Strain Fitness in Sphingobium sp. HT1-2 around GFF2869

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,925,526	-				-0.3
2,925,540	-				-1.5
2,925,542	+				-2.0
2,925,574	+				-0.5
2,925,578	-				+0.1
2,925,583	+				-0.6
2,925,588	+		GFF2868	0.10	-1.0
2,925,588	+		GFF2868	0.10	+0.8
2,925,628	+		GFF2868	0.14	-0.1
2,925,631	-		GFF2868	0.15	+0.1
2,925,645	+		GFF2868	0.16	-1.9
2,925,658	-		GFF2868	0.17	+0.9
2,925,660	-		GFF2868	0.17	-1.5
2,925,663	-		GFF2868	0.18	+1.0
2,925,665	+		GFF2868	0.18	+1.5
2,925,673	-		GFF2868	0.19	-0.7
2,925,678	-		GFF2868	0.19	-2.1
2,925,711	-		GFF2868	0.22	-0.7
2,925,713	+		GFF2868	0.23	-0.8
2,925,713	+		GFF2868	0.23	-1.5
2,925,732	+		GFF2868	0.24	-1.3
2,925,760	-		GFF2868	0.27	-2.4
2,925,769	+		GFF2868	0.28	+1.7
2,925,769	+		GFF2868	0.28	-0.3
2,925,770	+		GFF2868	0.28	+0.8
2,925,774	+		GFF2868	0.29	-0.9
2,925,777	-		GFF2868	0.29	+0.1
2,925,777	-		GFF2868	0.29	+0.5
2,925,796	+		GFF2868	0.31	-2.6
2,925,796	+		GFF2868	0.31	-1.6
2,925,806	-		GFF2868	0.32	+0.5
2,925,859	-		GFF2868	0.37	+1.1
2,925,862	-		GFF2868	0.37	-2.0
2,925,870	+		GFF2868	0.38	+0.1
2,925,870	+		GFF2868	0.38	+1.5
2,925,870	+		GFF2868	0.38	+0.1
2,925,870	+		GFF2868	0.38	-0.4
2,925,870	+		GFF2868	0.38	-0.6
2,925,870	+		GFF2868	0.38	-1.0
2,925,870	+		GFF2868	0.38	+1.4
2,925,878	-		GFF2868	0.39	-0.3
2,925,878	-		GFF2868	0.39	-2.0
2,925,878	-		GFF2868	0.39	-0.3
2,925,893	-		GFF2868	0.40	+0.7
2,925,930	-		GFF2868	0.44	-0.3
2,925,932	-		GFF2868	0.44	-0.8
2,925,963	-		GFF2868	0.47	+0.1
2,925,973	-		GFF2868	0.48	-1.3
2,925,973	-		GFF2868	0.48	-0.1
2,925,977	+		GFF2868	0.48	+0.7
2,925,991	+		GFF2868	0.50	+0.3
2,926,028	-		GFF2868	0.53	+0.4
2,926,041	-		GFF2868	0.55	-0.4
2,926,077	+		GFF2868	0.58	-0.9
2,926,080	-		GFF2868	0.58	+0.9
2,926,085	-		GFF2868	0.59	-0.4
2,926,085	-		GFF2868	0.59	-2.0
2,926,085	-		GFF2868	0.59	-1.1
2,926,134	-		GFF2868	0.64	-0.9
2,926,134	-		GFF2868	0.64	-1.4
2,926,144	+		GFF2868	0.65	-1.1
2,926,175	-		GFF2868	0.68	-0.2
2,926,189	-		GFF2868	0.69	-0.4
2,926,201	+		GFF2868	0.70	+0.3
2,926,204	-		GFF2868	0.71	-0.3
2,926,209	-		GFF2868	0.71	+0.1
2,926,209	-		GFF2868	0.71	-0.3
2,926,216	+		GFF2868	0.72	-1.0
2,926,222	+		GFF2868	0.72	-0.3
2,926,230	-		GFF2868	0.73	-1.3
2,926,247	-		GFF2868	0.75	-0.3
2,926,247	-		GFF2868	0.75	-0.4
2,926,265	+		GFF2868	0.77	-2.0
2,926,292	-		GFF2868	0.79	-3.8
2,926,317	+		GFF2868	0.82	-1.5
2,926,320	-		GFF2868	0.82	-0.5
2,926,344	-		GFF2868	0.84	-1.1
2,926,394	+		GFF2868	0.89	-1.5
2,926,402	-				-1.2
2,926,413	+				-0.0
2,926,413	+				+0.3
2,926,413	+				+0.1
2,926,416	-				+1.0
2,926,421	-				+0.7
2,926,421	-				+0.1
2,926,435	+				+0.5
2,926,448	-				+0.2
2,926,455	+				-1.2
2,926,455	+				+0.4
2,926,455	+				-0.9
2,926,455	+				-0.7
2,926,455	+				-0.5
2,926,455	+				-2.1
2,926,455	+				+2.3
2,926,455	+				-2.0
2,926,455	+				-0.6
2,926,455	+				+0.9
2,926,455	+				-0.0
2,926,463	-				+1.3
2,926,463	-				+0.8
2,926,463	-				+0.0
2,926,463	-				-2.7
2,926,463	-				-1.8
2,926,468	-				+1.7
2,926,468	-				-0.3
2,926,470	+				+0.1
2,926,478	-				-0.1
2,926,508	+				-0.6
2,926,513	+				-0.9
2,926,513	+				+0.1
2,926,516	-				-0.8
2,926,521	-				+1.8
2,926,535	-				-0.0
2,926,550	-				-1.2
2,926,555	-				-1.4
2,926,564	+				-0.0
2,926,577	-				-1.3
2,926,591	-		GFF2869	0.10	-0.0
2,926,615	+		GFF2869	0.13	-1.0
2,926,620	+		GFF2869	0.13	+0.5
2,926,620	+		GFF2869	0.13	+0.6
2,926,623	-		GFF2869	0.14	-2.4
2,926,625	+		GFF2869	0.14	+0.9
2,926,628	-		GFF2869	0.14	-0.6
2,926,630	-		GFF2869	0.14	+0.5
2,926,667	+		GFF2869	0.19	-0.2
2,926,667	+		GFF2869	0.19	+0.3
2,926,667	+		GFF2869	0.19	-0.1
2,926,688	-		GFF2869	0.21	-1.0
2,926,688	-		GFF2869	0.21	-1.4
2,926,697	-		GFF2869	0.22	-1.0
2,926,706	+		GFF2869	0.23	+1.0
2,926,707	-		GFF2869	0.23	+0.6
2,926,713	+		GFF2869	0.24	-1.2
2,926,727	+		GFF2869	0.25	-0.6
2,926,735	-		GFF2869	0.26	+0.8
2,926,735	-		GFF2869	0.26	-0.1
2,926,735	-		GFF2869	0.26	+0.9
2,926,739	+		GFF2869	0.27	-1.6
2,926,746	+		GFF2869	0.27	-0.5
2,926,771	+		GFF2869	0.30	-0.5
2,926,771	+		GFF2869	0.30	-2.1
2,926,784	+		GFF2869	0.32	+0.0
2,926,845	+		GFF2869	0.38	-0.6
2,926,845	+		GFF2869	0.38	+0.1
2,926,846	+		GFF2869	0.38	+0.4
2,926,853	+		GFF2869	0.39	+0.2
2,926,853	+		GFF2869	0.39	-1.5
2,926,877	+		GFF2869	0.42	-1.0
2,926,916	-		GFF2869	0.46	-1.1
2,926,916	-		GFF2869	0.46	-1.6
2,926,942	+		GFF2869	0.49	-1.3
2,926,942	+		GFF2869	0.49	+0.4
2,926,942	+		GFF2869	0.49	-0.7
2,926,942	+		GFF2869	0.49	+0.4
2,926,942	+		GFF2869	0.49	-0.7
2,926,942	+		GFF2869	0.49	-0.0
2,926,942	+		GFF2869	0.49	+0.0
2,926,942	+		GFF2869	0.49	-1.1
2,926,950	-		GFF2869	0.50	-0.8
2,926,950	-		GFF2869	0.50	-1.2
2,926,950	-		GFF2869	0.50	+0.6
2,926,950	-		GFF2869	0.50	-0.5
2,926,950	-		GFF2869	0.50	-0.7
2,926,950	-		GFF2869	0.50	-2.8
2,926,961	+		GFF2869	0.51	-1.5
2,926,966	+		GFF2869	0.52	-0.4
2,926,976	+		GFF2869	0.53	-1.2
2,926,976	+		GFF2869	0.53	-2.2
2,926,976	+		GFF2869	0.53	-0.2
2,926,976	+		GFF2869	0.53	-0.0
2,926,984	-		GFF2869	0.54	-0.4
2,926,984	-		GFF2869	0.54	+0.0
2,926,984	-		GFF2869	0.54	-0.5
2,926,984	-		GFF2869	0.54	-1.5
2,926,984	-		GFF2869	0.54	-0.0
2,926,996	+		GFF2869	0.55	-0.4
2,927,026	-		GFF2869	0.59	-0.6
2,927,104	+		GFF2869	0.67	+0.4
2,927,107	-		GFF2869	0.68	-0.1
2,927,107	-		GFF2869	0.68	-1.1
2,927,111	+		GFF2869	0.68	-0.0
2,927,174	-		GFF2869	0.75	-0.5
2,927,177	+		GFF2869	0.75	-0.2
2,927,177	+		GFF2869	0.75	-3.2
2,927,177	+		GFF2869	0.75	+0.8
2,927,177	+		GFF2869	0.75	-0.9
2,927,185	-		GFF2869	0.76	-0.3
2,927,185	-		GFF2869	0.76	-0.4
2,927,185	-		GFF2869	0.76	+0.9
2,927,193	+		GFF2869	0.77	+0.4
2,927,194	+		GFF2869	0.77	-1.6
2,927,201	-		GFF2869	0.78	+0.0
2,927,201	-		GFF2869	0.78	-0.4
2,927,201	-		GFF2869	0.78	+0.6
2,927,202	-		GFF2869	0.78	+0.2
2,927,211	+		GFF2869	0.79	-0.4
2,927,224	-		GFF2869	0.81	-0.8
2,927,224	-		GFF2869	0.81	-1.7
2,927,244	-		GFF2869	0.83	+0.6
2,927,250	+		GFF2869	0.84	+0.1
2,927,250	+		GFF2869	0.84	-1.5
2,927,250	+		GFF2869	0.84	-1.5
2,927,250	+		GFF2869	0.84	+1.0
2,927,250	+		GFF2869	0.84	+0.2
2,927,258	-		GFF2869	0.84	-0.4
2,927,258	-		GFF2869	0.84	+0.7
2,927,258	-		GFF2869	0.84	+0.3
2,927,258	-		GFF2869	0.84	-1.3
2,927,276	-		GFF2869	0.86	+0.7
2,927,301	+		GFF2869	0.89	-0.8
2,927,309	-				-1.7
2,927,327	+				-1.3
2,927,327	+				+0.7
2,927,327	+				-0.8
2,927,332	+				-0.9
2,927,335	-				-0.7
2,927,340	-				+0.1
2,927,350	+				+0.1
2,927,351	-				-1.8
2,927,358	-				-1.6
2,927,358	-				-0.0
2,927,358	-				-0.9
2,927,369	+				-0.2
2,927,372	-				+0.4
2,927,372	-				-0.2
2,927,372	-				-2.4
2,927,377	-				-0.3
2,927,410	+				-1.0
2,927,420	+				+0.9
2,927,452	+				-0.0
2,927,499	+				-0.7
2,927,507	-				+1.4
2,927,522	+				-0.7
2,927,551	+				-1.2
2,927,558	+				+0.2
2,927,595	+		GFF2870	0.12	-0.3
2,927,610	+		GFF2870	0.13	-0.9
2,927,645	+		GFF2870	0.16	-0.2
2,927,645	+		GFF2870	0.16	+0.2
2,927,645	+		GFF2870	0.16	-1.4
2,927,645	+		GFF2870	0.16	-1.3
2,927,653	-		GFF2870	0.17	-0.7
2,927,653	-		GFF2870	0.17	+1.8
2,927,654	-		GFF2870	0.17	+0.2
2,927,654	-		GFF2870	0.17	+0.5
2,927,654	-		GFF2870	0.17	+0.6
2,927,702	+		GFF2870	0.21	+0.9
2,927,726	+		GFF2870	0.23	-1.5
2,927,786	+		GFF2870	0.28	+1.0
2,927,786	+		GFF2870	0.28	-2.2
2,927,809	-		GFF2870	0.30	-0.4
2,927,814	-		GFF2870	0.31	-2.3
2,927,816	+		GFF2870	0.31	-0.8
2,927,833	+		GFF2870	0.32	-0.1
2,927,841	-		GFF2870	0.33	-1.0
2,927,846	-		GFF2870	0.33	+0.8
2,927,852	-		GFF2870	0.34	-0.2
2,927,874	+		GFF2870	0.36	-1.3
2,927,876	-		GFF2870	0.36	+0.7
2,927,882	-		GFF2870	0.36	-0.3
2,927,894	+		GFF2870	0.38	-0.6
2,927,894	+		GFF2870	0.38	+1.1
2,927,894	+		GFF2870	0.38	-0.0
2,927,894	+		GFF2870	0.38	-0.1
2,927,894	+		GFF2870	0.38	-0.4
2,927,894	+		GFF2870	0.38	-0.4
2,927,894	+		GFF2870	0.38	-1.3
2,927,894	+		GFF2870	0.38	-1.2
2,927,894	+		GFF2870	0.38	-1.9
2,927,894	+		GFF2870	0.38	-0.2
2,927,894	+		GFF2870	0.38	+0.7
2,927,894	+		GFF2870	0.38	-1.4
2,927,894	+		GFF2870	0.38	-0.7
2,927,894	+		GFF2870	0.38	-0.7
2,927,901	-		GFF2870	0.38	-0.8
2,927,902	-		GFF2870	0.38	+0.6
2,927,902	-		GFF2870	0.38	+0.6
2,927,902	-		GFF2870	0.38	-0.4
2,927,902	-		GFF2870	0.38	+1.1
2,927,902	-		GFF2870	0.38	-2.1
2,927,902	-		GFF2870	0.38	+0.6
2,927,902	-		GFF2870	0.38	-0.3
2,927,902	-		GFF2870	0.38	+0.5
2,927,903	-		GFF2870	0.38	-0.4
2,927,909	-		GFF2870	0.39	+0.3
2,927,910	+		GFF2870	0.39	-0.8
2,927,918	-		GFF2870	0.40	-0.0
2,927,930	-		GFF2870	0.41	+0.2
2,927,939	+		GFF2870	0.41	-0.2
2,927,947	-		GFF2870	0.42	+0.1
2,927,958	+		GFF2870	0.43	-0.7
2,927,963	+		GFF2870	0.43	-0.3
2,927,963	+		GFF2870	0.43	-1.3
2,927,971	-		GFF2870	0.44	+0.4
2,927,992	+		GFF2870	0.46	+0.2
2,928,052	-		GFF2870	0.51	-0.3
2,928,078	+		GFF2870	0.53	-0.4
2,928,087	+		GFF2870	0.54	-0.3
2,928,090	-		GFF2870	0.55	+1.1
2,928,107	-		GFF2870	0.56	-1.0
2,928,113	+		GFF2870	0.57	+0.3
2,928,121	+		GFF2870	0.57	-0.5
2,928,122	+		GFF2870	0.57	-1.9
2,928,122	+		GFF2870	0.57	-1.0
2,928,122	-		GFF2870	0.57	+0.9
2,928,166	+		GFF2870	0.61	+0.3
2,928,168	+		GFF2870	0.61	-0.0
2,928,175	-		GFF2870	0.62	-1.8
2,928,177	+		GFF2870	0.62	-0.1
2,928,178	+		GFF2870	0.62	-0.4
2,928,178	+		GFF2870	0.62	-0.8
2,928,183	+		GFF2870	0.63	+0.6
2,928,183	+		GFF2870	0.63	+1.8
2,928,186	-		GFF2870	0.63	-0.1
2,928,186	-		GFF2870	0.63	-0.8
2,928,188	+		GFF2870	0.63	+0.4
2,928,188	+		GFF2870	0.63	-0.2
2,928,188	+		GFF2870	0.63	-0.1
2,928,188	+		GFF2870	0.63	+0.2
2,928,193	+		GFF2870	0.63	-0.1
2,928,196	-		GFF2870	0.64	-1.6
2,928,196	-		GFF2870	0.64	-1.5
2,928,196	-		GFF2870	0.64	-1.2
2,928,196	-		GFF2870	0.64	-0.1
2,928,196	-		GFF2870	0.64	-2.2
2,928,196	-		GFF2870	0.64	+0.9
2,928,201	-		GFF2870	0.64	+1.1
2,928,201	-		GFF2870	0.64	-2.2
2,928,201	-		GFF2870	0.64	-0.1
2,928,201	-		GFF2870	0.64	+0.2
2,928,201	-		GFF2870	0.64	-0.2
2,928,223	+		GFF2870	0.66	+0.2
2,928,225	-		GFF2870	0.66	-1.2
2,928,231	-		GFF2870	0.67	+1.1
2,928,233	-		GFF2870	0.67	-0.3
2,928,272	+		GFF2870	0.70	+0.0
2,928,272	+		GFF2870	0.70	-0.8
2,928,281	-		GFF2870	0.71	-0.8
2,928,281	-		GFF2870	0.71	+0.2
2,928,306	+		GFF2870	0.73	-0.4
2,928,330	-		GFF2870	0.75	-2.3
2,928,338	+		GFF2870	0.76	-2.0
2,928,347	-		GFF2870	0.77	+2.0
2,928,354	+		GFF2870	0.77	-0.2
2,928,354	+		GFF2870	0.77	+0.5
2,928,354	+		GFF2870	0.77	-1.5
2,928,357	+		GFF2870	0.78	+0.3
2,928,385	+		GFF2870	0.80	-0.7
2,928,395	+		GFF2870	0.81	+1.3
2,928,395	+		GFF2870	0.81	+1.4
2,928,395	+		GFF2870	0.81	-0.6