957	0.37	+0.7
1,984,193	-		GFF1957	0.37	-1.5
1,984,193	-		GFF1957	0.37	-1.4
1,984,198	-		GFF1957	0.37	-2.0
1,984,198	-		GFF1957	0.37	-0.7
1,984,200	+		GFF1957	0.37	+0.5
1,984,208	-		GFF1957	0.38	-0.3
1,984,218	+		GFF1957	0.39	-0.1
1,984,225	+		GFF1957	0.39	+0.6
1,984,280	+		GFF1957	0.44	+0.4
1,984,288	-		GFF1957	0.45	-0.6
1,984,293	+		GFF1957	0.45	+1.4
1,984,298	-		GFF1957	0.45	+0.0
1,984,301	-		GFF1957	0.46	-1.5
1,984,331	+		GFF1957	0.48	-1.3
1,984,338	+		GFF1957	0.49	-0.2
1,984,346	-		GFF1957	0.49	-0.1
1,984,365	+		GFF1957	0.51	+0.4
1,984,370	+		GFF1957	0.51	-1.5
1,984,370	+		GFF1957	0.51	+0.7
1,984,370	+		GFF1957	0.51	+0.3
1,984,373	-		GFF1957	0.51	-0.5
1,984,373	-		GFF1957	0.51	+1.1
1,984,373	-		GFF1957	0.51	+0.4
1,984,373	-		GFF1957	0.51	-1.1
1,984,373	-		GFF1957	0.51	-0.7
1,984,378	-		GFF1957	0.52	-0.7
1,984,395	-		GFF1957	0.53	+0.0
1,984,396	+		GFF1957	0.53	-1.5
1,984,400	+		GFF1957	0.54	-0.0
1,984,413	-		GFF1957	0.55	-0.2
1,984,415	-		GFF1957	0.55	-0.7
1,984,438	+		GFF1957	0.57	+0.3
1,984,438	+		GFF1957	0.57	-2.0
1,984,446	-		GFF1957	0.57	+0.3
1,984,446	-		GFF1957	0.57	-1.3
1,984,459	-		GFF1957	0.58	-1.3
1,984,480	+		GFF1957	0.60	-0.3
1,984,482	-		GFF1957	0.60	-0.3
1,984,485	+		GFF1957	0.61	+0.4
1,984,491	+		GFF1957	0.61	-0.3
1,984,491	+		GFF1957	0.61	+0.6
1,984,491	+		GFF1957	0.61	-0.7
1,984,493	-		GFF1957	0.61	-0.9
1,984,499	-		GFF1957	0.62	-1.1
1,984,499	-		GFF1957	0.62	-0.8
1,984,499	-		GFF1957	0.62	-0.3
1,984,499	-		GFF1957	0.62	-2.2
1,984,499	-		GFF1957	0.62	+0.2
1,984,501	+		GFF1957	0.62	-0.7
1,984,501	+		GFF1957	0.62	-0.3
1,984,503	+		GFF1957	0.62	-0.7
1,984,503	+		GFF1957	0.62	-0.9
1,984,503	+		GFF1957	0.62	-1.2
1,984,511	-		GFF1957	0.63	+0.1
1,984,511	-		GFF1957	0.63	+1.5
1,984,511	-		GFF1957	0.63	-0.9
1,984,511	-		GFF1957	0.63	+1.2
1,984,537	+		GFF1957	0.65	-0.7
1,984,547	+		GFF1957	0.66	-0.7
1,984,571	+		GFF1957	0.68	+1.4
1,984,576	+		GFF1957	0.68	-1.3
1,984,581	+		GFF1957	0.68	-1.3
1,984,607	-		GFF1957	0.71	+1.3
1,984,617	-		GFF1957	0.71	-1.8
1,984,643	+		GFF1957	0.74	-0.7
1,984,651	-		GFF1957	0.74	-2.5
1,984,651	-		GFF1957	0.74	-0.2
1,984,651	-		GFF1957	0.74	+0.6
1,984,651	-		GFF1957	0.74	-1.5
1,984,661	-		GFF1957	0.75	+0.3
1,984,662	+		GFF1957	0.75	-0.3
1,984,696	-		GFF1957	0.78	-0.6
1,984,729	+		GFF1957	0.81	-0.1
1,984,729	+		GFF1957	0.81	-0.7
1,984,734	+		GFF1957	0.81	-2.8
1,984,737	-		GFF1957	0.81	+1.8
1,984,739	-		GFF1957	0.81	+0.0
1,984,742	-		GFF1957	0.82	+1.7
1,984,742	-		GFF1957	0.82	-1.2
1,984,742	-		GFF1957	0.82	-1.3
1,984,744	+		GFF1957	0.82	-1.5
1,984,747	-		GFF1957	0.82	-0.6
1,984,747	-		GFF1957	0.82	-0.3
1,984,747	-		GFF1957	0.82	-1.5
1,984,758	-		GFF1957	0.83	-0.7
1,984,760	+		GFF1957	0.83	-0.6
1,984,760	+		GFF1957	0.83	+0.4
1,984,760	+		GFF1957	0.83	-0.7
1,984,760	+		GFF1957	0.83	-2.3
1,984,760	+		GFF1957	0.83	-1.5
1,984,763	-		GFF1957	0.83	+0.4
1,984,765	+		GFF1957	0.83	+0.4
1,984,768	-		GFF1957	0.84	-0.1
1,984,768	-		GFF1957	0.84	+0.2
1,984,768	-		GFF1957	0.84	+0.9
1,984,768	-		GFF1957	0.84	-1.5
1,984,768	-		GFF1957	0.84	-0.2
1,984,768	-		GFF1957	0.84	+0.3
1,984,768	-		GFF1957	0.84	-0.0
1,984,773	-		GFF1957	0.84	+1.3
1,984,773	-		GFF1957	0.84	-1.5
1,984,773	-		GFF1957	0.84	-0.6
1,984,773	-		GFF1957	0.84	+0.6
1,984,773	-		GFF1957	0.84	-0.2
1,984,773	-		GFF1957	0.84	-0.5
1,984,804	+		GFF1957	0.87	-0.1
1,984,824	+		GFF1957	0.88	+0.0
1,984,832	-		GFF1957	0.89	+0.7
1,984,832	-		GFF1957	0.89	+0.1
1,984,832	-		GFF1957	0.89	-0.6
1,984,834	-		GFF1957	0.89	-0.3
1,984,837	-		GFF1957	0.89	+0.1
1,984,852	-				-0.8
1,984,853	+				+0.9
1,984,853	+				-0.9
1,984,853	+				+0.4
1,984,861	-				+1.1
1,984,911	-				-0.6
1,984,919	+				-2.4
1,984,919	+				-0.8
1,984,925	-				-0.3
1,984,929	-				-0.3
1,984,969	+				-0.7
1,985,223	-		GFF1958	0.79	-1.7
1,985,223	-		GFF1958	0.79	-1.2
1,985,234	+		GFF1958	0.82	-1.8
1,985,286	+				-2.0
1,985,286	+				-1.8
1,985,286	+				-0.3
1,985,294	-				+0.3
1,985,311	-				-1.8
1,985,312	+				-0.3
1,985,312	+				-1.6
1,985,354	-				-0.3
1,985,354	-				-1.3
1,985,360	+				+0.7
1,985,367	-				+0.1
1,985,416	+				-1.7