Strain Fitness in Sphingobium sp. HT1-2 around GFF1526

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,554,322	+		GFF1525	0.30	-1.5
1,554,322	+		GFF1525	0.30	-0.2
1,554,322	+		GFF1525	0.30	-0.1
1,554,322	+		GFF1525	0.30	+0.0
1,554,334	-		GFF1525	0.31	-0.3
1,554,348	-		GFF1525	0.32	+0.1
1,554,349	-		GFF1525	0.32	-2.0
1,554,359	+		GFF1525	0.33	+0.7
1,554,371	+		GFF1525	0.34	+0.4
1,554,374	-		GFF1525	0.34	+0.3
1,554,379	-		GFF1525	0.35	+0.5
1,554,379	-		GFF1525	0.35	-2.2
1,554,379	-		GFF1525	0.35	+0.4
1,554,411	-		GFF1525	0.37	+0.1
1,554,422	-		GFF1525	0.38	-0.1
1,554,439	+		GFF1525	0.39	+1.1
1,554,439	+		GFF1525	0.39	+0.7
1,554,439	+		GFF1525	0.39	-0.2
1,554,439	+		GFF1525	0.39	-0.5
1,554,447	-		GFF1525	0.40	-0.6
1,554,447	-		GFF1525	0.40	-0.1
1,554,452	-		GFF1525	0.40	+0.3
1,554,520	-		GFF1525	0.46	-0.7
1,554,527	-		GFF1525	0.46	-0.8
1,554,547	+		GFF1525	0.48	+1.6
1,554,552	+		GFF1525	0.48	-0.8
1,554,555	-		GFF1525	0.48	+0.4
1,554,560	-		GFF1525	0.49	-1.5
1,554,570	+		GFF1525	0.49	+1.4
1,554,570	+		GFF1525	0.49	+0.3
1,554,570	-		GFF1525	0.49	-0.7
1,554,570	-		GFF1525	0.49	+1.6
1,554,580	+		GFF1525	0.50	+0.4
1,554,580	+		GFF1525	0.50	+0.6
1,554,588	-		GFF1525	0.51	+0.7
1,554,591	+		GFF1525	0.51	+0.2
1,554,599	-		GFF1525	0.52	-0.5
1,554,637	+		GFF1525	0.55	+0.9
1,554,673	+		GFF1525	0.57	+0.6
1,554,686	-		GFF1525	0.58	-1.7
1,554,686	-		GFF1525	0.58	+0.4
1,554,707	+		GFF1525	0.60	+0.3
1,554,712	+		GFF1525	0.60	+0.1
1,554,712	+		GFF1525	0.60	+0.4
1,554,715	-		GFF1525	0.61	+1.3
1,554,720	-		GFF1525	0.61	+0.1
1,554,728	-		GFF1525	0.62	-1.0
1,554,729	+		GFF1525	0.62	-1.0
1,554,730	-		GFF1525	0.62	-1.7
1,554,730	-		GFF1525	0.62	+1.5
1,554,739	+		GFF1525	0.63	+1.1
1,554,744	+		GFF1525	0.63	+0.0
1,554,787	+		GFF1525	0.66	-0.3
1,554,787	+		GFF1525	0.66	+0.2
1,554,795	-		GFF1525	0.67	-0.5
1,554,795	-		GFF1525	0.67	-0.9
1,554,816	-		GFF1525	0.68	-0.5
1,554,821	-		GFF1525	0.69	-0.7
1,554,882	-		GFF1525	0.74	+0.2
1,554,889	+		GFF1525	0.74	-0.8
1,554,898	-		GFF1525	0.75	-0.0
1,554,898	-		GFF1525	0.75	-1.8
1,554,915	+		GFF1525	0.76	-2.7
1,554,963	+		GFF1525	0.80	-0.6
1,554,973	-		GFF1525	0.81	+2.2
1,554,981	+		GFF1525	0.81	-0.3
1,554,986	+		GFF1525	0.82	-2.6
1,554,986	+		GFF1525	0.82	-0.8
1,554,986	+		GFF1525	0.82	-0.6
1,554,989	-		GFF1525	0.82	-1.8
1,555,021	-		GFF1525	0.84	-0.7
1,555,021	-		GFF1525	0.84	+0.8
1,555,045	+		GFF1525	0.86	-1.5
1,555,045	+		GFF1525	0.86	-0.3
1,555,045	+		GFF1525	0.86	+0.3
1,555,045	+		GFF1525	0.86	+0.7
1,555,045	+		GFF1525	0.86	-1.0
1,555,045	+		GFF1525	0.86	-1.7
1,555,045	+		GFF1525	0.86	-1.4
1,555,045	+		GFF1525	0.86	+0.1
1,555,045	+		GFF1525	0.86	-0.1
1,555,045	+		GFF1525	0.86	-0.4
1,555,050	+		GFF1525	0.86	-0.3
1,555,053	-		GFF1525	0.87	-1.9
1,555,053	-		GFF1525	0.87	-1.1
1,555,053	-		GFF1525	0.87	+0.2
1,555,053	-		GFF1525	0.87	-0.8
1,555,053	-		GFF1525	0.87	+1.3
1,555,053	-		GFF1525	0.87	-1.1
1,555,053	-		GFF1525	0.87	-0.3
1,555,053	-		GFF1525	0.87	+1.1
1,555,053	-		GFF1525	0.87	-3.1
1,555,053	-		GFF1525	0.87	+0.1
1,555,053	-		GFF1525	0.87	+0.1
1,555,053	-		GFF1525	0.87	-0.3
1,555,063	-		GFF1525	0.87	-0.2
1,555,067	-		GFF1525	0.88	+0.5
1,555,068	+		GFF1525	0.88	+1.0
1,555,068	-		GFF1525	0.88	+0.3
1,555,076	-		GFF1525	0.88	+0.8
1,555,086	-		GFF1525	0.89	+1.5
1,555,147	-				-0.7
1,555,173	+				+1.6
1,555,190	+				-0.9
1,555,190	+				+0.4
1,555,190	+				-1.2
1,555,198	-				+0.7
1,555,198	-				+0.0
1,555,198	-				-0.9
1,555,198	-				+0.0
1,555,198	-				-0.3
1,555,198	-				+0.8
1,555,200	+				-1.4
1,555,215	-				-0.2
1,555,215	-				-1.6
1,555,220	+				-0.9
1,555,238	-				-1.7
1,555,238	-				+1.1
1,555,243	+				+0.1
1,555,243	+				-1.2
1,555,253	-				-0.3
1,555,253	-				-2.1
1,555,284	-				+0.2
1,555,294	+				-1.0
1,555,294	+				+1.1
1,555,294	+				+1.6
1,555,294	+				+0.5
1,555,316	+				-0.5
1,555,316	+				+0.5
1,555,316	+				-0.1
1,555,316	+				+1.1
1,555,316	+				-1.4
1,555,316	+				-0.3
1,555,316	+				-0.1
1,555,316	+				-0.4
1,555,316	+				-0.5
1,555,317	-				-0.3
1,555,321	+				+0.0
1,555,324	-				-1.4
1,555,324	-				-0.1
1,555,324	-				-2.2
1,555,324	-				-1.7
1,555,324	-				+0.9
1,555,324	-				-0.4
1,555,326	+				+0.5
1,555,326	+				+0.2
1,555,326	+				+0.2
1,555,326	+				-1.2
1,555,326	+				-0.7
1,555,334	-				+0.8
1,555,334	-				-0.5
1,555,334	-				+1.2
1,555,334	-				-0.3
1,555,334	-				-0.3
1,555,334	-				+0.6
1,555,334	-				+0.1
1,555,334	-				+0.2
1,555,334	-				-1.1
1,555,373	-				-1.5
1,555,416	+				+0.4
1,555,424	-				-0.6
1,555,424	-				-0.2
1,555,424	-				+1.2
1,555,434	-				+1.1
1,555,463	+				+0.6
1,555,470	+				-2.5
1,555,470	+				+0.0
1,555,471	-				-0.1
1,555,478	-				-1.9
1,555,478	-				+0.4
1,555,478	-				+1.3
1,555,478	-				-0.6
1,555,503	+				-0.3
1,555,503	+				-0.3
1,555,504	+				+1.2
1,555,507	+				-0.5
1,555,511	-				+0.5
1,555,513	-				+0.0
1,555,531	+				-0.9
1,555,538	-				+0.5
1,555,539	-				+0.0
1,555,539	-				-2.2
1,555,562	-		GFF1526	0.10	+1.2
1,555,593	+		GFF1526	0.11	+0.3
1,555,596	-		GFF1526	0.11	-0.2
1,555,596	-		GFF1526	0.11	-1.8
1,555,614	+		GFF1526	0.12	+0.1
1,555,614	+		GFF1526	0.12	+1.6
1,555,619	+		GFF1526	0.12	-0.2
1,555,621	+		GFF1526	0.12	-0.7
1,555,621	+		GFF1526	0.12	-0.2
1,555,621	+		GFF1526	0.12	+0.2
1,555,621	+		GFF1526	0.12	+0.3
1,555,627	-		GFF1526	0.13	+1.2
1,555,627	-		GFF1526	0.13	+0.6
1,555,629	-		GFF1526	0.13	-0.1
1,555,631	+		GFF1526	0.13	+1.1
1,555,644	-		GFF1526	0.13	+0.4
1,555,652	-		GFF1526	0.14	-0.7
1,555,709	-		GFF1526	0.16	+1.6
1,555,712	+		GFF1526	0.16	-0.2
1,555,717	+		GFF1526	0.16	-1.6
1,555,717	+		GFF1526	0.16	-0.4
1,555,725	-		GFF1526	0.17	+0.1
1,555,733	+		GFF1526	0.17	-0.4
1,555,738	+		GFF1526	0.17	+0.6
1,555,738	+		GFF1526	0.17	-1.5
1,555,738	+		GFF1526	0.17	-1.5
1,555,741	+		GFF1526	0.17	+0.1
1,555,741	+		GFF1526	0.17	-1.3
1,555,746	+		GFF1526	0.18	+0.6
1,555,746	+		GFF1526	0.18	+0.7
1,555,746	+		GFF1526	0.18	-0.0
1,555,756	-		GFF1526	0.18	+1.0
1,555,757	+		GFF1526	0.18	+0.1
1,555,759	-		GFF1526	0.18	+1.2
1,555,765	-		GFF1526	0.18	+0.5
1,555,780	+		GFF1526	0.19	+1.0
1,555,783	-		GFF1526	0.19	+1.6
1,555,811	-		GFF1526	0.20	+0.3
1,555,813	+		GFF1526	0.20	+0.5
1,555,819	-		GFF1526	0.21	+0.4
1,555,830	+		GFF1526	0.21	-0.2
1,555,830	+		GFF1526	0.21	-0.8
1,555,832	+		GFF1526	0.21	-0.0
1,555,833	-		GFF1526	0.21	-0.4
1,555,849	+		GFF1526	0.22	-0.5
1,555,849	+		GFF1526	0.22	+0.1
1,555,857	-		GFF1526	0.22	+0.5
1,555,857	-		GFF1526	0.22	+0.1
1,555,857	-		GFF1526	0.22	+0.7
1,555,857	-		GFF1526	0.22	+0.0
1,555,857	-		GFF1526	0.22	-1.5
1,555,857	-		GFF1526	0.22	-0.2
1,555,857	-		GFF1526	0.22	-0.3
1,555,862	-		GFF1526	0.22	-1.2
1,555,863	+		GFF1526	0.22	+0.6
1,555,863	+		GFF1526	0.22	+0.3
1,555,863	+		GFF1526	0.22	+0.9
1,555,863	+		GFF1526	0.22	-0.1
1,555,863	+		GFF1526	0.22	+0.4
1,555,869	+		GFF1526	0.23	+0.1
1,555,871	-		GFF1526	0.23	-0.7
1,555,871	-		GFF1526	0.23	+0.2
1,555,871	-		GFF1526	0.23	+0.4
1,555,871	-		GFF1526	0.23	-1.7
1,555,888	+		GFF1526	0.23	-0.9
1,555,900	+		GFF1526	0.24	-0.2
1,555,917	-		GFF1526	0.25	-0.8
1,555,921	+		GFF1526	0.25	-0.5
1,555,939	-		GFF1526	0.26	-0.9
1,555,944	+		GFF1526	0.26	-0.6
1,555,954	+		GFF1526	0.26	-0.5
1,555,962	+		GFF1526	0.27	-1.6
1,555,962	-		GFF1526	0.27	-0.6
1,555,962	-		GFF1526	0.27	-0.3
1,555,974	-		GFF1526	0.27	-0.5
1,555,982	+		GFF1526	0.27	-1.6
1,555,982	+		GFF1526	0.27	-0.4
1,555,982	+		GFF1526	0.27	-1.5
1,555,982	+		GFF1526	0.27	+0.1
1,555,982	+		GFF1526	0.27	-0.4
1,555,982	+		GFF1526	0.27	-0.5
1,555,982	+		GFF1526	0.27	+0.1
1,555,982	+		GFF1526	0.27	-0.8
1,555,982	+		GFF1526	0.27	-0.0
1,555,982	+		GFF1526	0.27	+0.6
1,555,982	+		GFF1526	0.27	-0.2
1,555,982	+		GFF1526	0.27	-0.9
1,555,982	+		GFF1526	0.27	-2.5
1,555,982	+		GFF1526	0.27	+1.2
1,555,982	+		GFF1526	0.27	-0.6
1,555,982	+		GFF1526	0.27	-1.3
1,555,982	+		GFF1526	0.27	-1.6
1,555,982	+		GFF1526	0.27	-1.4
1,555,982	+		GFF1526	0.27	-3.5
1,555,982	+		GFF1526	0.27	-1.6
1,555,982	+		GFF1526	0.27	+0.0
1,555,982	+		GFF1526	0.27	-0.5
1,555,982	+		GFF1526	0.27	+0.7
1,555,982	+		GFF1526	0.27	-0.9
1,555,982	+		GFF1526	0.27	-0.2
1,555,982	+		GFF1526	0.27	-0.6
1,555,982	+		GFF1526	0.27	+0.3
1,555,982	+		GFF1526	0.27	-1.1
1,555,982	+		GFF1526	0.27	+0.8
1,555,982	+		GFF1526	0.27	-0.2
1,555,982	+		GFF1526	0.27	-1.0
1,555,982	+		GFF1526	0.27	-0.9
1,555,982	+		GFF1526	0.27	+1.2
1,555,982	+		GFF1526	0.27	-1.0
1,555,982	+		GFF1526	0.27	+0.3
1,555,982	+		GFF1526	0.27	+0.2
1,555,982	+		GFF1526	0.27	+0.6
1,555,982	+		GFF1526	0.27	-0.7
1,555,982	+		GFF1526	0.27	+0.5
1,555,982	+		GFF1526	0.27	-0.3
1,555,982	+		GFF1526	0.27	+0.2
1,555,982	+		GFF1526	0.27	-2.5
1,555,982	+		GFF1526	0.27	-0.7
1,555,982	+		GFF1526	0.27	+0.0
1,555,982	+		GFF1526	0.27	-1.0
1,555,982	+		GFF1526	0.27	-1.6
1,555,982	+		GFF1526	0.27	-0.7
1,555,982	+		GFF1526	0.27	+0.8
1,555,982	+		GFF1526	0.27	-1.9
1,555,982	+		GFF1526	0.27	+0.1
1,555,982	+		GFF1526	0.27	-0.1
1,555,982	+		GFF1526	0.27	+0.2
1,555,982	+		GFF1526	0.27	-0.3
1,555,982	+		GFF1526	0.27	+0.5
1,555,982	+		GFF1526	0.27	-0.2
1,555,982	+		GFF1526	0.27	+0.1
1,555,984	+		GFF1526	0.27	+0.1
1,555,984	+		GFF1526	0.27	+0.6
1,555,987	+		GFF1526	0.28	-2.1
1,555,990	-		GFF1526	0.28	+1.5
1,555,990	-		GFF1526	0.28	-0.2
1,555,990	-		GFF1526	0.28	+0.3
1,555,990	-		GFF1526	0.28	-0.8
1,555,990	-		GFF1526	0.28	+0.2
1,555,990	-		GFF1526	0.28	+0.9
1,555,990	-		GFF1526	0.28	+0.3
1,555,990	-		GFF1526	0.28	-0.6
1,555,990	-		GFF1526	0.28	-0.3
1,555,990	-		GFF1526	0.28	+0.1
1,555,990	-		GFF1526	0.28	+1.3
1,555,990	-		GFF1526	0.28	-0.5
1,555,990	-		GFF1526	0.28	+0.1
1,555,990	-		GFF1526	0.28	+0.4
1,555,990	-		GFF1526	0.28	-1.7
1,555,990	-		GFF1526	0.28	+0.5
1,555,990	-		GFF1526	0.28	-1.1
1,555,990	-		GFF1526	0.28	-0.4
1,555,990	-		GFF1526	0.28	-1.2
1,555,990	-		GFF1526	0.28	-0.8
1,555,990	-		GFF1526	0.28	-0.2
1,555,990	-		GFF1526	0.28	-0.4
1,555,990	-		GFF1526	0.28	-0.0
1,555,990	-		GFF1526	0.28	-0.7
1,555,990	-		GFF1526	0.28	+0.4
1,555,990	-		GFF1526	0.28	-0.2
1,555,990	-		GFF1526	0.28	+0.2
1,555,990	-		GFF1526	0.28	+0.0
1,555,990	-		GFF1526	0.28	-0.8
1,555,990	-		GFF1526	0.28	-0.6
1,555,990	-		GFF1526	0.28	-0.6
1,555,990	-		GFF1526	0.28	-0.5
1,555,990	-		GFF1526	0.28	-0.4
1,555,990	-		GFF1526	0.28	-0.1
1,555,990	-		GFF1526	0.28	+0.2
1,555,990	-		GFF1526	0.28	+0.7
1,555,990	-		GFF1526	0.28	-0.5
1,555,990	-		GFF1526	0.28	+0.2
1,555,990	-		GFF1526	0.28	-0.9
1,555,990	-		GFF1526	0.28	-0.4
1,555,990	-		GFF1526	0.28	+1.4
1,555,990	-		GFF1526	0.28	-1.3
1,555,990	-		GFF1526	0.28	-0.9
1,555,990	-		GFF1526	0.28	-1.2
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1,555,990	-		GFF1526	0.28	+0.8
1,555,990	-		GFF1526	0.28	-1.9
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1,555,990	-		GFF1526	0.28	-1.1
1,555,990	-		GFF1526	0.28	-1.7
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1,555,992	-		GFF1526	0.28	-0.9
1,555,992	-		GFF1526	0.28	+0.3
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1,556,059	-		GFF1526	0.30	+0.7
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1,556,081	+		GFF1526	0.31	+0.5
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1,556,094	-		GFF1526	0.32	+0.0
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1,556,105	+		GFF1526	0.32	+0.1
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1,556,118	-		GFF1526	0.33	-1.1
1,556,118	-		GFF1526	0.33	-0.9
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1,556,173	-		GFF1526	0.35	+1.0
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1,556,173	-		GFF1526	0.35	-0.3
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1,556,250	-		GFF1526	0.38	-0.1
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1,556,606	-		GFF1526	0.53	-2.9
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