Strain Fitness in Sphingobium sp. HT1-2 around GFF1182

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,186,686	+		GFF1181	0.62	+1.1
1,186,686	+		GFF1181	0.62	+1.2
1,186,686	+		GFF1181	0.62	-0.0
1,186,686	+		GFF1181	0.62	+0.1
1,186,686	+		GFF1181	0.62	+0.0
1,186,688	-		GFF1181	0.62	-0.9
1,186,694	-		GFF1181	0.62	-0.3
1,186,694	-		GFF1181	0.62	+2.0
1,186,694	-		GFF1181	0.62	-0.1
1,186,694	-		GFF1181	0.62	-2.8
1,186,694	-		GFF1181	0.62	+1.0
1,186,694	-		GFF1181	0.62	-1.1
1,186,743	+		GFF1181	0.64	-0.9
1,186,746	-		GFF1181	0.64	-0.1
1,186,756	-		GFF1181	0.65	-0.7
1,186,761	-		GFF1181	0.65	-0.4
1,186,767	+		GFF1181	0.65	-1.2
1,186,772	+		GFF1181	0.65	-0.0
1,186,772	+		GFF1181	0.65	+0.0
1,186,772	+		GFF1181	0.65	-2.0
1,186,772	+		GFF1181	0.65	-0.6
1,186,775	-		GFF1181	0.65	-2.8
1,186,775	-		GFF1181	0.65	-1.0
1,186,777	+		GFF1181	0.65	-0.9
1,186,780	-		GFF1181	0.66	-0.7
1,186,780	-		GFF1181	0.66	+0.5
1,186,780	-		GFF1181	0.66	-0.0
1,186,780	-		GFF1181	0.66	+0.7
1,186,780	-		GFF1181	0.66	+0.4
1,186,785	-		GFF1181	0.66	-1.6
1,186,785	-		GFF1181	0.66	-0.5
1,186,799	+		GFF1181	0.66	-1.2
1,186,818	-		GFF1181	0.67	-0.2
1,186,819	+		GFF1181	0.67	-0.1
1,186,819	+		GFF1181	0.67	+0.6
1,186,819	+		GFF1181	0.67	+0.5
1,186,819	+		GFF1181	0.67	+1.8
1,186,819	+		GFF1181	0.67	-0.1
1,186,819	+		GFF1181	0.67	-0.3
1,186,819	+		GFF1181	0.67	+0.9
1,186,819	+		GFF1181	0.67	-0.6
1,186,819	+		GFF1181	0.67	-0.2
1,186,819	+		GFF1181	0.67	-0.8
1,186,819	+		GFF1181	0.67	-0.6
1,186,819	+		GFF1181	0.67	-0.2
1,186,819	+		GFF1181	0.67	-1.2
1,186,819	+		GFF1181	0.67	+0.5
1,186,819	+		GFF1181	0.67	-0.5
1,186,819	+		GFF1181	0.67	+0.1
1,186,819	+		GFF1181	0.67	+0.8
1,186,819	+		GFF1181	0.67	-0.9
1,186,819	+		GFF1181	0.67	-0.3
1,186,819	+		GFF1181	0.67	+0.0
1,186,827	-		GFF1181	0.67	+1.1
1,186,827	-		GFF1181	0.67	+0.4
1,186,827	-		GFF1181	0.67	+0.0
1,186,827	-		GFF1181	0.67	+1.3
1,186,827	-		GFF1181	0.67	+1.0
1,186,827	-		GFF1181	0.67	-1.3
1,186,827	-		GFF1181	0.67	-1.1
1,186,827	-		GFF1181	0.67	+0.3
1,186,827	-		GFF1181	0.67	-2.4
1,186,827	-		GFF1181	0.67	+0.6
1,186,827	-		GFF1181	0.67	+0.6
1,186,827	-		GFF1181	0.67	+1.5
1,186,827	-		GFF1181	0.67	+0.3
1,186,827	-		GFF1181	0.67	-1.5
1,186,827	-		GFF1181	0.67	-1.6
1,186,827	-		GFF1181	0.67	+0.5
1,186,827	-		GFF1181	0.67	-2.1
1,186,827	-		GFF1181	0.67	-0.5
1,186,827	-		GFF1181	0.67	+1.0
1,186,827	-		GFF1181	0.67	+1.2
1,186,827	-		GFF1181	0.67	+0.1
1,186,827	-		GFF1181	0.67	-0.2
1,186,827	-		GFF1181	0.67	-0.4
1,186,829	+		GFF1181	0.67	+0.5
1,186,834	+		GFF1181	0.68	-0.5
1,186,873	-		GFF1181	0.69	+0.2
1,186,878	-		GFF1181	0.69	-1.2
1,186,889	+		GFF1181	0.70	-0.0
1,186,889	+		GFF1181	0.70	-0.3
1,186,889	+		GFF1181	0.70	-1.4
1,186,889	+		GFF1181	0.70	-0.5
1,186,889	+		GFF1181	0.70	-0.8
1,186,889	+		GFF1181	0.70	+0.0
1,186,889	+		GFF1181	0.70	+0.7
1,186,889	+		GFF1181	0.70	-0.7
1,186,892	-		GFF1181	0.70	-0.5
1,186,897	-		GFF1181	0.70	-0.6
1,186,897	-		GFF1181	0.70	-1.1
1,186,897	-		GFF1181	0.70	-0.2
1,186,897	-		GFF1181	0.70	+0.1
1,186,897	-		GFF1181	0.70	-0.8
1,186,897	-		GFF1181	0.70	-0.3
1,186,897	-		GFF1181	0.70	+1.1
1,186,897	-		GFF1181	0.70	-0.3
1,186,897	-		GFF1181	0.70	+1.1
1,186,897	-		GFF1181	0.70	-2.6
1,186,907	-		GFF1181	0.70	-1.5
1,186,909	+		GFF1181	0.71	+0.2
1,186,909	+		GFF1181	0.71	-0.8
1,186,909	+		GFF1181	0.71	+1.1
1,186,909	+		GFF1181	0.71	+0.3
1,186,909	+		GFF1181	0.71	-1.6
1,186,909	+		GFF1181	0.71	-1.5
1,186,909	+		GFF1181	0.71	-1.1
1,186,909	+		GFF1181	0.71	+0.3
1,186,910	-		GFF1181	0.71	-1.1
1,186,917	-		GFF1181	0.71	-2.4
1,186,917	-		GFF1181	0.71	+0.3
1,186,917	-		GFF1181	0.71	-0.0
1,186,917	-		GFF1181	0.71	-2.2
1,186,917	-		GFF1181	0.71	+0.1
1,186,917	-		GFF1181	0.71	+0.1
1,186,917	-		GFF1181	0.71	-0.4
1,186,917	-		GFF1181	0.71	-1.4
1,186,917	-		GFF1181	0.71	+0.5
1,186,917	-		GFF1181	0.71	+0.1
1,186,917	-		GFF1181	0.71	+1.6
1,186,917	-		GFF1181	0.71	-0.5
1,186,917	-		GFF1181	0.71	-0.7
1,186,917	-		GFF1181	0.71	-0.3
1,186,917	-		GFF1181	0.71	-0.1
1,186,917	-		GFF1181	0.71	+0.9
1,186,918	-		GFF1181	0.71	+0.9
1,186,928	-		GFF1181	0.71	-0.6
1,186,952	+		GFF1181	0.72	-0.7
1,186,955	+		GFF1181	0.72	+0.8
1,186,973	+		GFF1181	0.73	+0.5
1,186,973	+		GFF1181	0.73	-0.2
1,186,973	+		GFF1181	0.73	-0.5
1,186,973	+		GFF1181	0.73	+0.9
1,186,976	-		GFF1181	0.73	-0.5
1,186,978	+		GFF1181	0.73	-0.2
1,186,981	-		GFF1181	0.73	-2.5
1,186,983	+		GFF1181	0.73	+0.0
1,186,983	+		GFF1181	0.73	+0.4
1,186,983	+		GFF1181	0.73	+0.5
1,186,991	-		GFF1181	0.74	-0.5
1,186,991	-		GFF1181	0.74	-0.8
1,186,991	-		GFF1181	0.74	+1.8
1,187,003	-		GFF1181	0.74	+0.3
1,187,006	+		GFF1181	0.74	+0.2
1,187,014	+		GFF1181	0.75	-1.8
1,187,025	+		GFF1181	0.75	+0.3
1,187,062	+		GFF1181	0.76	-1.4
1,187,062	+		GFF1181	0.76	-0.9
1,187,063	+		GFF1181	0.76	-0.4
1,187,071	-		GFF1181	0.77	-0.5
1,187,100	+		GFF1181	0.78	-0.9
1,187,110	+		GFF1181	0.78	-0.3
1,187,118	-		GFF1181	0.79	-0.2
1,187,118	-		GFF1181	0.79	-0.8
1,187,118	-		GFF1181	0.79	+0.4
1,187,125	+		GFF1181	0.79	-0.1
1,187,135	+		GFF1181	0.79	-0.6
1,187,136	+		GFF1181	0.79	-0.4
1,187,142	-		GFF1181	0.79	-1.7
1,187,144	-		GFF1181	0.80	-1.2
1,187,153	+		GFF1181	0.80	+0.4
1,187,175	+		GFF1181	0.81	+0.8
1,187,177	+		GFF1181	0.81	-1.9
1,187,184	-		GFF1181	0.81	+0.0
1,187,194	+		GFF1181	0.81	-0.5
1,187,194	+		GFF1181	0.81	-1.0
1,187,199	+		GFF1181	0.82	+0.6
1,187,202	-		GFF1181	0.82	-1.1
1,187,208	-		GFF1181	0.82	-0.5
1,187,209	+		GFF1181	0.82	-0.2
1,187,209	+		GFF1181	0.82	-0.5
1,187,209	+		GFF1181	0.82	-1.6
1,187,210	+		GFF1181	0.82	+0.2
1,187,217	-		GFF1181	0.82	-2.2
1,187,218	-		GFF1181	0.82	-2.8
1,187,228	+		GFF1181	0.83	+0.3
1,187,280	+		GFF1181	0.85	-0.6
1,187,288	-		GFF1181	0.85	-0.4
1,187,311	+		GFF1181	0.86	-0.1
1,187,330	-		GFF1181	0.87	-0.5
1,187,336	-		GFF1181	0.87	-0.2
1,187,377	-		GFF1181	0.88	+0.2
1,187,389	+		GFF1181	0.89	+0.7
1,187,389	+		GFF1181	0.89	-0.0
1,187,399	+		GFF1181	0.89	-2.2
1,187,399	+		GFF1181	0.89	+0.6
1,187,399	+		GFF1181	0.89	-1.0
1,187,399	+		GFF1181	0.89	-1.2
1,187,399	+		GFF1181	0.89	+0.2
1,187,399	+		GFF1181	0.89	-0.5
1,187,399	+		GFF1181	0.89	-0.5
1,187,399	+		GFF1181	0.89	-0.9
1,187,399	+		GFF1181	0.89	-1.0
1,187,399	+		GFF1181	0.89	-2.0
1,187,407	-		GFF1181	0.90	+0.4
1,187,407	-		GFF1181	0.90	+0.1
1,187,407	-		GFF1181	0.90	-1.7
1,187,407	-		GFF1181	0.90	-0.4
1,187,407	-		GFF1181	0.90	+0.8
1,187,407	-		GFF1181	0.90	-1.7
1,187,407	-		GFF1181	0.90	+1.6
1,187,407	-		GFF1181	0.90	+1.0
1,187,407	-		GFF1181	0.90	-0.0
1,187,407	-		GFF1181	0.90	-0.2
1,187,459	+				-1.4
1,187,459	+				-0.7
1,187,467	-				+0.2
1,187,467	-				-0.5
1,187,469	+				-0.2
1,187,507	+				-1.0
1,187,508	+				-0.5
1,187,512	+				-1.7
1,187,516	-				-1.4
1,187,520	-				-0.9
1,187,528	-				+0.4
1,187,538	-				+0.3
1,187,539	+				-0.4
1,187,544	+				-0.2
1,187,544	+				-0.7
1,187,544	+				+1.0
1,187,547	-				-1.4
1,187,552	-				+0.1
1,187,552	-				-0.6
1,187,574	+				-1.0
1,187,582	-				-0.8
1,187,609	+				+0.6
1,187,636	-				-1.0
1,187,641	-				-0.1
1,187,648	+				-0.7
1,187,657	-				-0.2
1,187,678	+				+0.5
1,187,698	+				+1.0
1,187,698	+				-0.9
1,187,705	+				-0.5
1,187,706	-				-0.3
1,187,706	-				-1.2
1,187,706	-				-1.4
1,187,713	-				+1.1
1,187,732	-		GFF1182	0.15	-1.0
1,187,742	+		GFF1182	0.18	-1.0
1,187,749	-		GFF1182	0.20	-0.3
1,187,750	-		GFF1182	0.20	-1.0
1,187,750	-		GFF1182	0.20	+0.7
1,187,750	-		GFF1182	0.20	-1.0
1,187,750	-		GFF1182	0.20	-0.6
1,187,754	+		GFF1182	0.21	+0.9
1,187,755	-		GFF1182	0.21	-0.5
1,187,756	-		GFF1182	0.21	+0.2
1,187,773	+		GFF1182	0.26	-0.5
1,187,773	+		GFF1182	0.26	+0.9
1,187,773	+		GFF1182	0.26	-1.6
1,187,773	+		GFF1182	0.26	+1.2
1,187,773	+		GFF1182	0.26	-0.7
1,187,773	+		GFF1182	0.26	+0.5
1,187,775	+		GFF1182	0.27	+0.6
1,187,781	-		GFF1182	0.28	-0.5
1,187,781	-		GFF1182	0.28	-1.0
1,187,781	-		GFF1182	0.28	+0.2
1,187,782	-		GFF1182	0.28	-0.6
1,187,783	-		GFF1182	0.29	-1.3
1,187,793	-		GFF1182	0.31	+1.1
1,187,793	-		GFF1182	0.31	-1.1
1,187,801	+		GFF1182	0.34	-1.5
1,187,823	-		GFF1182	0.40	-0.7
1,187,836	+		GFF1182	0.43	-0.2
1,187,836	+		GFF1182	0.43	+0.3
1,187,836	+		GFF1182	0.43	+0.1
1,187,836	+		GFF1182	0.43	+0.0
1,187,844	-		GFF1182	0.45	+0.8
1,187,844	-		GFF1182	0.45	+0.7
1,187,844	-		GFF1182	0.45	-0.0
1,187,861	-		GFF1182	0.50	-0.9
1,187,869	-		GFF1182	0.52	-0.4
1,187,869	-		GFF1182	0.52	-1.3
1,187,874	+		GFF1182	0.53	-1.2
1,187,874	+		GFF1182	0.53	-0.3
1,187,894	+		GFF1182	0.59	-1.8
1,187,899	+		GFF1182	0.60	+0.1
1,187,902	-		GFF1182	0.61	+0.4
1,187,902	-		GFF1182	0.61	-2.1
1,187,902	-		GFF1182	0.61	+0.4
1,187,906	+		GFF1182	0.62	+1.2
1,187,911	+		GFF1182	0.63	-0.0
1,187,914	-		GFF1182	0.64	+0.5
1,187,914	-		GFF1182	0.64	-1.8
1,187,915	+		GFF1182	0.64	-0.5
1,187,927	+		GFF1182	0.68	+0.1
1,187,967	-		GFF1182	0.79	+0.4
1,187,969	-		GFF1182	0.79	+0.3
1,187,969	-		GFF1182	0.79	-0.3
1,187,971	-		GFF1182	0.80	-1.7
1,187,976	-		GFF1182	0.81	+0.2
1,187,992	+		GFF1182	0.85	-2.1
1,187,992	-		GFF1182	0.85	-1.2
1,187,992	-		GFF1182	0.85	-0.1
1,188,000	-		GFF1182	0.88	-2.4
1,188,002	+		GFF1182	0.88	+0.0
1,188,020	+				+0.3
1,188,034	+				-2.5
1,188,052	+				-0.4
1,188,059	-				-1.7
1,188,063	+				-0.3
1,188,089	-				+1.1
1,188,097	-				-0.1
1,188,097	-				-1.2
1,188,119	+				-0.4
1,188,134	+				-0.3
1,188,141	-				-0.0
1,188,161	-				-0.0
1,188,162	+				-1.5
1,188,165	+				-0.6
1,188,173	-				-1.0
1,188,178	+				-1.5
1,188,185	+				+0.0
1,188,199	+				-1.1
1,188,216	+				+0.3
1,188,220	-				+0.7
1,188,223	-				+0.6
1,188,224	-				+0.3
1,188,243	-				-0.9
1,188,249	+				-1.8
1,188,251	+				-2.1
1,188,251	+				+0.4
1,188,259	-				-0.2
1,188,272	-				+0.3
1,188,277	-				+0.3
1,188,282	-				-1.0
1,188,282	-				-0.1
1,188,285	+				-0.4
1,188,288	-				-1.1
1,188,306	-		GFF1183	0.11	+0.5
1,188,312	+		GFF1183	0.11	+0.8
1,188,322	+		GFF1183	0.11	-0.7
1,188,330	-		GFF1183	0.11	-0.2
1,188,331	+		GFF1183	0.11	-0.9
1,188,336	-		GFF1183	0.12	-1.0
1,188,344	-		GFF1183	0.12	+0.5
1,188,344	-		GFF1183	0.12	-1.5
1,188,349	-		GFF1183	0.12	-0.1
1,188,354	+		GFF1183	0.12	-1.8
1,188,354	+		GFF1183	0.12	-0.5
1,188,362	-		GFF1183	0.13	-0.9
1,188,362	-		GFF1183	0.13	-1.4
1,188,367	-		GFF1183	0.13	+0.5
1,188,394	-		GFF1183	0.14	-1.5
1,188,411	-		GFF1183	0.15	-1.5
1,188,439	+		GFF1183	0.16	+1.0
1,188,454	-		GFF1183	0.16	+0.7
1,188,477	+		GFF1183	0.17	+0.2
1,188,477	+		GFF1183	0.17	-0.8
1,188,477	-		GFF1183	0.17	+0.2
1,188,477	-		GFF1183	0.17	+0.1
1,188,503	-		GFF1183	0.18	-0.8
1,188,521	+		GFF1183	0.19	+0.2
1,188,521	+		GFF1183	0.19	-0.3
1,188,521	+		GFF1183	0.19	-0.1
1,188,532	+		GFF1183	0.19	-0.4
1,188,532	+		GFF1183	0.19	+1.8
1,188,536	+		GFF1183	0.20	-1.7
1,188,540	-		GFF1183	0.20	-0.4
1,188,540	-		GFF1183	0.20	-0.6
1,188,567	+		GFF1183	0.21	+0.5
1,188,569	+		GFF1183	0.21	+1.1
1,188,571	+		GFF1183	0.21	+0.4
1,188,576	+		GFF1183	0.21	-0.7
1,188,576	+		GFF1183	0.21	+0.6
1,188,576	+		GFF1183	0.21	+0.3
1,188,576	+		GFF1183	0.21	-1.9
1,188,576	+		GFF1183	0.21	+0.0
1,188,576	+		GFF1183	0.21	-0.3
1,188,576	+		GFF1183	0.21	+0.8
1,188,576	+		GFF1183	0.21	+0.3
1,188,576	+		GFF1183	0.21	-0.3
1,188,576	+		GFF1183	0.21	+0.4
1,188,576	+		GFF1183	0.21	-1.7
1,188,577	-		GFF1183	0.21	+0.9
1,188,578	+		GFF1183	0.21	-0.8
1,188,581	+		GFF1183	0.21	-0.6
1,188,584	-		GFF1183	0.22	+0.5
1,188,584	-		GFF1183	0.22	-0.2
1,188,584	-		GFF1183	0.22	-0.4
1,188,584	-		GFF1183	0.22	+0.4
1,188,584	-		GFF1183	0.22	-2.6
1,188,584	-		GFF1183	0.22	+1.2
1,188,584	-		GFF1183	0.22	-0.2
1,188,584	-		GFF1183	0.22	-0.5
1,188,584	-		GFF1183	0.22	+0.7
1,188,584	-		GFF1183	0.22	-0.7
1,188,584	-		GFF1183	0.22	-0.9
1,188,584	-		GFF1183	0.22	+0.3
1,188,586	-		GFF1183	0.22	-0.5
1,188,612	+		GFF1183	0.23	-0.3
1,188,612	+		GFF1183	0.23	+0.1
1,188,612	+		GFF1183	0.23	-3.3
1,188,612	+		GFF1183	0.23	+0.5
1,188,612	+		GFF1183	0.23	-1.0
1,188,612	+		GFF1183	0.23	-2.2
1,188,612	+		GFF1183	0.23	+1.1
1,188,612	+		GFF1183	0.23	+1.7
1,188,612	+		GFF1183	0.23	-1.1
1,188,620	-		GFF1183	0.23	-0.4
1,188,620	-		GFF1183	0.23	-1.3
1,188,620	-		GFF1183	0.23	-0.1
1,188,650	-		GFF1183	0.24	-0.4
1,188,713	+		GFF1183	0.27	-0.7
1,188,758	+		GFF1183	0.28	+0.2
1,188,760	+		GFF1183	0.29	-0.1
1,188,760	+		GFF1183	0.29	+1.0
1,188,760	+		GFF1183	0.29	-0.7
1,188,760	+		GFF1183	0.29	-2.7
1,188,760	+		GFF1183	0.29	+0.8
1,188,760	+		GFF1183	0.29	+1.6
1,188,766	+		GFF1183	0.29	-1.5
1,188,766	+		GFF1183	0.29	+0.5
1,188,768	-		GFF1183	0.29	-1.4
1,188,768	-		GFF1183	0.29	-0.3
1,188,768	-		GFF1183	0.29	-1.1
1,188,768	-		GFF1183	0.29	-1.5
1,188,768	-		GFF1183	0.29	-0.1
1,188,774	-		GFF1183	0.29	-1.0
1,188,774	-		GFF1183	0.29	-0.4
1,188,774	-		GFF1183	0.29	-1.8
1,188,779	+		GFF1183	0.29	+0.3
1,188,797	+		GFF1183	0.30	+0.3
1,188,797	+		GFF1183	0.30	-2.3
1,188,799	+		GFF1183	0.30	-0.4
1,188,807	-		GFF1183	0.30	-1.2
1,188,863	-		GFF1183	0.33	-0.9
1,188,876	-		GFF1183	0.33	-1.2
1,188,877	+		GFF1183	0.33	+0.0
1,188,889	+		GFF1183	0.34	-1.9
1,188,889	+		GFF1183	0.34	+0.5
1,188,897	-		GFF1183	0.34	-0.4
1,188,897	-		GFF1183	0.34	+0.8
1,188,897	-		GFF1183	0.34	-0.6
1,188,899	+		GFF1183	0.34	+0.4
1,188,907	-		GFF1183	0.34	-0.6
1,188,909	-		GFF1183	0.34	+0.5
1,188,928	+		GFF1183	0.35	-1.2
1,188,928	+		GFF1183	0.35	+0.6
1,188,933	+		GFF1183	0.35	-0.5
1,188,933	+		GFF1183	0.35	+0.1
1,188,936	-		GFF1183	0.36	-2.0
1,188,941	+		GFF1183	0.36	+0.2
1,188,949	-		GFF1183	0.36	+1.2
1,188,968	-		GFF1183	0.37	+1.3
1,188,982	+		GFF1183	0.37	-2.0
1,188,995	-		GFF1183	0.38	-0.3
1,189,029	+		GFF1183	0.39	+0.3
1,189,030	-		GFF1183	0.39	+0.2
1,189,030	-		GFF1183	0.39	-0.7
1,189,031	-		GFF1183	0.39	+0.9
1,189,031	-		GFF1183	0.39	+0.3