Strain Fitness in Sphingobium sp. HT1-2 around GFF4483

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,474,808	-		GFF4481	0.52	-0.8
4,474,816	+		GFF4481	0.54	+0.1
4,474,840	+		GFF4481	0.59	+0.3
4,474,847	-		GFF4481	0.61	+0.3
4,474,847	-		GFF4481	0.61	-1.4
4,474,847	-		GFF4481	0.61	-1.1
4,474,847	-		GFF4481	0.61	-2.0
4,474,868	-		GFF4481	0.65	-0.7
4,474,878	-		GFF4481	0.68	+0.6
4,474,890	-		GFF4481	0.70	+0.7
4,474,894	+		GFF4481	0.71	-1.6
4,474,915	-		GFF4481	0.76	+0.3
4,474,926	-		GFF4481	0.78	+0.4
4,474,935	+		GFF4481	0.80	-1.3
4,474,951	+		GFF4481	0.84	-0.9
4,474,973	-		GFF4481	0.89	-0.9
4,475,002	-				-0.3
4,475,032	-				-1.3
4,475,034	+				-0.5
4,475,034	+				-0.1
4,475,034	+				+0.4
4,475,034	+				+0.6
4,475,034	+				-1.4
4,475,034	+				-1.4
4,475,034	+				-0.5
4,475,042	-				-0.1
4,475,047	+				+2.0
4,475,055	-				+1.1
4,475,055	-				+0.3
4,475,065	+				-1.6
4,475,073	-				+0.2
4,475,205	-		GFF4482	0.23	-1.7
4,475,208	-		GFF4482	0.23	+0.7
4,475,254	+		GFF4482	0.31	-2.0
4,475,254	+		GFF4482	0.31	-0.2
4,475,254	+		GFF4482	0.31	+0.4
4,475,271	+		GFF4482	0.33	-2.2
4,475,274	-		GFF4482	0.34	+0.3
4,475,279	-		GFF4482	0.35	+0.4
4,475,279	-		GFF4482	0.35	-0.2
4,475,279	-		GFF4482	0.35	+0.6
4,475,281	+		GFF4482	0.35	-0.2
4,475,281	+		GFF4482	0.35	-0.3
4,475,284	-		GFF4482	0.35	+1.5
4,475,289	-		GFF4482	0.36	+0.3
4,475,316	-		GFF4482	0.41	+1.9
4,475,346	-		GFF4482	0.46	+1.5
4,475,358	+		GFF4482	0.48	+0.2
4,475,390	+		GFF4482	0.53	+1.0
4,475,392	-		GFF4482	0.53	-0.5
4,475,393	+		GFF4482	0.53	+1.0
4,475,398	+		GFF4482	0.54	+0.5
4,475,398	+		GFF4482	0.54	+0.1
4,475,398	+		GFF4482	0.54	+0.6
4,475,400	-		GFF4482	0.54	+0.1
4,475,424	+		GFF4482	0.58	-0.4
4,475,432	-		GFF4482	0.60	+0.6
4,475,436	+		GFF4482	0.60	+0.8
4,475,443	+		GFF4482	0.61	+0.2
4,475,458	-		GFF4482	0.64	-1.4
4,475,497	+		GFF4482	0.70	-0.2
4,475,497	+		GFF4482	0.70	+0.1
4,475,505	-		GFF4482	0.72	+0.6
4,475,505	-		GFF4482	0.72	-0.0
4,475,505	-		GFF4482	0.72	+0.4
4,475,520	+		GFF4482	0.74	-0.5
4,475,536	-		GFF4482	0.77	+0.4
4,475,543	-		GFF4482	0.78	+1.3
4,475,543	-		GFF4482	0.78	-1.3
4,475,545	+		GFF4482	0.78	+1.2
4,475,554	+		GFF4482	0.80	+1.2
4,475,554	+		GFF4482	0.80	+0.2
4,475,554	+		GFF4482	0.80	-0.3
4,475,554	+		GFF4482	0.80	-0.4
4,475,554	+		GFF4482	0.80	+0.5
4,475,554	+		GFF4482	0.80	-0.8
4,475,554	+		GFF4482	0.80	+0.3
4,475,554	+		GFF4482	0.80	+0.4
4,475,554	+		GFF4482	0.80	+0.5
4,475,562	-		GFF4482	0.81	+1.8
4,475,562	-		GFF4482	0.81	+1.4
4,475,562	-		GFF4482	0.81	+0.4
4,475,562	-		GFF4482	0.81	+1.5
4,475,562	-		GFF4482	0.81	-0.3
4,475,562	-		GFF4482	0.81	+0.2
4,475,562	-		GFF4482	0.81	-1.6
4,475,562	-		GFF4482	0.81	-0.5
4,475,562	-		GFF4482	0.81	-0.5
4,475,562	-		GFF4482	0.81	+0.7
4,475,562	-		GFF4482	0.81	-0.3
4,475,562	-		GFF4482	0.81	+1.3
4,475,562	-		GFF4482	0.81	+1.2
4,475,573	+		GFF4482	0.83	+0.1
4,475,580	+		GFF4482	0.84	+1.6
4,475,580	+		GFF4482	0.84	-0.1
4,475,580	+		GFF4482	0.84	-0.8
4,475,580	+		GFF4482	0.84	-1.9
4,475,588	-		GFF4482	0.85	+0.7
4,475,588	-		GFF4482	0.85	+1.3
4,475,588	-		GFF4482	0.85	+0.6
4,475,588	-		GFF4482	0.85	+0.8
4,475,588	-		GFF4482	0.85	-0.6
4,475,588	-		GFF4482	0.85	-0.1
4,475,588	-		GFF4482	0.85	+0.4
4,475,588	-		GFF4482	0.85	+1.0
4,475,588	-		GFF4482	0.85	+0.2
4,475,588	-		GFF4482	0.85	+1.9
4,475,614	-		GFF4482	0.89	+0.2
4,475,647	-				+0.8
4,475,684	-				-0.6
4,475,686	-				+1.2
4,475,686	-				+0.9
4,475,686	-				+0.2
4,475,703	-				-0.7
4,475,708	+				+1.4
4,475,708	+				+0.2
4,475,716	+				+1.2
4,475,716	+				+0.2
4,475,716	+				+0.4
4,475,724	-				+0.7
4,475,724	-				+0.7
4,475,724	-				+1.3
4,475,724	-				+0.2
4,475,726	+				+1.1
4,475,734	-				+1.2
4,475,734	-				-0.0
4,475,741	-				-2.1
4,475,781	+				-1.3
4,475,789	-				+1.8
4,475,789	-				-0.0
4,475,792	+				-0.6
4,475,800	-				-0.1
4,475,820	+				-0.7
4,475,820	+				+0.6
4,475,831	+				-0.3
4,475,831	+				+0.9
4,475,831	+				-0.4
4,475,843	-				+0.4
4,475,925	+		GFF4483	0.11	-1.0
4,475,961	+		GFF4483	0.14	+0.9
4,476,006	-		GFF4483	0.18	-1.4
4,476,030	-		GFF4483	0.20	+1.3
4,476,046	+		GFF4483	0.21	-0.6
4,476,046	+		GFF4483	0.21	-0.1
4,476,046	+		GFF4483	0.21	-0.6
4,476,046	+		GFF4483	0.21	-0.2
4,476,054	-		GFF4483	0.21	+0.2
4,476,054	-		GFF4483	0.21	+0.2
4,476,054	-		GFF4483	0.21	-1.4
4,476,057	+		GFF4483	0.22	-1.3
4,476,065	-		GFF4483	0.22	-1.6
4,476,095	+		GFF4483	0.25	-0.8
4,476,103	-		GFF4483	0.25	+0.1
4,476,136	+		GFF4483	0.28	+0.2
4,476,141	+		GFF4483	0.28	-0.3
4,476,142	-		GFF4483	0.28	+0.7
4,476,144	-		GFF4483	0.29	+1.6
4,476,144	-		GFF4483	0.29	+0.8
4,476,149	-		GFF4483	0.29	-0.8
4,476,167	-		GFF4483	0.30	-1.2
4,476,167	-		GFF4483	0.30	-0.2
4,476,206	-		GFF4483	0.33	+0.1
4,476,206	-		GFF4483	0.33	-1.3
4,476,217	+		GFF4483	0.34	+0.7
4,476,223	+		GFF4483	0.35	-0.9
4,476,223	+		GFF4483	0.35	-1.6
4,476,223	+		GFF4483	0.35	-0.1
4,476,228	+		GFF4483	0.35	-1.1
4,476,230	+		GFF4483	0.35	-0.2
4,476,230	+		GFF4483	0.35	-0.3
4,476,230	+		GFF4483	0.35	-1.9
4,476,230	+		GFF4483	0.35	-0.2
4,476,231	-		GFF4483	0.35	-0.5
4,476,236	-		GFF4483	0.36	+0.6
4,476,238	-		GFF4483	0.36	-0.2
4,476,238	-		GFF4483	0.36	-0.3
4,476,238	-		GFF4483	0.36	-1.3
4,476,238	-		GFF4483	0.36	-0.0
4,476,238	-		GFF4483	0.36	-0.4
4,476,257	+		GFF4483	0.37	+0.9
4,476,267	-		GFF4483	0.38	-0.1
4,476,291	+		GFF4483	0.40	-0.4
4,476,291	+		GFF4483	0.40	-1.7
4,476,299	-		GFF4483	0.41	-0.5
4,476,299	-		GFF4483	0.41	-1.3
4,476,299	-		GFF4483	0.41	-0.5
4,476,303	+		GFF4483	0.41	-1.3
4,476,303	+		GFF4483	0.41	-0.5
4,476,303	+		GFF4483	0.41	-0.1
4,476,303	+		GFF4483	0.41	-0.5
4,476,303	+		GFF4483	0.41	-1.3
4,476,303	+		GFF4483	0.41	+0.6
4,476,305	-		GFF4483	0.41	-0.3
4,476,306	-		GFF4483	0.41	+1.0
4,476,311	-		GFF4483	0.42	+0.2
4,476,311	-		GFF4483	0.42	-0.2
4,476,311	-		GFF4483	0.42	+0.7
4,476,311	-		GFF4483	0.42	-0.6
4,476,311	-		GFF4483	0.42	+0.6
4,476,328	-		GFF4483	0.43	+0.9
4,476,364	-		GFF4483	0.46	-0.3
4,476,375	+		GFF4483	0.47	+0.8
4,476,443	-		GFF4483	0.52	-1.9
4,476,459	+		GFF4483	0.53	-0.7
4,476,492	+		GFF4483	0.56	+0.1
4,476,505	-		GFF4483	0.57	+0.4
4,476,517	+		GFF4483	0.58	+0.2
4,476,517	-		GFF4483	0.58	+0.6
4,476,535	+		GFF4483	0.59	+0.6
4,476,535	+		GFF4483	0.59	-1.3
4,476,543	-		GFF4483	0.60	+0.5
4,476,545	+		GFF4483	0.60	-0.9
4,476,550	+		GFF4483	0.61	-0.0
4,476,563	-		GFF4483	0.62	-0.4
4,476,572	+		GFF4483	0.62	-0.8
4,476,578	+		GFF4483	0.63	+0.7
4,476,586	-		GFF4483	0.63	+0.2
4,476,611	+		GFF4483	0.65	+0.9
4,476,642	+		GFF4483	0.68	-0.8
4,476,646	+		GFF4483	0.68	+0.1
4,476,695	-		GFF4483	0.72	+0.1
4,476,701	-		GFF4483	0.73	+1.9
4,476,706	-		GFF4483	0.73	+1.0
4,476,706	-		GFF4483	0.73	+1.5
4,476,709	-		GFF4483	0.73	-1.2
4,476,710	-		GFF4483	0.73	-1.6
4,476,716	-		GFF4483	0.74	-1.7
4,476,720	-		GFF4483	0.74	+0.2
4,476,722	+		GFF4483	0.74	-0.5
4,476,752	-		GFF4483	0.77	+0.1
4,476,752	-		GFF4483	0.77	-1.6
4,476,780	-		GFF4483	0.79	+0.1
4,476,784	+		GFF4483	0.79	-2.9
4,476,792	-		GFF4483	0.80	-1.2
4,476,805	-		GFF4483	0.81	+1.3
4,476,856	-		GFF4483	0.85	+1.5
4,476,861	+		GFF4483	0.85	-0.5
4,476,861	+		GFF4483	0.85	-0.1
4,476,861	+		GFF4483	0.85	-0.2
4,476,867	+		GFF4483	0.86	-0.8
4,476,869	-		GFF4483	0.86	+0.1
4,476,873	+		GFF4483	0.86	-0.9
4,476,876	-		GFF4483	0.86	-3.5
4,476,878	+		GFF4483	0.86	-2.0
4,476,891	+		GFF4483	0.88	-1.4
4,476,896	+		GFF4483	0.88	-0.1
4,476,909	+		GFF4483	0.89	-0.7
4,476,956	+				+1.6
4,476,992	+				+1.3
4,477,000	-				-0.8
4,477,000	-				-0.8
4,477,000	-				-0.2
4,477,000	-				+0.5
4,477,000	-				-0.6
4,477,015	+				-0.5
4,477,015	+				-1.5
4,477,018	-				+1.6
4,477,065	-				-0.2
4,477,066	-				-2.4
4,477,066	-				+0.2
4,477,069	+				+0.7
4,477,069	+				+0.3
4,477,069	+				+0.3
4,477,077	-				-0.5
4,477,077	-				-0.3
4,477,113	-				-1.6
4,477,118	-				-0.4
4,477,118	-				+0.9
4,477,118	-				-0.6
4,477,128	-				+0.1
4,477,130	-				-1.2
4,477,132	+				-0.6
4,477,151	-				+0.7
4,477,163	-				+0.3
4,477,163	-				-0.2
4,477,163	-				+1.0
4,477,163	-				+0.7
4,477,226	+				+1.0
4,477,279	-		GFF4484	0.12	-0.6
4,477,280	+		GFF4484	0.12	-1.3
4,477,288	-		GFF4484	0.13	-1.4
4,477,302	+		GFF4484	0.14	-1.4
4,477,303	-		GFF4484	0.14	-0.3
4,477,304	-		GFF4484	0.14	-1.6
4,477,347	+		GFF4484	0.16	+0.5
4,477,347	+		GFF4484	0.16	-2.2
4,477,347	+		GFF4484	0.16	+1.1
4,477,355	-		GFF4484	0.16	+1.3
4,477,365	+		GFF4484	0.17	-2.6
4,477,373	-		GFF4484	0.17	+2.1
4,477,399	+		GFF4484	0.19	-1.3
4,477,428	+		GFF4484	0.20	-0.6
4,477,433	+		GFF4484	0.20	-0.6
4,477,433	+		GFF4484	0.20	+0.2
4,477,433	+		GFF4484	0.20	-1.2
4,477,436	-		GFF4484	0.21	+0.2
4,477,460	+		GFF4484	0.22	+1.3
4,477,463	-		GFF4484	0.22	-0.8
4,477,479	+		GFF4484	0.23	-2.1
4,477,508	-		GFF4484	0.24	+0.6
4,477,508	-		GFF4484	0.24	-0.4
4,477,509	-		GFF4484	0.24	+0.5
4,477,514	+		GFF4484	0.25	+1.1
4,477,531	+		GFF4484	0.26	-0.3
4,477,540	+		GFF4484	0.26	-1.1
4,477,558	+		GFF4484	0.27	-0.3
4,477,559	+		GFF4484	0.27	+0.9
4,477,559	+		GFF4484	0.27	-1.5
4,477,559	+		GFF4484	0.27	-0.3
4,477,559	+		GFF4484	0.27	+0.1
4,477,567	-		GFF4484	0.28	+0.9
4,477,567	-		GFF4484	0.28	+0.4
4,477,567	-		GFF4484	0.28	+0.0
4,477,567	-		GFF4484	0.28	+0.2
4,477,567	-		GFF4484	0.28	+0.1
4,477,567	-		GFF4484	0.28	+0.2
4,477,598	+		GFF4484	0.29	-0.3
4,477,612	+		GFF4484	0.30	+0.8
4,477,646	-		GFF4484	0.32	-0.1
4,477,708	-		GFF4484	0.35	+0.6
4,477,720	+		GFF4484	0.36	+0.7
4,477,734	+		GFF4484	0.36	+1.9
4,477,771	+		GFF4484	0.38	+0.9
4,477,785	-		GFF4484	0.39	+0.0
4,477,787	-		GFF4484	0.39	+0.8
4,477,792	+		GFF4484	0.39	+0.1
4,477,795	-		GFF4484	0.40	+0.5
4,477,796	+		GFF4484	0.40	+0.1
4,477,800	-		GFF4484	0.40	+1.2
4,477,804	-		GFF4484	0.40	-0.1
4,477,810	+		GFF4484	0.40	+0.4
4,477,833	-		GFF4484	0.42	+0.7
4,477,845	-		GFF4484	0.42	+0.4
4,477,850	+		GFF4484	0.42	+0.1
4,477,908	+		GFF4484	0.46	+0.3
4,477,908	+		GFF4484	0.46	+0.8
4,477,915	-		GFF4484	0.46	+0.7
4,477,915	-		GFF4484	0.46	+0.9
4,477,916	-		GFF4484	0.46	+0.7
4,477,918	+		GFF4484	0.46	-1.2
4,477,926	-		GFF4484	0.46	-2.3
4,477,933	-		GFF4484	0.47	+0.1
4,477,977	+		GFF4484	0.49	+0.1
4,477,977	+		GFF4484	0.49	-1.5
4,477,985	-		GFF4484	0.50	+1.5
4,477,997	-		GFF4484	0.50	+0.8
4,477,997	-		GFF4484	0.50	+0.3
4,477,997	-		GFF4484	0.50	+0.2
4,477,997	-		GFF4484	0.50	+0.3
4,478,012	+		GFF4484	0.51	-0.5
4,478,027	+		GFF4484	0.52	+0.4
4,478,035	-		GFF4484	0.52	+0.7
4,478,037	+		GFF4484	0.52	+0.5