Strain Fitness in Sphingobium sp. HT1-2 around GFF4526

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,514,494	+				-1.3
4,514,510	+				+0.2
4,514,530	+				+0.4
4,514,530	+				-2.3
4,514,538	-				-2.0
4,514,539	-				-0.7
4,514,956	+				-1.3
4,514,959	+				+0.1
4,514,964	+				+0.4
4,514,979	+				-0.8
4,515,046	-				+0.4
4,515,055	-				-0.1
4,515,111	+				-0.0
4,515,164	-				+0.4
4,515,449	+				-0.5
4,515,495	-				-1.8
4,515,532	+				-2.2
4,515,540	-				-0.0
4,515,544	+				-1.2
4,515,581	+		GFF4526	0.14	-2.0
4,515,594	+		GFF4526	0.16	-0.5
4,515,607	+		GFF4526	0.18	+0.1
4,515,615	-		GFF4526	0.19	-1.8
4,515,630	+		GFF4526	0.22	+0.2
4,515,638	-		GFF4526	0.23	-0.4
4,515,750	-		GFF4526	0.41	+0.5
4,515,799	+		GFF4526	0.48	-1.8
4,515,804	+		GFF4526	0.49	-0.1
4,515,804	+		GFF4526	0.49	-0.3
4,515,804	+		GFF4526	0.49	-1.7
4,515,804	+		GFF4526	0.49	+0.8
4,515,805	-		GFF4526	0.49	-1.1
4,515,807	-		GFF4526	0.50	+0.5
4,515,812	-		GFF4526	0.50	+0.8
4,515,812	-		GFF4526	0.50	-1.4
4,515,812	-		GFF4526	0.50	-0.1
4,515,827	+		GFF4526	0.53	-0.7
4,515,827	-		GFF4526	0.53	-0.3
4,515,931	+		GFF4526	0.69	-2.6
4,515,955	+		GFF4526	0.73	-1.4
4,516,017	+		GFF4526	0.83	+1.1
4,516,047	+		GFF4526	0.88	-0.1
4,516,069	-				-0.9
4,516,113	-				-0.6
4,516,130	+				+0.3
4,516,130	+				+0.6
4,516,130	+				-0.7
4,516,130	+				-2.1
4,516,130	+				-0.8
4,516,130	+				-0.0
4,516,130	+				-0.1
4,516,130	+				-1.0
4,516,130	+				-2.7
4,516,130	+				+0.3
4,516,130	+				-0.1
4,516,130	+				-0.4
4,516,130	+				-0.0
4,516,130	+				-2.0
4,516,130	+				+0.2
4,516,130	+				+0.3
4,516,130	+				+0.7
4,516,130	+				+1.3
4,516,130	+				-1.2
4,516,138	-				-1.0
4,516,138	-				-0.3
4,516,138	-				+0.4
4,516,138	-				-0.3
4,516,138	-				-0.6
4,516,138	-				-0.3
4,516,138	-				-0.7
4,516,138	-				-1.0
4,516,138	-				+0.1
4,516,138	-				-0.7
4,516,138	-				-0.5
4,516,138	-				-0.5
4,516,143	-				-1.2
4,516,147	+				-0.4
4,516,147	+				-0.2
4,516,147	+				+0.3
4,516,147	+				+0.6
4,516,147	+				-1.8
4,516,147	+				-0.4
4,516,147	+				+0.3
4,516,147	+				-1.0
4,516,147	+				-0.3
4,516,155	+				-0.7
4,516,155	+				-3.2
4,516,155	-				-0.6
4,516,155	-				-1.0
4,516,155	-				-0.0
4,516,155	-				-0.4
4,516,155	-				+0.0
4,516,155	-				+0.6
4,516,155	-				+0.8
4,516,155	-				-0.2
4,516,155	-				-1.5
4,516,155	-				-0.3
4,516,155	-				+0.6
4,516,155	-				-0.5
4,516,155	-				-1.0
4,516,155	-				-1.0
4,516,155	-				-1.9
4,516,155	-				-1.1
4,516,155	-				-1.7
4,516,155	-				+0.4
4,516,178	+				-1.1
4,516,178	+				+2.3
4,516,178	+				-1.2
4,516,178	+				-0.7
4,516,186	-				-0.0
4,516,186	-				-1.5
4,516,186	-				+0.7
4,516,192	+				-0.8
4,516,197	+				-0.6
4,516,209	+				+0.6
4,516,212	-				-1.0
4,516,217	-				+0.4
4,516,217	-				-0.7
4,516,226	+				+0.5
4,516,227	-				-1.1
4,516,238	+				-1.3
4,516,243	+				+0.0
4,516,243	+				+1.1
4,516,243	+				-1.5
4,516,243	+				-0.0
4,516,243	+				+0.1
4,516,243	+				-1.3
4,516,243	+				-0.1
4,516,243	+				-1.5
4,516,243	+				-1.0
4,516,243	+				-2.2
4,516,243	+				-0.1
4,516,243	+				-0.6
4,516,243	+				-0.7
4,516,243	+				-0.5
4,516,243	+				-0.3
4,516,243	+				-0.8
4,516,243	+				+1.1
4,516,243	+				-0.6
4,516,243	+				-0.8
4,516,243	+				-0.3
4,516,243	+				+1.1
4,516,243	+				-2.7
4,516,243	+				-0.4
4,516,249	+				-0.2
4,516,251	-				+0.3
4,516,251	-				-0.2
4,516,251	-				-2.2
4,516,251	-				+1.4
4,516,251	-				-1.5
4,516,251	-				-0.7
4,516,251	-				+0.6
4,516,251	-				-1.8
4,516,251	-				+0.1
4,516,251	-				-0.7
4,516,251	-				-0.4
4,516,251	-				-1.0
4,516,251	-				+1.1
4,516,251	-				+0.2
4,516,251	-				+1.6
4,516,251	-				+0.2
4,516,251	-				-1.9
4,516,251	-				-2.4
4,516,251	-				-1.3
4,516,251	-				-1.0
4,516,251	-				+0.8
4,516,251	-				-2.6
4,516,251	-				-0.9
4,516,251	-				+0.6
4,516,251	-				-2.2
4,516,251	-				+1.0
4,516,251	-				+0.5
4,516,251	-				-0.8
4,516,251	-				+0.2
4,516,251	-				-2.4
4,516,251	-				+0.7
4,516,251	-				-0.4
4,516,257	-				+0.1
4,516,263	+				+0.2
4,516,268	+				-0.6
4,516,268	+				-1.7
4,516,268	+				-0.9
4,516,268	+				+0.2
4,516,268	+				+0.7
4,516,268	+				-1.2
4,516,270	-				-1.8
4,516,271	-				-1.7
4,516,271	-				-0.3
4,516,271	-				+1.3
4,516,271	-				-0.0
4,516,276	-				-0.9
4,516,276	-				-0.1
4,516,284	+		GFF4527	0.10	-2.8
4,516,292	-		GFF4527	0.11	-1.1
4,516,321	+		GFF4527	0.13	-1.7
4,516,326	+		GFF4527	0.13	-2.5
4,516,327	-		GFF4527	0.13	-1.0
4,516,334	+		GFF4527	0.14	-0.8
4,516,339	+		GFF4527	0.14	-2.0
4,516,339	+		GFF4527	0.14	-1.4
4,516,357	+		GFF4527	0.15	-0.7
4,516,373	+		GFF4527	0.16	-0.7
4,516,373	+		GFF4527	0.16	+0.3
4,516,381	-		GFF4527	0.17	-0.9
4,516,381	-		GFF4527	0.17	-1.3
4,516,383	-		GFF4527	0.17	-1.0
4,516,387	+		GFF4527	0.17	-0.6
4,516,398	+		GFF4527	0.18	-0.6
4,516,403	-		GFF4527	0.19	+0.5
4,516,442	-		GFF4527	0.21	+1.7
4,516,447	+		GFF4527	0.22	+0.7
4,516,452	+		GFF4527	0.22	+0.0
4,516,455	-		GFF4527	0.22	-0.5
4,516,456	+		GFF4527	0.22	+0.7
4,516,460	-		GFF4527	0.22	-0.0
4,516,466	+		GFF4527	0.23	-1.7
4,516,466	+		GFF4527	0.23	-1.8
4,516,469	-		GFF4527	0.23	-1.6
4,516,474	-		GFF4527	0.23	-0.3
4,516,474	-		GFF4527	0.23	-0.4
4,516,474	-		GFF4527	0.23	-0.2
4,516,474	-		GFF4527	0.23	-0.2
4,516,474	-		GFF4527	0.23	-0.4
4,516,474	-		GFF4527	0.23	-1.1
4,516,476	+		GFF4527	0.24	+0.5
4,516,476	-		GFF4527	0.24	-0.6
4,516,484	-		GFF4527	0.24	+0.7
4,516,508	+		GFF4527	0.26	-0.8
4,516,527	+		GFF4527	0.27	-1.3
4,516,527	+		GFF4527	0.27	-0.6
4,516,527	+		GFF4527	0.27	+0.2
4,516,527	+		GFF4527	0.27	-0.3
4,516,527	+		GFF4527	0.27	-0.8
4,516,527	+		GFF4527	0.27	-0.6
4,516,529	+		GFF4527	0.27	+0.4
4,516,535	-		GFF4527	0.28	-0.7
4,516,535	-		GFF4527	0.28	-0.9
4,516,535	-		GFF4527	0.28	+0.7
4,516,537	-		GFF4527	0.28	-0.9
4,516,563	+		GFF4527	0.30	-1.6
4,516,564	-		GFF4527	0.30	+0.3
4,516,566	+		GFF4527	0.30	+0.7
4,516,566	+		GFF4527	0.30	+0.6
4,516,571	+		GFF4527	0.30	-0.2
4,516,574	-		GFF4527	0.30	+0.5
4,516,574	-		GFF4527	0.30	-1.8
4,516,574	-		GFF4527	0.30	-0.1
4,516,574	-		GFF4527	0.30	-2.0
4,516,594	+		GFF4527	0.32	-1.8
4,516,594	+		GFF4527	0.32	-0.5
4,516,600	+		GFF4527	0.32	-1.1
4,516,600	+		GFF4527	0.32	-2.9
4,516,600	+		GFF4527	0.32	-0.3
4,516,614	+		GFF4527	0.33	-1.8
4,516,622	+		GFF4527	0.34	+1.0
4,516,622	+		GFF4527	0.34	+0.5
4,516,630	+		GFF4527	0.34	-1.3
4,516,643	-		GFF4527	0.35	-0.1
4,516,656	+		GFF4527	0.36	+1.3
4,516,657	+		GFF4527	0.36	-0.7
4,516,657	+		GFF4527	0.36	+1.1
4,516,675	+		GFF4527	0.37	+1.0
4,516,688	-		GFF4527	0.38	-0.6
4,516,694	-		GFF4527	0.39	-0.7
4,516,694	-		GFF4527	0.39	+0.1
4,516,712	+		GFF4527	0.40	-0.9
4,516,717	+		GFF4527	0.40	+0.6
4,516,722	+		GFF4527	0.41	+0.5
4,516,722	+		GFF4527	0.41	+0.4
4,516,722	+		GFF4527	0.41	-1.1
4,516,722	+		GFF4527	0.41	-0.7
4,516,725	-		GFF4527	0.41	+0.2
4,516,727	+		GFF4527	0.41	-1.6
4,516,727	+		GFF4527	0.41	-1.0
4,516,730	-		GFF4527	0.41	-0.8
4,516,730	-		GFF4527	0.41	-0.9
4,516,730	-		GFF4527	0.41	+1.4
4,516,735	-		GFF4527	0.42	+0.2
4,516,735	-		GFF4527	0.42	-2.5
4,516,743	+		GFF4527	0.42	-1.9
4,516,783	+		GFF4527	0.45	+0.8
4,516,791	-		GFF4527	0.45	-0.2
4,516,791	-		GFF4527	0.45	-0.1
4,516,796	-		GFF4527	0.46	-2.9
4,516,810	+		GFF4527	0.47	+0.9
4,516,830	-		GFF4527	0.48	-1.8
4,516,841	+		GFF4527	0.49	-0.7
4,516,841	+		GFF4527	0.49	+0.1
4,516,841	+		GFF4527	0.49	-0.5
4,516,846	+		GFF4527	0.49	-0.0
4,516,846	+		GFF4527	0.49	-1.8
4,516,849	-		GFF4527	0.49	-2.8
4,516,849	-		GFF4527	0.49	+1.1
4,516,849	-		GFF4527	0.49	-1.6
4,516,849	-		GFF4527	0.49	-0.1
4,516,854	-		GFF4527	0.50	-0.4
4,516,859	-		GFF4527	0.50	-0.3
4,516,880	+		GFF4527	0.52	-1.3
4,516,881	+		GFF4527	0.52	+0.8
4,516,903	-		GFF4527	0.53	+0.5
4,516,959	+		GFF4527	0.57	-0.2
4,516,961	-		GFF4527	0.57	-0.7
4,516,968	+		GFF4527	0.58	-0.6
4,516,968	+		GFF4527	0.58	-1.5
4,516,968	+		GFF4527	0.58	-1.9
4,516,976	-		GFF4527	0.58	+1.2
4,516,976	-		GFF4527	0.58	-0.4
4,516,976	-		GFF4527	0.58	-0.8
4,516,976	-		GFF4527	0.58	-0.5
4,516,976	-		GFF4527	0.58	+0.7
4,516,976	-		GFF4527	0.58	+0.7
4,516,976	-		GFF4527	0.58	-0.4
4,516,976	-		GFF4527	0.58	-0.2
4,516,976	-		GFF4527	0.58	-1.2
4,516,976	-		GFF4527	0.58	-2.1
4,516,983	+		GFF4527	0.59	-2.0
4,516,983	+		GFF4527	0.59	-1.5
4,516,989	-		GFF4527	0.59	+1.1
4,516,991	-		GFF4527	0.59	-1.3
4,516,992	+		GFF4527	0.59	-0.7
4,516,994	-		GFF4527	0.59	-2.0
4,516,994	-		GFF4527	0.59	-1.7
4,516,994	-		GFF4527	0.59	+0.6
4,517,003	-		GFF4527	0.60	+0.3
4,517,008	-		GFF4527	0.60	-1.8
4,517,008	-		GFF4527	0.60	-0.8
4,517,042	+		GFF4527	0.63	-1.2
4,517,042	+		GFF4527	0.63	-1.5
4,517,042	+		GFF4527	0.63	+0.4
4,517,042	+		GFF4527	0.63	+0.4
4,517,042	+		GFF4527	0.63	-1.8
4,517,042	+		GFF4527	0.63	-0.4
4,517,045	-		GFF4527	0.63	+1.0
4,517,045	-		GFF4527	0.63	+0.5
4,517,045	-		GFF4527	0.63	-0.5
4,517,047	+		GFF4527	0.63	+1.0
4,517,047	+		GFF4527	0.63	+0.8
4,517,050	-		GFF4527	0.63	+0.0
4,517,050	-		GFF4527	0.63	+0.6
4,517,050	-		GFF4527	0.63	-1.8
4,517,055	+		GFF4527	0.64	-0.6
4,517,055	+		GFF4527	0.64	-0.7
4,517,055	-		GFF4527	0.64	-0.4
4,517,059	+		GFF4527	0.64	+0.5
4,517,063	-		GFF4527	0.64	-1.2
4,517,090	+		GFF4527	0.66	-1.9
4,517,093	-		GFF4527	0.66	-1.9