Strain Fitness in Sphingobium sp. HT1-2 around GFF1673

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,700,126	-				-2.0
1,700,144	-				-0.3
1,700,169	-				-0.6
1,700,226	-				+1.6
1,700,283	-		GFF1672	0.16	-1.8
1,700,286	+		GFF1672	0.16	-1.4
1,700,286	+		GFF1672	0.16	-2.1
1,700,286	+		GFF1672	0.16	-0.3
1,700,288	-		GFF1672	0.16	+0.3
1,700,288	-		GFF1672	0.16	+1.6
1,700,288	-		GFF1672	0.16	-1.3
1,700,294	-		GFF1672	0.17	-0.1
1,700,294	-		GFF1672	0.17	-2.3
1,700,328	+		GFF1672	0.23	-0.7
1,700,341	-		GFF1672	0.25	-0.5
1,700,346	+		GFF1672	0.26	+1.5
1,700,350	+		GFF1672	0.27	-0.9
1,700,354	-		GFF1672	0.28	-0.2
1,700,385	-		GFF1672	0.33	-0.5
1,700,420	-		GFF1672	0.39	+0.9
1,700,441	+		GFF1672	0.43	-0.8
1,700,446	+		GFF1672	0.43	-2.2
1,700,460	+		GFF1672	0.46	+0.7
1,700,462	+		GFF1672	0.46	-0.5
1,700,470	-		GFF1672	0.48	-0.9
1,700,474	+		GFF1672	0.48	+0.7
1,700,484	-		GFF1672	0.50	-2.3
1,700,489	-		GFF1672	0.51	-1.0
1,700,490	+		GFF1672	0.51	+0.1
1,700,495	+		GFF1672	0.52	-0.1
1,700,498	-		GFF1672	0.52	+1.0
1,700,498	-		GFF1672	0.52	-2.0
1,700,504	+		GFF1672	0.53	-1.2
1,700,508	-		GFF1672	0.54	+0.7
1,700,508	-		GFF1672	0.54	+0.9
1,700,512	-		GFF1672	0.55	+0.3
1,700,512	-		GFF1672	0.55	-0.7
1,700,517	-		GFF1672	0.56	-0.4
1,700,527	-		GFF1672	0.57	+0.7
1,700,527	-		GFF1672	0.57	+0.7
1,700,528	-		GFF1672	0.57	+1.0
1,700,533	-		GFF1672	0.58	-1.1
1,700,537	-		GFF1672	0.59	-0.1
1,700,552	-		GFF1672	0.62	-0.5
1,700,566	+		GFF1672	0.64	+0.3
1,700,574	-		GFF1672	0.65	-0.4
1,700,599	+		GFF1672	0.70	-0.2
1,700,599	+		GFF1672	0.70	-1.1
1,700,599	+		GFF1672	0.70	-0.3
1,700,600	+		GFF1672	0.70	+0.1
1,700,600	+		GFF1672	0.70	-0.0
1,700,608	-		GFF1672	0.71	-1.1
1,700,623	+		GFF1672	0.74	-1.9
1,700,623	+		GFF1672	0.74	-0.9
1,700,623	+		GFF1672	0.74	+2.0
1,700,623	+		GFF1672	0.74	-1.4
1,700,623	+		GFF1672	0.74	-0.8
1,700,623	+		GFF1672	0.74	-0.5
1,700,623	+		GFF1672	0.74	+0.1
1,700,631	-		GFF1672	0.75	-0.2
1,700,631	-		GFF1672	0.75	+0.5
1,700,637	-		GFF1672	0.76	+0.3
1,700,644	+		GFF1672	0.77	+1.2
1,700,646	+		GFF1672	0.78	+0.4
1,700,646	+		GFF1672	0.78	+0.4
1,700,646	+		GFF1672	0.78	+1.4
1,700,646	+		GFF1672	0.78	-0.6
1,700,646	+		GFF1672	0.78	-0.5
1,700,646	+		GFF1672	0.78	-0.8
1,700,646	+		GFF1672	0.78	+0.4
1,700,646	+		GFF1672	0.78	-0.8
1,700,646	+		GFF1672	0.78	-1.4
1,700,646	+		GFF1672	0.78	-0.7
1,700,646	+		GFF1672	0.78	+0.8
1,700,646	+		GFF1672	0.78	-0.3
1,700,646	+		GFF1672	0.78	-0.5
1,700,646	+		GFF1672	0.78	-1.3
1,700,646	+		GFF1672	0.78	-0.2
1,700,646	+		GFF1672	0.78	+1.0
1,700,646	+		GFF1672	0.78	-1.2
1,700,646	+		GFF1672	0.78	-1.9
1,700,646	+		GFF1672	0.78	-0.7
1,700,646	+		GFF1672	0.78	+1.3
1,700,646	+		GFF1672	0.78	-0.2
1,700,646	+		GFF1672	0.78	-0.1
1,700,646	+		GFF1672	0.78	-2.0
1,700,646	+		GFF1672	0.78	+0.5
1,700,646	+		GFF1672	0.78	+0.2
1,700,646	+		GFF1672	0.78	-0.5
1,700,646	+		GFF1672	0.78	-0.2
1,700,646	+		GFF1672	0.78	-0.2
1,700,646	+		GFF1672	0.78	-0.5
1,700,646	+		GFF1672	0.78	-0.6
1,700,646	+		GFF1672	0.78	+0.8
1,700,646	+		GFF1672	0.78	-0.5
1,700,646	+		GFF1672	0.78	-1.1
1,700,646	+		GFF1672	0.78	+0.7
1,700,646	+		GFF1672	0.78	+1.4
1,700,646	+		GFF1672	0.78	+0.4
1,700,646	+		GFF1672	0.78	-1.7
1,700,646	+		GFF1672	0.78	-0.3
1,700,646	+		GFF1672	0.78	+0.0
1,700,646	+		GFF1672	0.78	-0.5
1,700,646	+		GFF1672	0.78	-0.6
1,700,646	+		GFF1672	0.78	-0.1
1,700,654	-		GFF1672	0.79	+1.0
1,700,654	-		GFF1672	0.79	-0.6
1,700,654	-		GFF1672	0.79	+1.0
1,700,654	-		GFF1672	0.79	+0.0
1,700,654	-		GFF1672	0.79	-0.1
1,700,654	-		GFF1672	0.79	+0.7
1,700,654	-		GFF1672	0.79	-0.6
1,700,654	-		GFF1672	0.79	+0.7
1,700,654	-		GFF1672	0.79	+0.2
1,700,654	-		GFF1672	0.79	+0.4
1,700,654	-		GFF1672	0.79	+0.8
1,700,654	-		GFF1672	0.79	+1.5
1,700,654	-		GFF1672	0.79	+0.3
1,700,654	-		GFF1672	0.79	+0.7
1,700,654	-		GFF1672	0.79	+1.5
1,700,654	-		GFF1672	0.79	+0.9
1,700,654	-		GFF1672	0.79	-0.5
1,700,654	-		GFF1672	0.79	+0.7
1,700,654	-		GFF1672	0.79	+1.7
1,700,654	-		GFF1672	0.79	-0.3
1,700,654	-		GFF1672	0.79	-1.1
1,700,654	-		GFF1672	0.79	-1.5
1,700,654	-		GFF1672	0.79	-0.7
1,700,654	-		GFF1672	0.79	-0.8
1,700,654	-		GFF1672	0.79	-1.5
1,700,654	-		GFF1672	0.79	-2.4
1,700,654	-		GFF1672	0.79	+2.0
1,700,654	-		GFF1672	0.79	-1.0
1,700,654	-		GFF1672	0.79	-0.7
1,700,654	-		GFF1672	0.79	-0.4
1,700,654	-		GFF1672	0.79	+0.8
1,700,654	-		GFF1672	0.79	+1.1
1,700,654	-		GFF1672	0.79	+0.9
1,700,654	-		GFF1672	0.79	-0.3
1,700,654	-		GFF1672	0.79	-1.7
1,700,654	-		GFF1672	0.79	+0.8
1,700,654	-		GFF1672	0.79	-2.0
1,700,654	-		GFF1672	0.79	-0.7
1,700,654	-		GFF1672	0.79	+0.4
1,700,654	-		GFF1672	0.79	+0.1
1,700,654	-		GFF1672	0.79	+1.8
1,700,654	-		GFF1672	0.79	+0.1
1,700,654	-		GFF1672	0.79	-2.0
1,700,654	-		GFF1672	0.79	-1.9
1,700,654	-		GFF1672	0.79	+0.6
1,700,666	+		GFF1672	0.81	-2.1
1,700,668	+		GFF1672	0.81	-0.6
1,700,713	+		GFF1672	0.89	-0.7
1,700,718	+				+0.6
1,700,718	+				-0.9
1,700,726	-				+0.4
1,700,726	-				-1.8
1,700,726	-				+0.3
1,700,726	-				-0.6
1,700,726	-				+0.6
1,700,726	-				+0.4
1,700,726	-				+0.8
1,700,728	-				-1.5
1,700,736	-				+0.5
1,700,737	-				+1.0
1,700,743	-				-0.5
1,700,772	+				+0.8
1,700,772	+				-0.4
1,700,782	+				+1.4
1,700,784	+				-1.3
1,700,784	+				+0.3
1,700,789	-				-0.2
1,700,805	+				+0.5
1,700,805	+				-0.5
1,700,805	+				+2.4
1,700,805	+				+0.7
1,700,806	+				-1.5
1,700,813	-				-1.7
1,700,813	-				-0.7
1,700,813	-				+0.4
1,700,879	+				-1.0
1,700,879	+				-0.4
1,700,887	-				+0.5
1,700,909	-				-2.0
1,700,924	-				-0.1
1,700,959	-				-1.1
1,700,986	-				+0.4
1,701,007	+				-0.9
1,701,017	-				+0.8
1,701,017	-				+1.8
1,701,025	+				-0.3
1,701,033	+				-0.2
1,701,033	+				+0.8
1,701,041	-				-0.1
1,701,057	-		GFF1673	0.14	+0.7
1,701,073	+		GFF1673	0.20	-2.5
1,701,074	+		GFF1673	0.21	-0.2
1,701,081	-		GFF1673	0.23	-0.9
1,701,112	-		GFF1673	0.34	-0.4
1,701,121	+		GFF1673	0.38	-1.3
1,701,121	+		GFF1673	0.38	-2.7
1,701,121	+		GFF1673	0.38	-1.7
1,701,122	-		GFF1673	0.38	-1.9
1,701,123	-		GFF1673	0.38	+0.7
1,701,123	-		GFF1673	0.38	-0.8
1,701,129	-		GFF1673	0.41	+0.8
1,701,129	-		GFF1673	0.41	-1.4
1,701,169	+		GFF1673	0.55	-2.1
1,701,175	+		GFF1673	0.58	-0.7
1,701,175	+		GFF1673	0.58	+0.1
1,701,239	+		GFF1673	0.81	-1.4
1,701,243	-		GFF1673	0.82	-1.2
1,701,247	+		GFF1673	0.84	-1.1
1,701,270	+				-0.8
1,701,275	+				-2.1
1,701,278	-				-0.7
1,701,282	-				+0.3
1,701,290	+				-0.4
1,701,293	+				+0.4
1,701,298	-				+0.4
1,701,315	+				-0.2
1,701,361	+				+0.6
1,701,374	+				-1.0
1,701,380	+				-1.2
1,701,380	-				+0.2
1,701,434	-				+0.4
1,701,448	+				+1.1
1,701,468	-				+1.0
1,701,469	-				-0.4
1,701,483	+				-1.2
1,701,483	+				-1.4
1,701,491	-				+0.6
1,701,491	-				+0.0
1,701,493	+				-1.5
1,701,493	+				+0.1
1,701,493	+				-0.2
1,701,493	+				+1.0
1,701,493	+				+0.5
1,701,493	+				-0.7
1,701,493	+				+0.5
1,701,493	+				+0.5
1,701,501	-				-0.1
1,701,501	-				-0.7
1,701,501	-				+0.3
1,701,501	-				+0.4
1,701,501	-				-0.7
1,701,501	-				-0.9
1,701,506	-				+0.4
1,701,506	-				-0.2
1,701,526	+				-2.3
1,701,526	+				-1.5
1,701,526	+				-1.2
1,701,534	-				-0.9
1,701,534	-				-1.4
1,701,544	+				+1.6
1,701,549	+				+0.5
1,701,549	+				-0.5
1,701,564	+				+0.5
1,701,564	+				-0.5
1,701,564	+				-0.1