Strain Fitness in Sphingobium sp. HT1-2 around GFF4665

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,662,844	-		GFF4663	0.61	+1.3
4,662,849	-		GFF4663	0.61	-0.8
4,662,852	+		GFF4663	0.62	-1.1
4,662,857	+		GFF4663	0.62	-0.1
4,662,860	+		GFF4663	0.62	-0.5
4,662,875	-		GFF4663	0.63	-0.3
4,662,875	-		GFF4663	0.63	-0.8
4,662,879	+		GFF4663	0.63	-1.3
4,662,913	-		GFF4663	0.65	-0.7
4,662,919	+		GFF4663	0.66	+0.8
4,662,927	-		GFF4663	0.66	-1.8
4,662,951	+		GFF4663	0.68	+0.9
4,662,951	+		GFF4663	0.68	-0.1
4,662,959	-		GFF4663	0.68	+1.0
4,662,959	-		GFF4663	0.68	+0.3
4,662,959	-		GFF4663	0.68	-0.7
4,662,959	-		GFF4663	0.68	+1.2
4,662,959	-		GFF4663	0.68	-0.2
4,662,959	-		GFF4663	0.68	-0.5
4,662,966	+		GFF4663	0.69	+0.4
4,662,967	+		GFF4663	0.69	+0.7
4,662,974	-		GFF4663	0.69	-0.1
4,662,975	-		GFF4663	0.69	-0.4
4,662,980	+		GFF4663	0.70	-0.6
4,662,980	+		GFF4663	0.70	+0.1
4,662,988	+		GFF4663	0.70	-0.8
4,662,988	+		GFF4663	0.70	+0.3
4,662,990	+		GFF4663	0.70	-0.3
4,662,995	-		GFF4663	0.71	+0.7
4,662,996	-		GFF4663	0.71	-0.9
4,662,996	-		GFF4663	0.71	-2.2
4,663,001	-		GFF4663	0.71	+0.6
4,663,008	-		GFF4663	0.71	-1.6
4,663,008	-		GFF4663	0.71	-1.4
4,663,008	-		GFF4663	0.71	+0.1
4,663,008	-		GFF4663	0.71	-1.1
4,663,013	+		GFF4663	0.72	+0.3
4,663,013	+		GFF4663	0.72	-0.8
4,663,019	-		GFF4663	0.72	+0.8
4,663,024	+		GFF4663	0.72	-0.2
4,663,027	-		GFF4663	0.73	+0.2
4,663,040	-		GFF4663	0.73	-1.9
4,663,040	-		GFF4663	0.73	+0.4
4,663,040	-		GFF4663	0.73	+0.3
4,663,042	-		GFF4663	0.74	-0.7
4,663,046	+		GFF4663	0.74	-0.5
4,663,046	-		GFF4663	0.74	+0.3
4,663,046	-		GFF4663	0.74	-1.7
4,663,046	-		GFF4663	0.74	+0.6
4,663,046	-		GFF4663	0.74	-2.0
4,663,054	-		GFF4663	0.74	-1.7
4,663,057	+		GFF4663	0.75	-0.5
4,663,057	+		GFF4663	0.75	-0.2
4,663,058	+		GFF4663	0.75	-1.3
4,663,060	-		GFF4663	0.75	+0.9
4,663,065	-		GFF4663	0.75	-0.9
4,663,065	-		GFF4663	0.75	-0.8
4,663,065	-		GFF4663	0.75	-0.2
4,663,065	-		GFF4663	0.75	-0.8
4,663,065	-		GFF4663	0.75	-0.1
4,663,070	-		GFF4663	0.75	-0.2
4,663,088	+		GFF4663	0.77	-0.1
4,663,088	+		GFF4663	0.77	-0.6
4,663,125	-		GFF4663	0.79	+0.4
4,663,137	+		GFF4663	0.80	+0.1
4,663,140	-		GFF4663	0.80	-0.2
4,663,147	+		GFF4663	0.80	-1.8
4,663,147	+		GFF4663	0.80	+0.2
4,663,147	-		GFF4663	0.80	+0.1
4,663,155	-		GFF4663	0.81	-0.5
4,663,155	-		GFF4663	0.81	-1.5
4,663,155	-		GFF4663	0.81	+0.2
4,663,155	-		GFF4663	0.81	-0.9
4,663,155	-		GFF4663	0.81	+0.7
4,663,155	-		GFF4663	0.81	+0.0
4,663,155	-		GFF4663	0.81	-0.6
4,663,160	+		GFF4663	0.81	+0.7
4,663,178	-		GFF4663	0.82	-0.9
4,663,178	-		GFF4663	0.82	-1.8
4,663,180	+		GFF4663	0.82	-0.3
4,663,180	-		GFF4663	0.82	+0.2
4,663,185	+		GFF4663	0.83	+1.1
4,663,185	+		GFF4663	0.83	-1.6
4,663,185	+		GFF4663	0.83	-0.7
4,663,185	+		GFF4663	0.83	+0.1
4,663,185	+		GFF4663	0.83	-0.4
4,663,185	+		GFF4663	0.83	-1.5
4,663,185	+		GFF4663	0.83	+0.3
4,663,190	+		GFF4663	0.83	-0.7
4,663,190	+		GFF4663	0.83	-0.8
4,663,193	-		GFF4663	0.83	-0.1
4,663,198	-		GFF4663	0.83	-0.3
4,663,198	-		GFF4663	0.83	-0.8
4,663,198	-		GFF4663	0.83	+0.3
4,663,217	+		GFF4663	0.85	-1.8
4,663,222	+		GFF4663	0.85	-1.3
4,663,232	+		GFF4663	0.86	-1.0
4,663,232	+		GFF4663	0.86	-0.8
4,663,237	+		GFF4663	0.86	-0.9
4,663,237	+		GFF4663	0.86	-0.1
4,663,237	+		GFF4663	0.86	-1.1
4,663,237	+		GFF4663	0.86	-2.5
4,663,240	-		GFF4663	0.86	-1.9
4,663,240	-		GFF4663	0.86	+1.7
4,663,245	-		GFF4663	0.86	-1.2
4,663,245	-		GFF4663	0.86	-1.3
4,663,245	-		GFF4663	0.86	-0.1
4,663,245	-		GFF4663	0.86	-0.4
4,663,247	+		GFF4663	0.87	-0.1
4,663,247	+		GFF4663	0.87	-0.3
4,663,247	+		GFF4663	0.87	+0.7
4,663,247	+		GFF4663	0.87	+1.7
4,663,255	-		GFF4663	0.87	-1.3
4,663,255	-		GFF4663	0.87	+0.5
4,663,255	-		GFF4663	0.87	-0.4
4,663,255	-		GFF4663	0.87	+1.3
4,663,260	+		GFF4663	0.87	+0.8
4,663,268	-		GFF4663	0.88	+1.6
4,663,282	+		GFF4663	0.89	-1.6
4,663,289	-		GFF4663	0.89	-0.6
4,663,294	+		GFF4663	0.90	+0.3
4,663,294	+		GFF4663	0.90	-0.5
4,663,304	+				-0.7
4,663,320	+				+1.0
4,663,321	+				-0.1
4,663,338	+				+0.2
4,663,344	-				-1.8
4,663,344	-				+1.4
4,663,346	-				-1.0
4,663,351	+				+0.1
4,663,351	+				+0.3
4,663,356	+				-0.8
4,663,356	+				-0.3
4,663,359	-				+0.7
4,663,359	-				-0.3
4,663,359	-				-1.3
4,663,363	+				+0.8
4,663,364	-				-0.5
4,663,364	-				-1.3
4,663,366	-				-1.7
4,663,387	+				-0.5
4,663,392	+				-1.3
4,663,395	-				-0.0
4,663,397	+				-0.6
4,663,397	+				-0.8
4,663,397	+				-0.4
4,663,397	+				+0.4
4,663,397	+				-2.0
4,663,397	+				-0.2
4,663,397	+				-0.3
4,663,397	+				-1.1
4,663,397	+				+0.8
4,663,397	+				-1.5
4,663,405	-				-0.1
4,663,405	-				+0.2
4,663,405	-				-1.0
4,663,405	-				+0.0
4,663,405	-				-0.2
4,663,405	-				-1.2
4,663,405	-				+0.2
4,663,405	-				-1.5
4,663,405	-				-0.9
4,663,405	-				-1.5
4,663,405	-				-0.5
4,663,405	-				+0.7
4,663,405	-				-1.6
4,663,405	-				-1.4
4,663,405	-				-0.2
4,663,405	-				-0.7
4,663,405	-				-1.4
4,663,405	-				-1.6
4,663,405	-				+0.1
4,663,418	-				+1.9
4,663,421	+				-0.6
4,663,426	-				+0.6
4,663,429	-				-2.3
4,663,432	+				+0.1
4,663,444	+				-0.5
4,663,452	-				-1.2
4,663,455	+				+0.9
4,663,455	-				+0.5
4,663,463	+				+0.9
4,663,476	+				-1.2
4,663,476	+				-0.3
4,663,476	+				-0.2
4,663,476	+				-1.1
4,663,476	+				-1.6
4,663,484	-				+0.6
4,663,484	-				-0.3
4,663,484	-				+0.4
4,663,484	-				-0.3
4,663,484	-				-0.6
4,663,501	+				-0.9
4,663,516	-				-1.3
4,663,517	+				-0.0
4,663,530	+		GFF4664	0.11	-0.0
4,663,533	+		GFF4664	0.12	-0.2
4,663,533	+		GFF4664	0.12	-1.7
4,663,534	-		GFF4664	0.13	-1.7
4,663,541	-		GFF4664	0.15	-0.4
4,663,541	-		GFF4664	0.15	+0.9
4,663,541	-		GFF4664	0.15	-1.7
4,663,541	-		GFF4664	0.15	-0.5
4,663,542	+		GFF4664	0.15	-0.3
4,663,542	+		GFF4664	0.15	-0.6
4,663,543	+		GFF4664	0.15	-1.3
4,663,543	+		GFF4664	0.15	+0.8
4,663,543	+		GFF4664	0.15	+0.4
4,663,543	+		GFF4664	0.15	-0.7
4,663,543	+		GFF4664	0.15	-0.9
4,663,543	+		GFF4664	0.15	+0.4
4,663,550	-		GFF4664	0.17	+0.3
4,663,551	-		GFF4664	0.17	-1.6
4,663,552	+		GFF4664	0.18	+0.1
4,663,552	+		GFF4664	0.18	-0.8
4,663,552	+		GFF4664	0.18	-1.9
4,663,558	-		GFF4664	0.19	+0.5
4,663,560	-		GFF4664	0.20	-0.7
4,663,560	-		GFF4664	0.20	-0.9
4,663,560	-		GFF4664	0.20	+0.4
4,663,560	-		GFF4664	0.20	+0.5
4,663,560	-		GFF4664	0.20	-1.2
4,663,575	-		GFF4664	0.24	+1.4
4,663,575	-		GFF4664	0.24	-1.3
4,663,575	-		GFF4664	0.24	-0.0
4,663,575	-		GFF4664	0.24	-2.1
4,663,595	-		GFF4664	0.30	-1.5
4,663,597	+		GFF4664	0.30	+0.5
4,663,597	+		GFF4664	0.30	-0.3
4,663,597	+		GFF4664	0.30	-1.5
4,663,600	-		GFF4664	0.31	-2.2
4,663,605	-		GFF4664	0.32	-0.2
4,663,605	-		GFF4664	0.32	-1.2
4,663,605	-		GFF4664	0.32	-0.9
4,663,607	-		GFF4664	0.33	+0.2
4,663,612	-		GFF4664	0.34	-1.0
4,663,614	+		GFF4664	0.35	-2.6
4,663,614	+		GFF4664	0.35	-0.9
4,663,629	+		GFF4664	0.39	+1.1
4,663,632	-		GFF4664	0.40	-1.5
4,663,632	-		GFF4664	0.40	-0.5
4,663,637	+		GFF4664	0.41	-0.5
4,663,637	-		GFF4664	0.41	-2.1
4,663,637	-		GFF4664	0.41	-1.2
4,663,637	-		GFF4664	0.41	+0.9
4,663,646	+		GFF4664	0.44	+1.0
4,663,646	+		GFF4664	0.44	-0.7
4,663,650	+		GFF4664	0.45	-0.2
4,663,654	+		GFF4664	0.46	-1.3
4,663,654	-		GFF4664	0.46	+1.0
4,663,654	-		GFF4664	0.46	+0.4
4,663,656	+		GFF4664	0.47	-1.8
4,663,656	+		GFF4664	0.47	+0.2
4,663,658	-		GFF4664	0.47	-0.9
4,663,658	-		GFF4664	0.47	+0.3
4,663,659	-		GFF4664	0.48	-1.8
4,663,661	+		GFF4664	0.48	+0.4
4,663,664	-		GFF4664	0.49	-0.8
4,663,664	-		GFF4664	0.49	-0.2
4,663,664	-		GFF4664	0.49	+1.5
4,663,664	-		GFF4664	0.49	-0.6
4,663,664	-		GFF4664	0.49	-0.0
4,663,664	-		GFF4664	0.49	+1.5
4,663,664	-		GFF4664	0.49	-0.3
4,663,665	+		GFF4664	0.49	+0.1
4,663,665	+		GFF4664	0.49	+0.4
4,663,665	+		GFF4664	0.49	-0.0
4,663,665	+		GFF4664	0.49	-0.5
4,663,670	+		GFF4664	0.51	+0.1
4,663,670	+		GFF4664	0.51	+0.4
4,663,673	-		GFF4664	0.52	+0.3
4,663,673	-		GFF4664	0.52	-2.4
4,663,673	-		GFF4664	0.52	+1.3
4,663,673	-		GFF4664	0.52	+0.3
4,663,673	-		GFF4664	0.52	-0.3
4,663,675	+		GFF4664	0.52	-0.6
4,663,678	-		GFF4664	0.53	-1.2
4,663,678	-		GFF4664	0.53	-0.8
4,663,678	-		GFF4664	0.53	+0.7
4,663,678	-		GFF4664	0.53	-1.3
4,663,679	+		GFF4664	0.53	-1.0
4,663,679	+		GFF4664	0.53	-1.1
4,663,679	+		GFF4664	0.53	-0.4
4,663,679	+		GFF4664	0.53	-0.0
4,663,680	+		GFF4664	0.54	-1.9
4,663,683	-		GFF4664	0.54	+0.2
4,663,687	-		GFF4664	0.55	-1.3
4,663,689	+		GFF4664	0.56	-0.1
4,663,694	+		GFF4664	0.57	-2.2
4,663,703	+		GFF4664	0.60	-0.5
4,663,705	-		GFF4664	0.61	+0.4
4,663,712	+		GFF4664	0.62	-0.5
4,663,720	-		GFF4664	0.65	+0.1
4,663,720	-		GFF4664	0.65	-2.9
4,663,720	-		GFF4664	0.65	+0.1
4,663,720	-		GFF4664	0.65	-1.2
4,663,720	-		GFF4664	0.65	+0.7
4,663,742	+		GFF4664	0.71	+0.5
4,663,746	+		GFF4664	0.72	-0.2
4,663,751	+		GFF4664	0.73	-0.1
4,663,754	-		GFF4664	0.74	+0.2
4,663,756	+		GFF4664	0.75	-0.6
4,663,756	+		GFF4664	0.75	+1.4
4,663,756	+		GFF4664	0.75	+1.2
4,663,756	+		GFF4664	0.75	-0.5
4,663,756	+		GFF4664	0.75	+0.2
4,663,764	-		GFF4664	0.77	-0.1
4,663,773	+		GFF4664	0.80	-0.5
4,663,774	+		GFF4664	0.80	-1.3
4,663,782	-		GFF4664	0.82	-1.1
4,663,782	-		GFF4664	0.82	+0.6
4,663,782	-		GFF4664	0.82	-0.2
4,663,782	-		GFF4664	0.82	-0.9
4,663,782	-		GFF4664	0.82	-1.6
4,663,822	+				-0.5
4,663,838	-				-2.0
4,663,838	-				-0.7
4,663,840	-				-0.7
4,663,843	-				+0.2
4,663,852	+				+0.0
4,663,853	+				+0.2
4,663,860	-				+0.1
4,663,860	-				-1.9
4,663,860	-				+0.7
4,663,860	-				-0.3
4,663,861	+				-2.3
4,663,861	-				-0.5
4,663,861	-				-0.4
4,663,861	-				-0.7
4,663,861	-				-2.6
4,663,865	+				-0.7
4,663,901	+		GFF4665	0.13	-0.3
4,663,913	+		GFF4665	0.16	-1.9
4,663,913	+		GFF4665	0.16	+0.3
4,663,913	+		GFF4665	0.16	+0.1
4,663,928	+		GFF4665	0.19	-0.4
4,663,942	+		GFF4665	0.22	+0.0
4,663,942	+		GFF4665	0.22	-0.2
4,663,942	+		GFF4665	0.22	+1.0
4,663,942	+		GFF4665	0.22	-2.2
4,663,942	+		GFF4665	0.22	+0.4
4,663,942	+		GFF4665	0.22	+0.3
4,663,942	+		GFF4665	0.22	-2.1
4,663,942	+		GFF4665	0.22	+0.2
4,663,947	+		GFF4665	0.23	-0.8
4,663,949	+		GFF4665	0.24	+1.0
4,663,950	-		GFF4665	0.24	+0.6
4,663,957	-		GFF4665	0.25	+1.6
4,663,985	+		GFF4665	0.32	+0.7
4,663,993	-		GFF4665	0.33	-0.0
4,664,033	-		GFF4665	0.42	-0.0
4,664,043	+		GFF4665	0.44	-0.5
4,664,049	-		GFF4665	0.46	-0.8
4,664,060	+		GFF4665	0.48	-2.1
4,664,068	-		GFF4665	0.50	-0.2
4,664,068	-		GFF4665	0.50	-0.4
4,664,073	+		GFF4665	0.51	-0.6
4,664,073	-		GFF4665	0.51	-1.2
4,664,123	+		GFF4665	0.62	-0.5
4,664,123	+		GFF4665	0.62	-0.5
4,664,123	+		GFF4665	0.62	-1.2
4,664,123	+		GFF4665	0.62	+0.4
4,664,123	+		GFF4665	0.62	-0.1
4,664,123	+		GFF4665	0.62	+0.3
4,664,123	+		GFF4665	0.62	-1.1
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