Strain Fitness in Sphingobium sp. HT1-2 around GFF1691

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,713,401	-		GFF1690	0.11	-0.5
1,713,401	-		GFF1690	0.11	-0.1
1,713,444	-		GFF1690	0.15	+0.5
1,713,468	-		GFF1690	0.17	+0.3
1,713,484	+		GFF1690	0.18	-0.3
1,713,508	-		GFF1690	0.20	+0.7
1,713,508	-		GFF1690	0.20	-0.9
1,713,517	+		GFF1690	0.21	+1.1
1,713,579	+		GFF1690	0.27	-1.3
1,713,579	+		GFF1690	0.27	+1.0
1,713,587	-		GFF1690	0.27	+1.0
1,713,594	-		GFF1690	0.28	-0.5
1,713,604	-		GFF1690	0.29	+0.0
1,713,615	-		GFF1690	0.30	-0.3
1,713,623	+		GFF1690	0.31	-1.6
1,713,646	+		GFF1690	0.33	+0.8
1,713,646	+		GFF1690	0.33	+0.1
1,713,646	+		GFF1690	0.33	+0.1
1,713,646	+		GFF1690	0.33	-1.2
1,713,653	+		GFF1690	0.33	+0.6
1,713,653	-		GFF1690	0.33	+0.7
1,713,654	-		GFF1690	0.33	-0.9
1,713,654	-		GFF1690	0.33	-1.2
1,713,654	-		GFF1690	0.33	+1.5
1,713,658	-		GFF1690	0.34	+1.4
1,713,659	-		GFF1690	0.34	-0.6
1,713,663	+		GFF1690	0.34	+0.8
1,713,663	+		GFF1690	0.34	-0.3
1,713,666	-		GFF1690	0.35	-1.0
1,713,671	-		GFF1690	0.35	+0.3
1,713,671	-		GFF1690	0.35	-0.8
1,713,671	-		GFF1690	0.35	-0.9
1,713,671	-		GFF1690	0.35	+0.4
1,713,671	-		GFF1690	0.35	+0.7
1,713,671	-		GFF1690	0.35	-2.4
1,713,671	-		GFF1690	0.35	-0.2
1,713,695	+		GFF1690	0.37	+0.6
1,713,719	+		GFF1690	0.39	-0.6
1,713,725	+		GFF1690	0.40	-0.3
1,713,725	+		GFF1690	0.40	-0.6
1,713,725	+		GFF1690	0.40	+0.8
1,713,733	-		GFF1690	0.41	-1.2
1,713,733	-		GFF1690	0.41	+0.4
1,713,735	+		GFF1690	0.41	+0.1
1,713,735	+		GFF1690	0.41	-0.1
1,713,743	-		GFF1690	0.41	-1.4
1,713,744	-		GFF1690	0.42	-2.9
1,713,765	+		GFF1690	0.43	+0.5
1,713,808	-		GFF1690	0.47	-0.4
1,713,810	-		GFF1690	0.47	+0.9
1,713,822	+		GFF1690	0.49	-0.6
1,713,836	-		GFF1690	0.50	-1.2
1,713,846	+		GFF1690	0.51	-1.0
1,713,869	+		GFF1690	0.53	+0.7
1,713,877	-		GFF1690	0.54	-2.1
1,713,898	-		GFF1690	0.55	-0.3
1,713,907	-		GFF1690	0.56	+0.8
1,713,996	+		GFF1690	0.64	-0.4
1,714,044	+		GFF1690	0.69	-0.3
1,714,069	+		GFF1690	0.71	+0.3
1,714,093	+		GFF1690	0.73	-0.1
1,714,110	-		GFF1690	0.75	-0.2
1,714,148	+		GFF1690	0.78	-0.3
1,714,148	+		GFF1690	0.78	-0.1
1,714,148	+		GFF1690	0.78	+0.1
1,714,148	+		GFF1690	0.78	-0.3
1,714,148	+		GFF1690	0.78	+0.4
1,714,148	+		GFF1690	0.78	-0.3
1,714,148	+		GFF1690	0.78	+0.0
1,714,148	+		GFF1690	0.78	-1.0
1,714,148	+		GFF1690	0.78	-1.4
1,714,148	+		GFF1690	0.78	+0.3
1,714,148	+		GFF1690	0.78	-1.6
1,714,148	+		GFF1690	0.78	+0.4
1,714,148	+		GFF1690	0.78	+0.4
1,714,148	+		GFF1690	0.78	+0.9
1,714,148	+		GFF1690	0.78	+0.3
1,714,148	+		GFF1690	0.78	+0.0
1,714,148	+		GFF1690	0.78	-0.2
1,714,148	+		GFF1690	0.78	+1.3
1,714,148	+		GFF1690	0.78	-1.7
1,714,148	+		GFF1690	0.78	+0.2
1,714,156	-		GFF1690	0.79	-0.6
1,714,156	-		GFF1690	0.79	-1.1
1,714,156	-		GFF1690	0.79	-0.1
1,714,156	-		GFF1690	0.79	+0.6
1,714,156	-		GFF1690	0.79	-0.1
1,714,156	-		GFF1690	0.79	-1.0
1,714,156	-		GFF1690	0.79	+0.1
1,714,156	-		GFF1690	0.79	+0.7
1,714,156	-		GFF1690	0.79	+1.0
1,714,156	-		GFF1690	0.79	-0.1
1,714,156	-		GFF1690	0.79	+0.7
1,714,156	-		GFF1690	0.79	+1.4
1,714,156	-		GFF1690	0.79	-1.7
1,714,156	-		GFF1690	0.79	+1.2
1,714,156	-		GFF1690	0.79	-0.6
1,714,156	-		GFF1690	0.79	-0.1
1,714,156	-		GFF1690	0.79	-1.2
1,714,156	-		GFF1690	0.79	+0.1
1,714,156	-		GFF1690	0.79	-0.3
1,714,156	-		GFF1690	0.79	-0.3
1,714,156	-		GFF1690	0.79	+0.3
1,714,156	-		GFF1690	0.79	-0.6
1,714,156	-		GFF1690	0.79	-1.5
1,714,156	-		GFF1690	0.79	+0.1
1,714,156	-		GFF1690	0.79	-0.2
1,714,156	-		GFF1690	0.79	-0.3
1,714,156	-		GFF1690	0.79	+0.3
1,714,161	+		GFF1690	0.79	-0.7
1,714,180	+		GFF1690	0.81	+0.1
1,714,186	+		GFF1690	0.81	-3.0
1,714,188	-		GFF1690	0.82	-1.2
1,714,194	-		GFF1690	0.82	+1.3
1,714,194	-		GFF1690	0.82	+1.3
1,714,194	-		GFF1690	0.82	-0.6
1,714,197	+		GFF1690	0.82	-0.7
1,714,200	+		GFF1690	0.83	-1.7
1,714,200	+		GFF1690	0.83	-0.5
1,714,200	-		GFF1690	0.83	+0.7
1,714,200	-		GFF1690	0.83	-0.9
1,714,210	-		GFF1690	0.84	+1.2
1,714,258	+		GFF1690	0.88	-0.2
1,714,306	+				-0.8
1,714,388	+				-0.3
1,714,396	-				-0.4
1,714,440	+				+0.7
1,714,487	+		GFF1691	0.12	-2.0
1,714,487	+		GFF1691	0.12	-2.1
1,714,487	+		GFF1691	0.12	+0.2
1,714,487	+		GFF1691	0.12	-1.2
1,714,487	+		GFF1691	0.12	+0.4
1,714,487	+		GFF1691	0.12	-0.4
1,714,495	+		GFF1691	0.13	-0.9
1,714,495	-		GFF1691	0.13	-0.1
1,714,495	-		GFF1691	0.13	-0.6
1,714,495	-		GFF1691	0.13	+0.7
1,714,495	-		GFF1691	0.13	+0.8
1,714,515	+		GFF1691	0.16	-0.1
1,714,520	+		GFF1691	0.16	-0.5
1,714,522	+		GFF1691	0.17	+0.7
1,714,523	-		GFF1691	0.17	+0.3
1,714,527	+		GFF1691	0.17	+1.0
1,714,535	+		GFF1691	0.18	-0.1
1,714,535	+		GFF1691	0.18	-0.6
1,714,535	+		GFF1691	0.18	-1.5
1,714,535	+		GFF1691	0.18	-1.8
1,714,535	-		GFF1691	0.18	-0.0
1,714,540	+		GFF1691	0.19	+0.5
1,714,540	+		GFF1691	0.19	-0.2
1,714,540	+		GFF1691	0.19	-0.4
1,714,543	-		GFF1691	0.19	+0.3
1,714,543	-		GFF1691	0.19	-0.3
1,714,543	-		GFF1691	0.19	+0.5
1,714,543	-		GFF1691	0.19	+1.0
1,714,543	-		GFF1691	0.19	-2.6
1,714,548	-		GFF1691	0.20	+0.1
1,714,548	-		GFF1691	0.20	+0.4
1,714,548	-		GFF1691	0.20	-0.5
1,714,556	+		GFF1691	0.21	-0.9
1,714,569	-		GFF1691	0.23	+1.0
1,714,598	-		GFF1691	0.27	+0.5
1,714,700	+		GFF1691	0.40	+1.6
1,714,700	+		GFF1691	0.40	+0.0
1,714,708	-		GFF1691	0.41	-0.8
1,714,722	+		GFF1691	0.43	-1.0
1,714,722	+		GFF1691	0.43	+0.4
1,714,722	+		GFF1691	0.43	-0.1
1,714,722	+		GFF1691	0.43	+0.5
1,714,722	+		GFF1691	0.43	-1.0
1,714,722	+		GFF1691	0.43	-2.7
1,714,722	+		GFF1691	0.43	-0.6
1,714,730	-		GFF1691	0.44	+0.4
1,714,730	-		GFF1691	0.44	-0.2
1,714,730	-		GFF1691	0.44	-0.1
1,714,730	-		GFF1691	0.44	-0.2
1,714,730	-		GFF1691	0.44	+1.3
1,714,730	-		GFF1691	0.44	-0.2
1,714,730	-		GFF1691	0.44	-0.4
1,714,753	-		GFF1691	0.47	-0.1
1,714,796	-		GFF1691	0.53	-1.4
1,714,799	+		GFF1691	0.53	-1.1
1,714,807	-		GFF1691	0.55	-0.7
1,714,836	+		GFF1691	0.58	+1.0
1,714,844	-		GFF1691	0.59	+1.0
1,714,846	+		GFF1691	0.60	-0.4
1,714,846	+		GFF1691	0.60	-0.1
1,714,846	+		GFF1691	0.60	-0.4
1,714,846	+		GFF1691	0.60	-0.5
1,714,846	+		GFF1691	0.60	+0.3
1,714,846	+		GFF1691	0.60	-1.3
1,714,846	+		GFF1691	0.60	-1.6
1,714,846	+		GFF1691	0.60	+0.1
1,714,846	+		GFF1691	0.60	-1.3
1,714,846	+		GFF1691	0.60	+0.1
1,714,846	+		GFF1691	0.60	+0.6
1,714,846	+		GFF1691	0.60	-0.5
1,714,846	+		GFF1691	0.60	+0.1
1,714,854	-		GFF1691	0.61	-0.9
1,714,854	-		GFF1691	0.61	+0.4
1,714,854	-		GFF1691	0.61	+0.1
1,714,854	-		GFF1691	0.61	+0.5
1,714,854	-		GFF1691	0.61	-1.1
1,714,854	-		GFF1691	0.61	-0.1
1,714,854	-		GFF1691	0.61	+0.8
1,714,854	-		GFF1691	0.61	-0.3
1,714,854	-		GFF1691	0.61	-0.5
1,714,854	-		GFF1691	0.61	-0.3
1,714,862	+		GFF1691	0.62	+0.0
1,714,867	+		GFF1691	0.63	+0.9
1,714,886	+		GFF1691	0.65	-0.3
1,714,894	-		GFF1691	0.66	+1.3
1,714,904	-		GFF1691	0.67	-1.1
1,714,906	-		GFF1691	0.68	-0.4
1,714,924	-		GFF1691	0.70	+1.3
1,714,957	+		GFF1691	0.75	-0.5
1,714,957	-		GFF1691	0.75	-0.3
1,714,986	-		GFF1691	0.78	+1.7
1,715,032	+		GFF1691	0.85	-0.5
1,715,050	-		GFF1691	0.87	+0.7
1,715,065	+		GFF1691	0.89	+0.3
1,715,091	-				-0.3
1,715,108	+				+0.2
1,715,111	-				+0.2
1,715,111	-				-0.2
1,715,112	+				-2.1
1,715,120	-				+0.7
1,715,129	+				-1.0
1,715,129	+				+0.2
1,715,129	+				-0.2
1,715,137	-				-1.7
1,715,137	-				+1.3
1,715,137	-				-0.5
1,715,137	-				+0.8
1,715,137	-				-1.5
1,715,194	+				-0.3
1,715,194	+				-1.4
1,715,204	+				-0.2
1,715,204	+				+1.3
1,715,204	+				-0.9
1,715,204	+				+0.2
1,715,204	+				-1.0
1,715,212	-				+0.1
1,715,212	-				-2.1
1,715,224	+				+1.0
1,715,224	+				+0.3
1,715,224	+				-0.7
1,715,224	+				+0.9
1,715,224	+				+0.1
1,715,224	+				-0.7
1,715,224	+				+0.3
1,715,224	+				-0.2
1,715,224	+				+0.7
1,715,224	+				-1.6
1,715,224	+				+0.9
1,715,224	+				-0.9
1,715,224	+				-1.4
1,715,224	+				+0.7
1,715,224	+				+0.7
1,715,224	+				-0.3
1,715,232	+				+0.3
1,715,232	-				+0.1
1,715,232	-				-1.4
1,715,232	-				-0.5
1,715,232	-				-0.2
1,715,232	-				-0.7
1,715,232	-				+0.2
1,715,232	-				+0.6
1,715,232	-				-0.2
1,715,232	-				+0.3
1,715,232	-				+0.4
1,715,232	-				-0.9
1,715,232	-				+0.3
1,715,232	-				-0.2
1,715,232	-				-0.3
1,715,232	-				+1.9
1,715,232	-				-0.2
1,715,273	+				+0.9
1,715,273	+				+0.0
1,715,273	+				+0.7
1,715,273	+				-1.4
1,715,281	-				-0.1
1,715,281	-				-2.3
1,715,281	-				-0.3
1,715,281	-				+0.3
1,715,324	+				+0.9
1,715,333	-				-0.3
1,715,354	+		GFF1692	0.12	-2.2
1,715,402	+		GFF1692	0.15	-2.4
1,715,403	+		GFF1692	0.15	-2.0
1,715,423	+		GFF1692	0.17	+0.2
1,715,436	-		GFF1692	0.18	-1.4
1,715,468	+		GFF1692	0.20	-0.3
1,715,468	+		GFF1692	0.20	-0.3
1,715,473	+		GFF1692	0.21	-1.5
1,715,487	+		GFF1692	0.22	-0.5
1,715,489	+		GFF1692	0.22	-0.1
1,715,505	+		GFF1692	0.23	-0.3
1,715,552	-		GFF1692	0.27	+0.4
1,715,559	+		GFF1692	0.27	+0.7
1,715,567	-		GFF1692	0.28	-0.7
1,715,571	-		GFF1692	0.28	-0.4
1,715,578	-		GFF1692	0.29	+1.1
1,715,583	-		GFF1692	0.29	-0.3
1,715,591	+		GFF1692	0.30	-0.2
1,715,591	+		GFF1692	0.30	+0.2
1,715,591	+		GFF1692	0.30	+0.4
1,715,599	-		GFF1692	0.30	-0.9
1,715,599	-		GFF1692	0.30	-0.2
1,715,621	+		GFF1692	0.32	+0.7
1,715,624	+		GFF1692	0.32	-1.1
1,715,626	+		GFF1692	0.32	+0.3
1,715,629	-		GFF1692	0.33	+0.4
1,715,629	-		GFF1692	0.33	+1.3
1,715,634	-		GFF1692	0.33	-0.0
1,715,634	-		GFF1692	0.33	+0.5
1,715,634	-		GFF1692	0.33	+1.3
1,715,675	+		GFF1692	0.36	+0.1
1,715,685	+		GFF1692	0.37	+0.5
1,715,690	+		GFF1692	0.37	+0.0
1,715,692	+		GFF1692	0.37	-0.9
1,715,692	+		GFF1692	0.37	-1.1
1,715,722	+		GFF1692	0.40	-0.9
1,715,730	-		GFF1692	0.40	+1.0
1,715,768	+		GFF1692	0.43	-0.2
1,715,768	+		GFF1692	0.43	-0.2
1,715,776	-		GFF1692	0.44	-2.3
1,715,776	-		GFF1692	0.44	-0.7
1,715,786	-		GFF1692	0.45	+1.6
1,715,790	+		GFF1692	0.45	+0.7
1,715,795	+		GFF1692	0.45	+1.8
1,715,795	+		GFF1692	0.45	+0.3
1,715,798	-		GFF1692	0.46	-0.1
1,715,803	-		GFF1692	0.46	+0.2
1,715,807	-		GFF1692	0.46	+0.6
1,715,832	-		GFF1692	0.48	-0.6
1,715,886	+		GFF1692	0.52	-0.9
1,715,887	+		GFF1692	0.52	-1.3
1,715,894	-		GFF1692	0.53	-2.8
1,715,948	+		GFF1692	0.57	+1.1
1,715,956	-		GFF1692	0.58	-1.2
1,716,002	+		GFF1692	0.61	-1.4
1,716,002	+		GFF1692	0.61	-0.2
1,716,002	+		GFF1692	0.61	+1.2
1,716,002	+		GFF1692	0.61	+0.2
1,716,010	-		GFF1692	0.62	+1.0
1,716,010	-		GFF1692	0.62	+1.3
1,716,010	-		GFF1692	0.62	-0.1
1,716,010	-		GFF1692	0.62	+0.6
1,716,010	-		GFF1692	0.62	+0.2
1,716,010	-		GFF1692	0.62	+0.8
1,716,012	+		GFF1692	0.62	-1.1
1,716,020	-		GFF1692	0.63	+1.5
1,716,026	+		GFF1692	0.63	-0.3
1,716,036	+		GFF1692	0.64	+0.8
1,716,036	+		GFF1692	0.64	-1.3
1,716,036	+		GFF1692	0.64	-0.9
1,716,036	+		GFF1692	0.64	-1.0
1,716,043	+		GFF1692	0.64	+1.2
1,716,043	+		GFF1692	0.64	-0.6
1,716,043	+		GFF1692	0.64	-0.8
1,716,043	+		GFF1692	0.64	+0.7
1,716,044	-		GFF1692	0.64	+1.0
1,716,044	-		GFF1692	0.64	+1.2
1,716,051	-		GFF1692	0.65	+0.3
1,716,051	-		GFF1692	0.65	+0.5
1,716,051	-		GFF1692	0.65	+0.3
1,716,062	-		GFF1692	0.66	+0.4
1,716,080	+		GFF1692	0.67	-0.7
1,716,080	+		GFF1692	0.67	-0.6
1,716,096	-		GFF1692	0.68	-0.5
1,716,096	-		GFF1692	0.68	-0.5
1,716,107	+		GFF1692	0.69	-0.6
1,716,114	+		GFF1692	0.70	-0.1
1,716,114	+		GFF1692	0.70	-2.3
1,716,114	+		GFF1692	0.70	-0.1
1,716,114	+		GFF1692	0.70	+1.0
1,716,122	-		GFF1692	0.70	+0.2
1,716,137	+		GFF1692	0.72	+0.5