Strain Fitness in Sphingobium sp. HT1-2 around GFF2524

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,540,969	-				+0.2
2,540,969	-				-1.2
2,540,973	-				-0.0
2,540,975	+				+0.6
2,540,977	+				-1.3
2,540,985	+				+0.0
2,540,985	-				-0.2
2,540,985	-				-1.7
2,540,993	-				-1.3
2,540,995	+				-0.1
2,540,995	+				+0.3
2,540,995	+				-1.5
2,540,995	+				+0.7
2,541,003	-		GFF2523	0.10	-0.2
2,541,014	-		GFF2523	0.11	+0.5
2,541,041	+		GFF2523	0.14	-0.7
2,541,041	+		GFF2523	0.14	-0.6
2,541,041	+		GFF2523	0.14	-0.9
2,541,041	+		GFF2523	0.14	-0.9
2,541,041	+		GFF2523	0.14	-0.7
2,541,049	-		GFF2523	0.15	-1.6
2,541,049	-		GFF2523	0.15	+0.8
2,541,049	-		GFF2523	0.15	-0.6
2,541,049	-		GFF2523	0.15	-0.4
2,541,049	-		GFF2523	0.15	-1.5
2,541,049	-		GFF2523	0.15	-1.7
2,541,049	-		GFF2523	0.15	-1.4
2,541,071	-		GFF2523	0.17	+0.2
2,541,073	+		GFF2523	0.17	-1.4
2,541,127	+		GFF2523	0.22	-1.4
2,541,129	+		GFF2523	0.22	-1.7
2,541,131	+		GFF2523	0.23	+1.7
2,541,139	-		GFF2523	0.23	-0.9
2,541,182	-		GFF2523	0.27	+0.0
2,541,209	-		GFF2523	0.30	+0.7
2,541,462	+		GFF2523	0.54	+0.9
2,541,462	+		GFF2523	0.54	+0.8
2,541,462	+		GFF2523	0.54	+0.6
2,541,470	-		GFF2523	0.55	-0.9
2,541,470	-		GFF2523	0.55	-0.6
2,541,470	-		GFF2523	0.55	-2.7
2,541,504	+		GFF2523	0.58	+1.0
2,541,505	+		GFF2523	0.58	+0.4
2,541,513	-		GFF2523	0.59	-0.3
2,541,513	-		GFF2523	0.59	+0.1
2,541,513	-		GFF2523	0.59	-0.3
2,541,517	-		GFF2523	0.59	-0.3
2,541,518	-		GFF2523	0.60	+1.8
2,541,569	+		GFF2523	0.64	-0.5
2,541,572	-		GFF2523	0.65	-2.0
2,541,574	+		GFF2523	0.65	-0.3
2,541,574	+		GFF2523	0.65	-2.3
2,541,576	-		GFF2523	0.65	-0.4
2,541,577	-		GFF2523	0.65	+0.0
2,541,582	+		GFF2523	0.66	+0.3
2,541,582	-		GFF2523	0.66	-0.1
2,541,582	-		GFF2523	0.66	-0.7
2,541,582	-		GFF2523	0.66	-0.6
2,541,582	-		GFF2523	0.66	-1.4
2,541,600	-		GFF2523	0.67	-0.4
2,541,600	-		GFF2523	0.67	-1.3
2,541,610	-		GFF2523	0.68	+0.6
2,541,613	+		GFF2523	0.69	-0.1
2,541,613	+		GFF2523	0.69	-1.1
2,541,614	+		GFF2523	0.69	-0.5
2,541,621	-		GFF2523	0.69	+0.5
2,541,648	-		GFF2523	0.72	+0.3
2,541,650	+		GFF2523	0.72	-0.4
2,541,655	+		GFF2523	0.73	-0.4
2,541,663	-		GFF2523	0.73	-1.4
2,541,663	-		GFF2523	0.73	+0.7
2,541,663	-		GFF2523	0.73	+0.6
2,541,663	-		GFF2523	0.73	-0.9
2,541,679	+		GFF2523	0.75	-0.2
2,541,681	+		GFF2523	0.75	-0.1
2,541,689	-		GFF2523	0.76	-0.5
2,541,712	+		GFF2523	0.78	-0.9
2,541,712	+		GFF2523	0.78	-0.2
2,541,712	+		GFF2523	0.78	+1.4
2,541,720	-		GFF2523	0.79	-1.2
2,541,720	-		GFF2523	0.79	-0.6
2,541,720	-		GFF2523	0.79	-1.0
2,541,724	+		GFF2523	0.79	+0.3
2,541,730	+		GFF2523	0.80	+1.4
2,541,740	+		GFF2523	0.81	-1.0
2,541,743	+		GFF2523	0.81	-1.7
2,541,748	-		GFF2523	0.81	-0.7
2,541,756	+		GFF2523	0.82	+0.9
2,541,756	+		GFF2523	0.82	-0.7
2,541,764	+		GFF2523	0.83	-0.1
2,541,767	-		GFF2523	0.83	+0.3
2,541,772	-		GFF2523	0.84	+1.5
2,541,791	+		GFF2523	0.86	+0.0
2,541,791	+		GFF2523	0.86	+0.5
2,541,799	-		GFF2523	0.86	-0.4
2,541,799	-		GFF2523	0.86	-0.3
2,541,799	-		GFF2523	0.86	-0.1
2,541,828	+		GFF2523	0.89	+0.6
2,541,836	+		GFF2523	0.90	+0.1
2,541,836	-		GFF2523	0.90	+1.0
2,541,836	-		GFF2523	0.90	-0.7
2,541,836	-		GFF2523	0.90	-0.6
2,541,836	-		GFF2523	0.90	-0.6
2,541,836	-		GFF2523	0.90	-0.6
2,541,848	-				-1.2
2,541,858	-				-2.2
2,541,869	+				-1.3
2,541,874	-				-1.7
2,541,876	+				-1.4
2,541,884	-				+0.8
2,541,901	+				-0.7
2,541,901	+				+0.4
2,541,901	+				-2.2
2,541,901	+				+0.0
2,541,901	+				+0.3
2,541,909	-				+0.2
2,541,909	-				+0.3
2,541,909	-				-0.4
2,541,926	-				-1.3
2,541,936	+				-2.2
2,541,936	+				-0.5
2,541,948	-				-0.3
2,541,965	+				-1.2
2,541,965	+				-0.9
2,541,965	+				+0.1
2,541,965	+				+0.6
2,541,965	+				+0.1
2,541,965	+				-2.0
2,541,965	+				-1.0
2,541,965	+				+0.8
2,541,965	+				-0.1
2,541,965	+				+1.9
2,541,965	+				-0.6
2,541,965	+				-1.8
2,541,965	+				-0.1
2,541,965	+				-1.2
2,541,965	+				-0.2
2,541,965	+				-0.4
2,541,965	+				+0.4
2,541,965	+				+2.1
2,541,965	+				-2.2
2,541,965	+				-0.5
2,541,965	+				-2.7
2,541,973	-				-2.7
2,541,973	-				+0.4
2,541,973	-				-0.6
2,541,973	-				-0.3
2,541,973	-				-0.3
2,541,973	-				+1.4
2,541,973	-				-2.2
2,541,973	-				+0.0
2,541,973	-				+0.8
2,541,977	+				-1.6
2,541,977	+				-0.3
2,541,977	+				-1.3
2,541,977	+				-0.4
2,541,977	+				+0.2
2,541,977	+				-1.4
2,541,985	-				-1.2
2,541,985	-				+0.1
2,541,985	-				-0.3
2,541,985	-				+1.8
2,541,985	-				+0.7
2,541,987	+				+0.2
2,542,007	+		GFF2524	0.15	+1.8
2,542,008	+		GFF2524	0.16	-0.2
2,542,013	+		GFF2524	0.18	+0.3
2,542,013	+		GFF2524	0.18	+0.8
2,542,013	+		GFF2524	0.18	+0.0
2,542,013	+		GFF2524	0.18	+0.3
2,542,021	-		GFF2524	0.21	+0.6
2,542,023	+		GFF2524	0.22	+0.3
2,542,031	-		GFF2524	0.25	+0.4
2,542,048	-		GFF2524	0.32	+0.7
2,542,062	+		GFF2524	0.37	-0.4
2,542,062	+		GFF2524	0.37	-0.4
2,542,067	+		GFF2524	0.39	-0.6
2,542,067	+		GFF2524	0.39	-3.1
2,542,070	-		GFF2524	0.40	-0.3
2,542,075	-		GFF2524	0.42	-1.7
2,542,077	+		GFF2524	0.43	+0.8
2,542,077	+		GFF2524	0.43	-0.9
2,542,077	+		GFF2524	0.43	-0.6
2,542,077	+		GFF2524	0.43	-1.1
2,542,077	+		GFF2524	0.43	-1.0
2,542,081	+		GFF2524	0.45	-2.0
2,542,083	-		GFF2524	0.46	-0.0
2,542,083	-		GFF2524	0.46	-0.3
2,542,085	+		GFF2524	0.46	+0.0
2,542,085	+		GFF2524	0.46	+0.1
2,542,085	+		GFF2524	0.46	-1.7
2,542,085	+		GFF2524	0.46	-0.3
2,542,085	+		GFF2524	0.46	-1.2
2,542,085	+		GFF2524	0.46	-1.4
2,542,085	-		GFF2524	0.46	+0.2
2,542,085	-		GFF2524	0.46	-1.2
2,542,085	-		GFF2524	0.46	-0.3
2,542,085	-		GFF2524	0.46	+0.1
2,542,085	-		GFF2524	0.46	+0.4
2,542,085	-		GFF2524	0.46	+1.3
2,542,088	-		GFF2524	0.48	+0.5
2,542,088	-		GFF2524	0.48	-0.2
2,542,101	+		GFF2524	0.53	-0.4
2,542,101	+		GFF2524	0.53	-1.4
2,542,101	+		GFF2524	0.53	+0.2
2,542,109	-		GFF2524	0.56	-1.3
2,542,109	-		GFF2524	0.56	-2.0
2,542,125	+		GFF2524	0.62	-0.1
2,542,134	+		GFF2524	0.66	-2.2
2,542,134	+		GFF2524	0.66	+0.1
2,542,134	+		GFF2524	0.66	-0.6
2,542,134	+		GFF2524	0.66	-1.6
2,542,134	+		GFF2524	0.66	-1.0
2,542,134	+		GFF2524	0.66	+0.8
2,542,134	+		GFF2524	0.66	-0.9
2,542,134	+		GFF2524	0.66	+0.4
2,542,134	+		GFF2524	0.66	-0.7
2,542,134	+		GFF2524	0.66	-0.7
2,542,142	-		GFF2524	0.69	-1.8
2,542,142	-		GFF2524	0.69	+0.8
2,542,142	-		GFF2524	0.69	-1.3
2,542,147	-		GFF2524	0.71	-1.4
2,542,152	-		GFF2524	0.73	-2.7
2,542,179	+		GFF2524	0.84	+0.4
2,542,179	+		GFF2524	0.84	-1.2
2,542,187	-		GFF2524	0.87	+0.4
2,542,187	-		GFF2524	0.87	-1.2
2,542,189	+		GFF2524	0.88	+0.4
2,542,194	+				-0.5
2,542,195	+				-2.4
2,542,197	-				+1.1
2,542,205	+				-0.3
2,542,213	-				-0.2
2,542,213	-				-0.8
2,542,213	-				-0.0
2,542,236	+				-1.6
2,542,241	+				+0.1
2,542,277	-				+0.3
2,542,309	+				+0.2
2,542,312	-				+0.3
2,542,369	-				+0.4
2,542,371	+				-1.7
2,542,371	+				+1.0
2,542,371	+				-1.8
2,542,371	+				-2.7
2,542,371	+				+1.8
2,542,379	-				-0.8
2,542,379	-				-0.3
2,542,379	-				+0.4
2,542,379	-				+1.0
2,542,379	-				-0.2
2,542,379	-				+0.5
2,542,399	+				-0.3
2,542,407	+				-0.6
2,542,407	+				+0.4
2,542,407	+				+0.0
2,542,407	+				-2.3
2,542,407	+				-2.5
2,542,413	-				-0.5
2,542,415	-				+0.2
2,542,415	-				-0.3
2,542,415	-				-0.0
2,542,415	-				-0.6
2,542,415	-				-0.5
2,542,415	-				+0.0
2,542,415	-				+0.6
2,542,415	-				-1.7
2,542,436	-				-0.2
2,542,442	+				-2.4
2,542,442	+				+0.1
2,542,447	+				-0.2
2,542,460	-				-0.3
2,542,538	+				+0.3
2,542,541	+				+0.0
2,542,549	-		GFF2525	0.10	-0.7
2,542,549	-		GFF2525	0.10	-0.9
2,542,554	-		GFF2525	0.10	+1.3
2,542,568	+		GFF2525	0.11	-1.6
2,542,569	+		GFF2525	0.11	-0.5
2,542,569	+		GFF2525	0.11	-0.7
2,542,569	+		GFF2525	0.11	-1.1
2,542,569	+		GFF2525	0.11	+0.6
2,542,569	+		GFF2525	0.11	+0.7
2,542,569	+		GFF2525	0.11	-1.9
2,542,569	+		GFF2525	0.11	+1.0
2,542,569	+		GFF2525	0.11	+0.0
2,542,569	+		GFF2525	0.11	-1.3
2,542,572	-		GFF2525	0.11	-1.3
2,542,574	-		GFF2525	0.11	+0.3
2,542,577	-		GFF2525	0.11	+0.3
2,542,577	-		GFF2525	0.11	-0.7
2,542,577	-		GFF2525	0.11	-1.6
2,542,577	-		GFF2525	0.11	-1.8
2,542,577	-		GFF2525	0.11	-0.4
2,542,577	-		GFF2525	0.11	+1.3
2,542,577	-		GFF2525	0.11	-1.4
2,542,592	-		GFF2525	0.11	-2.1
2,542,592	-		GFF2525	0.11	-1.3
2,542,596	+		GFF2525	0.12	-0.1
2,542,601	+		GFF2525	0.12	+0.5
2,542,604	-		GFF2525	0.12	+1.1
2,542,609	-		GFF2525	0.12	-1.7
2,542,627	+		GFF2525	0.13	-2.7
2,542,632	+		GFF2525	0.13	+1.4
2,542,632	+		GFF2525	0.13	+1.4
2,542,643	-		GFF2525	0.13	-0.3
2,542,652	+		GFF2525	0.14	-1.1
2,542,661	-		GFF2525	0.14	-0.3
2,542,661	-		GFF2525	0.14	-1.7
2,542,673	-		GFF2525	0.14	-0.2
2,542,691	-		GFF2525	0.15	+1.1
2,542,691	-		GFF2525	0.15	-0.6
2,542,716	+		GFF2525	0.16	-1.6
2,542,716	+		GFF2525	0.16	-1.4
2,542,724	-		GFF2525	0.16	-1.4
2,542,726	+		GFF2525	0.16	-1.7
2,542,726	+		GFF2525	0.16	-0.1
2,542,726	+		GFF2525	0.16	+0.1
2,542,734	-		GFF2525	0.16	-1.9
2,542,734	-		GFF2525	0.16	+1.8
2,542,748	+		GFF2525	0.17	+0.8
2,542,756	-		GFF2525	0.17	-1.2
2,542,756	-		GFF2525	0.17	+0.4
2,542,762	-		GFF2525	0.17	-2.1
2,542,775	-		GFF2525	0.18	+0.0
2,542,779	+		GFF2525	0.18	-1.0
2,542,779	+		GFF2525	0.18	-0.7
2,542,784	+		GFF2525	0.18	+0.8
2,542,787	-		GFF2525	0.18	-0.6
2,542,789	+		GFF2525	0.18	-0.3
2,542,789	+		GFF2525	0.18	-1.2
2,542,792	-		GFF2525	0.18	-0.3
2,542,792	-		GFF2525	0.18	-0.4
2,542,797	-		GFF2525	0.19	+0.3
2,542,823	+		GFF2525	0.19	-0.2
2,542,831	+		GFF2525	0.20	-0.3
2,542,849	-		GFF2525	0.20	-0.7
2,542,867	+		GFF2525	0.21	-1.6
2,542,870	-		GFF2525	0.21	+0.3
2,542,870	-		GFF2525	0.21	+1.6
2,542,872	-		GFF2525	0.21	+1.1
2,542,875	+		GFF2525	0.21	+0.5
2,542,875	-		GFF2525	0.21	+0.1
2,542,883	-		GFF2525	0.22	+0.1
2,542,887	+		GFF2525	0.22	-0.8
2,542,887	+		GFF2525	0.22	-0.9
2,542,888	-		GFF2525	0.22	+0.1
2,542,901	+		GFF2525	0.22	-2.4
2,542,909	-		GFF2525	0.22	-0.4
2,542,956	+		GFF2525	0.24	+1.0
2,542,982	+		GFF2525	0.25	+0.3
2,542,992	-		GFF2525	0.25	+1.3
2,543,012	+		GFF2525	0.26	+0.3
2,543,020	-		GFF2525	0.26	+0.3
2,543,022	+		GFF2525	0.26	+0.4
2,543,067	-		GFF2525	0.28	-0.2
2,543,086	-		GFF2525	0.29	-0.2
2,543,095	+		GFF2525	0.29	-2.4
2,543,095	+		GFF2525	0.29	-0.7
2,543,095	+		GFF2525	0.29	+0.7
2,543,095	+		GFF2525	0.29	+0.3
2,543,095	+		GFF2525	0.29	-0.4
2,543,095	+		GFF2525	0.29	-2.8
2,543,095	+		GFF2525	0.29	+0.9
2,543,095	+		GFF2525	0.29	+0.5
2,543,095	+		GFF2525	0.29	-1.1
2,543,095	+		GFF2525	0.29	+1.1
2,543,095	+		GFF2525	0.29	-1.3
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