Strain Fitness in Sphingobium sp. HT1-2 around GFF2596

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,611,558	-				-0.1
2,611,584	-				-0.3
2,611,588	+				-0.4
2,611,588	+				-1.7
2,611,593	-				-0.2
2,611,596	-				-1.6
2,611,596	-				-1.6
2,611,596	-				-1.3
2,611,603	+				-1.5
2,611,605	+				-1.1
2,611,606	-				-1.7
2,611,611	+				-0.8
2,611,611	-				-1.0
2,611,611	-				-1.4
2,611,638	-		GFF2595	0.12	+0.4
2,611,651	+		GFF2595	0.13	+1.4
2,611,657	+		GFF2595	0.14	-0.8
2,611,689	+		GFF2595	0.17	-1.6
2,611,689	+		GFF2595	0.17	-1.5
2,611,689	+		GFF2595	0.17	+0.4
2,611,689	+		GFF2595	0.17	-0.1
2,611,697	-		GFF2595	0.18	-1.1
2,611,697	-		GFF2595	0.18	-1.4
2,611,697	-		GFF2595	0.18	-0.3
2,611,697	-		GFF2595	0.18	-0.7
2,611,721	+		GFF2595	0.20	-0.1
2,611,721	+		GFF2595	0.20	+0.1
2,611,724	-		GFF2595	0.20	-1.0
2,611,724	-		GFF2595	0.20	-0.8
2,611,730	+		GFF2595	0.21	-1.1
2,611,740	+		GFF2595	0.22	-1.4
2,611,748	-		GFF2595	0.23	+0.4
2,611,776	+		GFF2595	0.26	-2.5
2,611,776	+		GFF2595	0.26	-1.4
2,611,781	-		GFF2595	0.26	-0.2
2,611,784	-		GFF2595	0.26	-0.9
2,611,784	-		GFF2595	0.26	-0.9
2,611,784	-		GFF2595	0.26	-1.4
2,611,791	+		GFF2595	0.27	-0.8
2,611,791	+		GFF2595	0.27	+0.2
2,611,794	-		GFF2595	0.27	-0.1
2,611,799	-		GFF2595	0.28	-0.9
2,611,799	-		GFF2595	0.28	-1.4
2,611,813	+		GFF2595	0.29	-1.6
2,611,818	+		GFF2595	0.30	-0.4
2,611,825	-		GFF2595	0.31	-1.5
2,611,841	+		GFF2595	0.32	-1.1
2,611,849	-		GFF2595	0.33	+1.5
2,611,856	+		GFF2595	0.34	-1.5
2,611,864	+		GFF2595	0.35	-1.1
2,611,866	-		GFF2595	0.35	-0.5
2,611,882	+		GFF2595	0.36	+0.5
2,611,915	+		GFF2595	0.40	-2.4
2,611,915	+		GFF2595	0.40	-1.9
2,611,923	-		GFF2595	0.41	-0.8
2,611,966	+		GFF2595	0.45	-1.0
2,611,974	-		GFF2595	0.46	-0.5
2,612,014	+		GFF2595	0.50	+0.1
2,612,019	+		GFF2595	0.50	-2.1
2,612,019	+		GFF2595	0.50	+0.8
2,612,022	-		GFF2595	0.51	-0.4
2,612,027	-		GFF2595	0.51	-0.4
2,612,027	-		GFF2595	0.51	-1.4
2,612,027	-		GFF2595	0.51	-1.4
2,612,033	-		GFF2595	0.52	-0.7
2,612,043	-		GFF2595	0.53	-1.2
2,612,057	-		GFF2595	0.54	-0.9
2,612,058	+		GFF2595	0.54	-0.4
2,612,058	-		GFF2595	0.54	-1.5
2,612,059	+		GFF2595	0.54	-0.8
2,612,063	+		GFF2595	0.55	-0.5
2,612,071	-		GFF2595	0.56	-1.8
2,612,077	-		GFF2595	0.56	+0.1
2,612,084	+		GFF2595	0.57	-2.4
2,612,089	+		GFF2595	0.57	-0.3
2,612,097	-		GFF2595	0.58	-0.3
2,612,101	-		GFF2595	0.59	-2.3
2,612,126	-		GFF2595	0.61	+0.0
2,612,127	+		GFF2595	0.61	-1.8
2,612,135	-		GFF2595	0.62	-1.5
2,612,145	+		GFF2595	0.63	+0.0
2,612,166	-		GFF2595	0.65	-1.2
2,612,227	-		GFF2595	0.71	+0.0
2,612,230	+		GFF2595	0.72	-0.1
2,612,231	+		GFF2595	0.72	-0.4
2,612,233	-		GFF2595	0.72	-0.2
2,612,236	+		GFF2595	0.72	-0.7
2,612,236	+		GFF2595	0.72	-1.6
2,612,244	-		GFF2595	0.73	-0.6
2,612,256	+		GFF2595	0.74	-2.5
2,612,278	+		GFF2595	0.77	+0.2
2,612,286	-		GFF2595	0.77	-2.1
2,612,316	+		GFF2595	0.80	+0.4
2,612,350	-		GFF2595	0.84	-0.1
2,612,352	+		GFF2595	0.84	-1.3
2,612,356	+		GFF2595	0.85	-0.0
2,612,360	+		GFF2595	0.85	-0.8
2,612,360	-		GFF2595	0.85	-1.2
2,612,368	-		GFF2595	0.86	-0.5
2,612,368	-		GFF2595	0.86	+0.2
2,612,368	-		GFF2595	0.86	-0.3
2,612,373	+		GFF2595	0.86	-1.8
2,612,386	-		GFF2595	0.88	-0.6
2,612,393	+		GFF2595	0.88	-1.0
2,612,393	+		GFF2595	0.88	+0.8
2,612,401	-		GFF2595	0.89	-0.7
2,612,401	-		GFF2595	0.89	-0.8
2,612,411	-				-1.4
2,612,420	+				-0.5
2,612,454	+				-0.3
2,612,460	-				+0.9
2,612,465	-				-1.7
2,612,466	+				-0.3
2,612,491	-				-2.2
2,612,501	-				-2.9
2,612,501	-				-0.9
2,612,504	+				-0.4
2,612,504	+				-0.7
2,612,504	+				-1.4
2,612,504	+				+0.6
2,612,509	+				+0.8
2,612,509	+				-1.1
2,612,511	-				-0.3
2,612,511	-				-2.3
2,612,512	-				-2.7
2,612,512	-				-0.1
2,612,512	-				+0.1
2,612,512	-				-2.2
2,612,517	-				+0.3
2,612,543	-				+0.1
2,612,549	+				-2.6
2,612,562	+				-0.9
2,612,595	+				-0.8
2,612,595	+				-0.9
2,612,644	+				-0.2
2,612,644	+				-1.1
2,612,649	+				+0.2
2,612,660	+				+0.1
2,612,663	+		GFF2596	0.10	-0.0
2,612,663	+		GFF2596	0.10	-2.2
2,612,663	+		GFF2596	0.10	-1.2
2,612,663	+		GFF2596	0.10	+0.6
2,612,663	+		GFF2596	0.10	-2.1
2,612,670	-		GFF2596	0.11	-3.3
2,612,671	-		GFF2596	0.11	-1.4
2,612,671	-		GFF2596	0.11	-2.2
2,612,671	-		GFF2596	0.11	+0.8
2,612,677	-		GFF2596	0.12	-1.8
2,612,731	+		GFF2596	0.16	+0.1
2,612,731	+		GFF2596	0.16	-0.4
2,612,731	+		GFF2596	0.16	+0.6
2,612,731	+		GFF2596	0.16	-0.5
2,612,731	+		GFF2596	0.16	+0.8
2,612,731	+		GFF2596	0.16	-0.4
2,612,739	-		GFF2596	0.17	-0.8
2,612,739	-		GFF2596	0.17	-0.7
2,612,739	-		GFF2596	0.17	-0.3
2,612,739	-		GFF2596	0.17	-1.3
2,612,754	+		GFF2596	0.19	-1.5
2,612,778	+		GFF2596	0.21	-1.1
2,612,800	+		GFF2596	0.23	-1.4
2,612,800	+		GFF2596	0.23	-2.2
2,612,808	+		GFF2596	0.24	-0.3
2,612,808	+		GFF2596	0.24	-2.3
2,612,809	+		GFF2596	0.24	+0.6
2,612,810	+		GFF2596	0.24	+0.0
2,612,810	+		GFF2596	0.24	-1.2
2,612,810	+		GFF2596	0.24	-0.3
2,612,810	+		GFF2596	0.24	-1.3
2,612,810	+		GFF2596	0.24	-0.5
2,612,810	+		GFF2596	0.24	-0.8
2,612,810	+		GFF2596	0.24	-0.8
2,612,810	+		GFF2596	0.24	-0.6
2,612,810	+		GFF2596	0.24	-0.9
2,612,810	+		GFF2596	0.24	+0.3
2,612,810	+		GFF2596	0.24	-2.0
2,612,810	+		GFF2596	0.24	-2.4
2,612,810	+		GFF2596	0.24	+0.5
2,612,810	+		GFF2596	0.24	-1.3
2,612,810	+		GFF2596	0.24	-1.2
2,612,810	+		GFF2596	0.24	-1.0
2,612,810	+		GFF2596	0.24	+0.3
2,612,810	+		GFF2596	0.24	+0.5
2,612,810	+		GFF2596	0.24	-0.7
2,612,810	+		GFF2596	0.24	-1.4
2,612,810	+		GFF2596	0.24	-2.2
2,612,813	-		GFF2596	0.24	-2.5
2,612,816	-		GFF2596	0.24	-1.1
2,612,818	-		GFF2596	0.24	-1.5
2,612,818	-		GFF2596	0.24	+0.3
2,612,818	-		GFF2596	0.24	-1.4
2,612,818	-		GFF2596	0.24	-1.8
2,612,818	-		GFF2596	0.24	-1.2
2,612,818	-		GFF2596	0.24	+0.4
2,612,818	-		GFF2596	0.24	-2.6
2,612,818	-		GFF2596	0.24	-0.4
2,612,818	-		GFF2596	0.24	-0.1
2,612,818	-		GFF2596	0.24	-1.1
2,612,818	-		GFF2596	0.24	-1.4
2,612,818	-		GFF2596	0.24	-1.8
2,612,818	-		GFF2596	0.24	-1.2
2,612,818	-		GFF2596	0.24	-0.9
2,612,818	-		GFF2596	0.24	-3.3
2,612,856	-		GFF2596	0.28	-0.8
2,612,862	+		GFF2596	0.28	-1.4
2,612,870	-		GFF2596	0.29	-0.9
2,612,870	-		GFF2596	0.29	+0.4
2,612,870	-		GFF2596	0.29	-1.7
2,612,899	+		GFF2596	0.32	-0.8
2,612,909	+		GFF2596	0.33	+0.8
2,612,913	+		GFF2596	0.33	-1.4
2,612,917	-		GFF2596	0.34	-2.0
2,612,917	-		GFF2596	0.34	-0.5
2,612,937	+		GFF2596	0.35	-0.0
2,612,937	+		GFF2596	0.35	-1.6
2,612,944	-		GFF2596	0.36	+0.4
2,612,946	+		GFF2596	0.36	-0.5
2,612,952	-		GFF2596	0.37	-0.9
2,612,962	-		GFF2596	0.38	-0.2
2,612,976	-		GFF2596	0.39	-1.2
2,612,978	-		GFF2596	0.39	-0.8
2,612,981	+		GFF2596	0.39	-1.0
2,612,993	-		GFF2596	0.40	-1.5
2,613,030	-		GFF2596	0.44	-0.5
2,613,043	-		GFF2596	0.45	-0.7
2,613,056	+		GFF2596	0.46	+0.2
2,613,058	-		GFF2596	0.46	-0.9
2,613,059	-		GFF2596	0.47	-1.1
2,613,083	-		GFF2596	0.49	-1.5
2,613,133	+		GFF2596	0.53	-0.5
2,613,141	+		GFF2596	0.54	-1.6
2,613,141	+		GFF2596	0.54	-1.9
2,613,149	-		GFF2596	0.55	-1.5
2,613,181	-		GFF2596	0.58	-1.3
2,613,192	+		GFF2596	0.59	-3.1
2,613,209	+		GFF2596	0.60	+0.9
2,613,218	+		GFF2596	0.61	-0.4
2,613,244	-		GFF2596	0.63	-0.4
2,613,255	+		GFF2596	0.64	-0.5
2,613,255	+		GFF2596	0.64	-0.6
2,613,257	+		GFF2596	0.65	-1.1
2,613,263	-		GFF2596	0.65	-1.5
2,613,263	-		GFF2596	0.65	-1.4
2,613,265	+		GFF2596	0.65	-0.5
2,613,265	+		GFF2596	0.65	+0.3
2,613,292	-		GFF2596	0.68	-1.6
2,613,326	-		GFF2596	0.71	+0.6
2,613,345	+		GFF2596	0.73	-0.8
2,613,366	+		GFF2596	0.75	-0.4
2,613,389	-		GFF2596	0.77	-1.9
2,613,398	+		GFF2596	0.78	+0.6
2,613,408	+		GFF2596	0.78	-0.4
2,613,416	-		GFF2596	0.79	-1.2
2,613,416	-		GFF2596	0.79	-2.2
2,613,416	-		GFF2596	0.79	-1.7
2,613,416	-		GFF2596	0.79	+0.4
2,613,435	+		GFF2596	0.81	-1.4
2,613,438	-		GFF2596	0.81	-1.4
2,613,465	+		GFF2596	0.84	-0.7
2,613,465	+		GFF2596	0.84	+0.0
2,613,465	+		GFF2596	0.84	-0.9
2,613,473	-		GFF2596	0.84	+0.4
2,613,491	-		GFF2596	0.86	-1.3
2,613,494	+		GFF2596	0.86	-0.6
2,613,502	-		GFF2596	0.87	-0.0
2,613,512	+		GFF2596	0.88	-0.0
2,613,518	+		GFF2596	0.89	+0.6
2,613,518	+		GFF2596	0.89	-0.6
2,613,520	-		GFF2596	0.89	-1.5
2,613,520	-		GFF2596	0.89	-2.9
2,613,525	-		GFF2596	0.89	-1.7
2,613,526	-		GFF2596	0.89	-2.4
2,613,526	-		GFF2596	0.89	+0.4
2,613,526	-		GFF2596	0.89	-0.4
2,613,526	-		GFF2596	0.89	-2.7
2,613,528	+		GFF2596	0.89	-0.3
2,613,528	+		GFF2596	0.89	-2.6
2,613,528	+		GFF2596	0.89	-0.7
2,613,543	-				-1.6
2,613,546	+				-2.4
2,613,546	+				-0.6
2,613,547	+				-0.6
2,613,558	-				-2.2
2,613,560	+				-0.7
2,613,560	+				-0.9
2,613,560	+				-0.7
2,613,560	+				-2.5
2,613,568	-				-0.3
2,613,568	-				+0.0
2,613,571	-				-2.1
2,613,573	-				-0.7
2,613,582	+				-1.2
2,613,582	+				-1.4
2,613,634	+				-1.7
2,613,649	+				-0.2
2,613,652	+				-0.5
2,613,665	+				-0.8
2,613,665	+				-0.6
2,613,673	-				-0.1
2,613,681	+				+0.8
2,613,683	+				-1.2
2,613,689	-		GFF2597	0.10	-0.9
2,613,741	+		GFF2597	0.24	-1.2
2,613,752	+		GFF2597	0.27	-0.8
2,613,760	-		GFF2597	0.29	-0.4
2,613,774	+		GFF2597	0.32	-0.2
2,613,774	-		GFF2597	0.32	-0.3
2,613,774	-		GFF2597	0.32	-0.3
2,613,782	-		GFF2597	0.34	-2.0
2,613,782	-		GFF2597	0.34	-1.2
2,613,794	-		GFF2597	0.38	+0.5
2,613,796	+		GFF2597	0.38	+0.4
2,613,800	+		GFF2597	0.39	-1.4
2,613,804	-		GFF2597	0.40	-2.0
2,613,804	-		GFF2597	0.40	-2.2
2,613,814	-		GFF2597	0.43	+0.5
2,613,825	+		GFF2597	0.46	-0.5
2,613,833	+		GFF2597	0.48	-1.8
2,613,833	+		GFF2597	0.48	-2.4
2,613,841	-		GFF2597	0.50	-1.5
2,613,847	+		GFF2597	0.51	-2.3
2,613,852	+		GFF2597	0.53	+0.1
2,613,852	+		GFF2597	0.53	+1.0
2,613,852	+		GFF2597	0.53	-1.4
2,613,852	+		GFF2597	0.53	-1.5
2,613,852	+		GFF2597	0.53	+0.4
2,613,852	+		GFF2597	0.53	-1.6
2,613,857	+		GFF2597	0.54	-0.9
2,613,857	+		GFF2597	0.54	+0.0
2,613,857	+		GFF2597	0.54	-0.5
2,613,857	+		GFF2597	0.54	-2.1
2,613,857	+		GFF2597	0.54	+0.7
2,613,857	+		GFF2597	0.54	+0.0
2,613,857	+		GFF2597	0.54	-1.5
2,613,857	+		GFF2597	0.54	-1.8
2,613,857	+		GFF2597	0.54	-0.4
2,613,857	+		GFF2597	0.54	-2.0
2,613,857	+		GFF2597	0.54	-2.2
2,613,857	+		GFF2597	0.54	-1.8
2,613,857	+		GFF2597	0.54	-0.1
2,613,857	+		GFF2597	0.54	-2.1
2,613,857	+		GFF2597	0.54	-0.9
2,613,857	+		GFF2597	0.54	-1.3
2,613,857	+		GFF2597	0.54	+0.1
2,613,857	+		GFF2597	0.54	-0.9
2,613,857	+		GFF2597	0.54	-1.5
2,613,857	+		GFF2597	0.54	-0.6
2,613,857	+		GFF2597	0.54	-1.2
2,613,857	+		GFF2597	0.54	-2.1
2,613,857	+		GFF2597	0.54	-1.8
2,613,857	+		GFF2597	0.54	+0.7
2,613,857	+		GFF2597	0.54	+0.6
2,613,859	+		GFF2597	0.55	+1.3
2,613,859	+		GFF2597	0.55	-1.8
2,613,859	+		GFF2597	0.55	-0.7
2,613,860	-		GFF2597	0.55	-0.6
2,613,860	-		GFF2597	0.55	-0.6
2,613,860	-		GFF2597	0.55	-1.1
2,613,860	-		GFF2597	0.55	+0.8
2,613,862	-		GFF2597	0.55	-0.7
2,613,865	-		GFF2597	0.56	-1.5
2,613,865	-		GFF2597	0.56	-0.2
2,613,865	-		GFF2597	0.56	-1.5
2,613,865	-		GFF2597	0.56	-0.4
2,613,865	-		GFF2597	0.56	+0.5
2,613,865	-		GFF2597	0.56	-1.4
2,613,865	-		GFF2597	0.56	+0.3
2,613,865	-		GFF2597	0.56	-1.7
2,613,865	-		GFF2597	0.56	-1.5
2,613,865	-		GFF2597	0.56	-0.8
2,613,865	-		GFF2597	0.56	-0.6
2,613,865	-		GFF2597	0.56	-0.5
2,613,865	-		GFF2597	0.56	-0.4
2,613,865	-		GFF2597	0.56	-1.2
2,613,865	-		GFF2597	0.56	-1.1
2,613,867	-		GFF2597	0.57	+0.0
2,613,867	-		GFF2597	0.57	-1.9
2,613,867	-		GFF2597	0.57	-0.9
2,613,867	-		GFF2597	0.57	+0.2
2,613,875	-		GFF2597	0.59	-0.2
2,613,889	+		GFF2597	0.62	+0.1
2,613,899	-		GFF2597	0.65	-1.6
2,613,899	-		GFF2597	0.65	-1.6
2,613,936	+		GFF2597	0.75	-0.9
2,613,937	-		GFF2597	0.75	-2.6
2,613,942	-		GFF2597	0.76	+0.6
2,613,942	-		GFF2597	0.76	-2.0
2,613,942	-		GFF2597	0.76	+0.6
2,613,944	+		GFF2597	0.77	-1.7
2,613,976	-		GFF2597	0.85	-0.4
2,614,026	+				-1.9
2,614,034	-				+0.3
2,614,034	-				-1.6
2,614,073	+				-1.8
2,614,081	-				+0.0
2,614,087	+				-1.2
2,614,105	+				+1.0
2,614,109	+				-0.5
2,614,119	-				-0.5
2,614,145	-				-2.1
2,614,145	-				+0.2
2,614,151	+				-1.5
2,614,181	+		GFF2598	0.11	-0.7
2,614,210	-		GFF2598	0.13	-0.8
2,614,211	-		GFF2598	0.13	-2.2
2,614,216	-		GFF2598	0.13	-1.2
2,614,216	-		GFF2598	0.13	-0.5
2,614,224	-		GFF2598	0.14	+0.0
2,614,226	+		GFF2598	0.14	+0.0
2,614,229	-		GFF2598	0.14	-0.0
2,614,257	+		GFF2598	0.16	-0.4
2,614,279	+		GFF2598	0.17	+1.0
2,614,279	+		GFF2598	0.17	-1.8
2,614,279	+		GFF2598	0.17	+0.2
2,614,287	-		GFF2598	0.18	-0.7
2,614,287	-		GFF2598	0.18	-0.1
2,614,287	-		GFF2598	0.18	+0.8
2,614,288	+		GFF2598	0.18	-0.4
2,614,296	-		GFF2598	0.18	+0.1
2,614,297	-		GFF2598	0.19	+0.6
2,614,303	+		GFF2598	0.19	-1.1
2,614,310	+		GFF2598	0.19	+0.9
2,614,310	+		GFF2598	0.19	-1.1
2,614,311	-		GFF2598	0.20	-0.6
2,614,311	-		GFF2598	0.20	-2.5
2,614,331	-		GFF2598	0.21	-2.3
2,614,347	+		GFF2598	0.22	+0.0
2,614,351	+		GFF2598	0.22	-0.6
2,614,353	-		GFF2598	0.22	-1.2
2,614,369	+		GFF2598	0.24	-3.1
2,614,374	+		GFF2598	0.24	+0.7
2,614,382	-		GFF2598	0.24	-0.3
2,614,382	-		GFF2598	0.24	-1.9
2,614,382	-		GFF2598	0.24	-2.2
2,614,387	-		GFF2598	0.25	-2.6
2,614,396	+		GFF2598	0.25	-0.7
2,614,422	+		GFF2598	0.27	-1.6
2,614,463	+		GFF2598	0.30	-1.9
2,614,473	+		GFF2598	0.31	-0.3
2,614,481	-		GFF2598	0.31	+0.2
2,614,481	-		GFF2598	0.31	+0.2
2,614,491	-		GFF2598	0.32	-1.5
2,614,491	-		GFF2598	0.32	+0.8
2,614,497	-		GFF2598	0.32	+0.9
2,614,512	+		GFF2598	0.33	-1.7
2,614,520	-		GFF2598	0.34	-0.4
2,614,520	-		GFF2598	0.34	-1.5
2,614,520	-		GFF2598	0.34	+0.1
2,614,520	-		GFF2598	0.34	-1.5
2,614,520	-		GFF2598	0.34	-1.2
2,614,522	+		GFF2598	0.34	+0.1
2,614,531	-		GFF2598	0.35	-1.2
2,614,543	-		GFF2598	0.36	-1.9
2,614,543	-		GFF2598	0.36	-1.9
2,614,557	+		GFF2598	0.37	+0.8
2,614,565	-		GFF2598	0.37	-0.9
2,614,568	+		GFF2598	0.37	-0.9
2,614,573	+		GFF2598	0.38	-1.8
2,614,576	-		GFF2598	0.38	-1.4
2,614,578	+		GFF2598	0.38	+0.2
2,614,588	-		GFF2598	0.39	-1.9
2,614,623	-		GFF2598	0.41	+0.3
2,614,637	+		GFF2598	0.42	-0.9
2,614,638	-		GFF2598	0.42	-1.1