Strain Fitness in Sphingobium sp. HT1-2 around GFF2362

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,382,976	+		GFF2361	0.25	-1.9
2,382,976	+		GFF2361	0.25	+0.4
2,382,976	+		GFF2361	0.25	-0.4
2,383,030	+		GFF2361	0.30	+0.4
2,383,050	-		GFF2361	0.31	+0.1
2,383,052	+		GFF2361	0.32	-0.4
2,383,052	+		GFF2361	0.32	-0.2
2,383,065	+		GFF2361	0.33	+1.5
2,383,091	+		GFF2361	0.35	-0.6
2,383,095	-		GFF2361	0.35	-1.6
2,383,097	+		GFF2361	0.36	-0.7
2,383,097	+		GFF2361	0.36	+1.1
2,383,097	+		GFF2361	0.36	-0.7
2,383,097	+		GFF2361	0.36	+0.3
2,383,104	+		GFF2361	0.36	+0.5
2,383,105	-		GFF2361	0.36	+0.2
2,383,105	-		GFF2361	0.36	-0.2
2,383,105	-		GFF2361	0.36	-0.6
2,383,105	-		GFF2361	0.36	+1.0
2,383,105	-		GFF2361	0.36	-3.3
2,383,105	-		GFF2361	0.36	-2.3
2,383,134	+		GFF2361	0.39	-0.6
2,383,156	+		GFF2361	0.41	+0.3
2,383,159	+		GFF2361	0.41	-0.8
2,383,195	-		GFF2361	0.44	-0.8
2,383,201	-		GFF2361	0.45	-1.6
2,383,209	+		GFF2361	0.46	+0.8
2,383,211	+		GFF2361	0.46	+0.1
2,383,215	-		GFF2361	0.46	+1.7
2,383,215	-		GFF2361	0.46	-0.6
2,383,217	+		GFF2361	0.46	-1.5
2,383,217	+		GFF2361	0.46	-1.9
2,383,217	+		GFF2361	0.46	-1.0
2,383,224	+		GFF2361	0.47	-0.8
2,383,226	+		GFF2361	0.47	-2.3
2,383,226	+		GFF2361	0.47	+0.9
2,383,232	-		GFF2361	0.48	-0.5
2,383,233	-		GFF2361	0.48	+0.9
2,383,234	-		GFF2361	0.48	-0.9
2,383,239	-		GFF2361	0.48	+0.0
2,383,239	-		GFF2361	0.48	-1.8
2,383,241	+		GFF2361	0.49	+1.1
2,383,248	+		GFF2361	0.49	-1.3
2,383,248	+		GFF2361	0.49	-0.4
2,383,253	+		GFF2361	0.50	+0.3
2,383,256	-		GFF2361	0.50	+1.0
2,383,270	+		GFF2361	0.51	-0.8
2,383,278	-		GFF2361	0.52	-0.4
2,383,293	+		GFF2361	0.53	-1.5
2,383,294	+		GFF2361	0.53	+0.6
2,383,294	+		GFF2361	0.53	-3.0
2,383,294	+		GFF2361	0.53	-2.0
2,383,302	-		GFF2361	0.54	-1.4
2,383,302	-		GFF2361	0.54	-0.1
2,383,304	+		GFF2361	0.54	+0.7
2,383,326	+		GFF2361	0.56	-0.0
2,383,326	+		GFF2361	0.56	-0.9
2,383,326	+		GFF2361	0.56	-0.6
2,383,326	+		GFF2361	0.56	+0.1
2,383,326	+		GFF2361	0.56	-1.8
2,383,326	+		GFF2361	0.56	-0.1
2,383,326	+		GFF2361	0.56	-0.8
2,383,326	+		GFF2361	0.56	-2.8
2,383,326	+		GFF2361	0.56	+1.3
2,383,326	+		GFF2361	0.56	-0.9
2,383,326	+		GFF2361	0.56	-1.9
2,383,326	+		GFF2361	0.56	-0.6
2,383,326	+		GFF2361	0.56	-1.3
2,383,326	+		GFF2361	0.56	+0.0
2,383,326	+		GFF2361	0.56	-2.2
2,383,326	+		GFF2361	0.56	+1.7
2,383,334	-		GFF2361	0.57	-0.4
2,383,334	-		GFF2361	0.57	+0.5
2,383,334	-		GFF2361	0.57	+0.2
2,383,334	-		GFF2361	0.57	+0.7
2,383,334	-		GFF2361	0.57	-0.6
2,383,334	-		GFF2361	0.57	-2.0
2,383,334	-		GFF2361	0.57	+0.9
2,383,334	-		GFF2361	0.57	-0.5
2,383,334	-		GFF2361	0.57	+0.3
2,383,334	-		GFF2361	0.57	-0.5
2,383,334	-		GFF2361	0.57	+0.4
2,383,334	-		GFF2361	0.57	-0.2
2,383,334	-		GFF2361	0.57	-0.1
2,383,334	-		GFF2361	0.57	-0.4
2,383,334	-		GFF2361	0.57	-0.2
2,383,334	-		GFF2361	0.57	-1.1
2,383,334	-		GFF2361	0.57	+1.1
2,383,334	-		GFF2361	0.57	-1.3
2,383,381	+		GFF2361	0.61	+1.5
2,383,386	+		GFF2361	0.62	-2.2
2,383,386	+		GFF2361	0.62	-0.7
2,383,386	+		GFF2361	0.62	-0.1
2,383,386	+		GFF2361	0.62	-1.0
2,383,386	+		GFF2361	0.62	+0.8
2,383,386	+		GFF2361	0.62	+0.2
2,383,386	+		GFF2361	0.62	-2.3
2,383,386	+		GFF2361	0.62	-0.5
2,383,391	+		GFF2361	0.62	+0.3
2,383,394	-		GFF2361	0.62	+0.6
2,383,394	-		GFF2361	0.62	-2.0
2,383,394	-		GFF2361	0.62	-0.8
2,383,394	-		GFF2361	0.62	+0.0
2,383,394	-		GFF2361	0.62	+0.2
2,383,394	-		GFF2361	0.62	-0.8
2,383,394	-		GFF2361	0.62	-0.4
2,383,394	-		GFF2361	0.62	-1.1
2,383,394	-		GFF2361	0.62	-2.0
2,383,394	-		GFF2361	0.62	-0.3
2,383,399	-		GFF2361	0.63	+0.0
2,383,433	-		GFF2361	0.66	+0.1
2,383,460	-		GFF2361	0.68	-1.6
2,383,460	-		GFF2361	0.68	-0.3
2,383,460	-		GFF2361	0.68	+0.3
2,383,460	-		GFF2361	0.68	-0.2
2,383,465	-		GFF2361	0.69	-0.4
2,383,477	+		GFF2361	0.70	-0.7
2,383,477	+		GFF2361	0.70	-0.9
2,383,485	-		GFF2361	0.70	-2.5
2,383,487	+		GFF2361	0.71	-0.0
2,383,499	+		GFF2361	0.72	+0.1
2,383,499	+		GFF2361	0.72	+0.5
2,383,499	+		GFF2361	0.72	-0.8
2,383,499	+		GFF2361	0.72	-0.6
2,383,499	+		GFF2361	0.72	-1.8
2,383,499	+		GFF2361	0.72	-1.1
2,383,499	+		GFF2361	0.72	+0.0
2,383,499	+		GFF2361	0.72	-0.4
2,383,506	+		GFF2361	0.72	-0.2
2,383,506	+		GFF2361	0.72	-2.5
2,383,507	-		GFF2361	0.72	-1.4
2,383,507	-		GFF2361	0.72	+0.1
2,383,507	-		GFF2361	0.72	-0.4
2,383,507	-		GFF2361	0.72	+0.2
2,383,507	-		GFF2361	0.72	-0.9
2,383,507	-		GFF2361	0.72	+1.0
2,383,507	-		GFF2361	0.72	+0.4
2,383,514	-		GFF2361	0.73	+0.4
2,383,519	+		GFF2361	0.73	+0.3
2,383,535	+		GFF2361	0.75	-2.5
2,383,542	+		GFF2361	0.76	+0.9
2,383,552	+		GFF2361	0.76	+0.2
2,383,552	+		GFF2361	0.76	+0.1
2,383,558	-		GFF2361	0.77	-1.8
2,383,569	-		GFF2361	0.78	-0.4
2,383,588	-		GFF2361	0.80	+1.1
2,383,598	-		GFF2361	0.81	+0.6
2,383,599	-		GFF2361	0.81	-0.9
2,383,600	+		GFF2361	0.81	+0.1
2,383,608	-		GFF2361	0.81	-3.3
2,383,625	+		GFF2361	0.83	-1.1
2,383,631	+		GFF2361	0.84	+0.6
2,383,633	-		GFF2361	0.84	-1.1
2,383,648	-		GFF2361	0.85	+0.3
2,383,653	-		GFF2361	0.85	-0.2
2,383,659	+		GFF2361	0.86	+0.7
2,383,659	+		GFF2361	0.86	-2.6
2,383,659	+		GFF2361	0.86	-0.9
2,383,659	+		GFF2361	0.86	-0.2
2,383,659	+		GFF2361	0.86	+0.8
2,383,659	+		GFF2361	0.86	-2.2
2,383,659	+		GFF2361	0.86	+0.2
2,383,659	+		GFF2361	0.86	-0.7
2,383,659	+		GFF2361	0.86	-1.5
2,383,659	+		GFF2361	0.86	+0.6
2,383,659	+		GFF2361	0.86	-0.1
2,383,659	+		GFF2361	0.86	+0.3
2,383,659	+		GFF2361	0.86	+0.0
2,383,659	+		GFF2361	0.86	-1.1
2,383,659	+		GFF2361	0.86	-0.1
2,383,659	+		GFF2361	0.86	+0.5
2,383,659	+		GFF2361	0.86	-0.8
2,383,659	+		GFF2361	0.86	-0.6
2,383,659	+		GFF2361	0.86	-1.1
2,383,659	+		GFF2361	0.86	-0.1
2,383,659	+		GFF2361	0.86	-3.0
2,383,659	+		GFF2361	0.86	-0.3
2,383,667	-		GFF2361	0.87	-0.6
2,383,667	-		GFF2361	0.87	+0.0
2,383,667	-		GFF2361	0.87	-0.8
2,383,667	-		GFF2361	0.87	-0.3
2,383,667	-		GFF2361	0.87	+1.1
2,383,667	-		GFF2361	0.87	-1.0
2,383,667	-		GFF2361	0.87	-0.2
2,383,667	-		GFF2361	0.87	-0.5
2,383,667	-		GFF2361	0.87	-0.7
2,383,667	-		GFF2361	0.87	-0.3
2,383,667	-		GFF2361	0.87	+0.2
2,383,667	-		GFF2361	0.87	-0.8
2,383,667	-		GFF2361	0.87	+0.5
2,383,667	-		GFF2361	0.87	+0.4
2,383,667	-		GFF2361	0.87	-3.8
2,383,667	-		GFF2361	0.87	+0.1
2,383,667	-		GFF2361	0.87	-0.3
2,383,667	-		GFF2361	0.87	-0.3
2,383,667	-		GFF2361	0.87	-0.4
2,383,667	-		GFF2361	0.87	+0.7
2,383,667	-		GFF2361	0.87	+0.6
2,383,685	+		GFF2361	0.88	+0.6
2,383,685	+		GFF2361	0.88	-1.8
2,383,685	+		GFF2361	0.88	-1.0
2,383,685	+		GFF2361	0.88	+1.6
2,383,685	+		GFF2361	0.88	+0.7
2,383,685	+		GFF2361	0.88	-1.4
2,383,693	-		GFF2361	0.89	+0.0
2,383,693	-		GFF2361	0.89	+0.6
2,383,693	-		GFF2361	0.89	-2.7
2,383,707	+				+1.1
2,383,717	+				+0.8
2,383,717	+				-0.9
2,383,717	+				+1.4
2,383,725	-				-0.3
2,383,725	-				-0.2
2,383,725	-				-1.8
2,383,733	+				+0.6
2,383,740	+				+0.7
2,383,746	-				+0.7
2,383,748	-				-0.3
2,383,762	+				-0.6
2,383,770	-				-0.4
2,383,770	-				-1.0
2,383,791	-				-1.6
2,383,793	+				+0.7
2,383,798	+				-0.3
2,383,803	+				-0.1
2,383,811	-				-1.2
2,383,811	-				+1.6
2,383,813	+				-1.1
2,383,816	-				-0.3
2,383,816	-				+0.2
2,383,821	-				-2.4
2,383,843	-				-0.9
2,383,843	-				+0.5
2,383,880	+				-0.1
2,383,880	+				+0.8
2,383,887	+				+0.0
2,383,916	+				-0.4
2,383,917	-				+0.7
2,383,926	-				-0.3
2,383,926	-				+1.7
2,384,003	-				+0.4
2,384,012	+				-0.1
2,384,012	+				+0.1
2,384,012	-				+1.3
2,384,020	-				-2.1
2,384,020	-				+0.0
2,384,020	-				-0.2
2,384,020	-				-1.5
2,384,032	+				+0.4
2,384,051	-				-0.3
2,384,075	-				-1.1
2,384,077	+				+0.0
2,384,085	-				+0.6
2,384,085	-				-0.5
2,384,110	+		GFF2362	0.12	+0.5
2,384,125	-		GFF2362	0.13	-0.3
2,384,169	-		GFF2362	0.17	+0.2
2,384,170	+		GFF2362	0.17	+1.2
2,384,177	-		GFF2362	0.17	+0.7
2,384,181	-		GFF2362	0.18	-0.1
2,384,191	-		GFF2362	0.19	-0.6
2,384,203	+		GFF2362	0.20	+0.7
2,384,221	+		GFF2362	0.21	+1.9
2,384,228	+		GFF2362	0.22	-1.6
2,384,240	+		GFF2362	0.23	-0.5
2,384,240	+		GFF2362	0.23	-1.8
2,384,240	+		GFF2362	0.23	-0.1
2,384,240	+		GFF2362	0.23	-0.1
2,384,240	+		GFF2362	0.23	+0.0
2,384,243	-		GFF2362	0.23	-0.7
2,384,247	-		GFF2362	0.24	+0.5
2,384,248	-		GFF2362	0.24	+1.0
2,384,248	-		GFF2362	0.24	+0.4
2,384,248	-		GFF2362	0.24	-0.5
2,384,248	-		GFF2362	0.24	-1.6
2,384,252	+		GFF2362	0.24	+0.4
2,384,277	+		GFF2362	0.26	-0.1
2,384,277	+		GFF2362	0.26	-0.3
2,384,287	+		GFF2362	0.27	-0.6
2,384,287	+		GFF2362	0.27	+1.0
2,384,287	+		GFF2362	0.27	-0.8
2,384,287	+		GFF2362	0.27	-0.4
2,384,287	+		GFF2362	0.27	-0.3
2,384,287	+		GFF2362	0.27	+0.4
2,384,287	+		GFF2362	0.27	-2.5
2,384,287	+		GFF2362	0.27	-0.4
2,384,287	+		GFF2362	0.27	+0.5
2,384,287	+		GFF2362	0.27	-1.0
2,384,287	+		GFF2362	0.27	-0.4
2,384,287	+		GFF2362	0.27	-1.2
2,384,287	+		GFF2362	0.27	+0.7
2,384,287	+		GFF2362	0.27	+0.4
2,384,287	+		GFF2362	0.27	+0.1
2,384,287	+		GFF2362	0.27	-2.1
2,384,287	+		GFF2362	0.27	-0.4
2,384,295	-		GFF2362	0.28	-0.5
2,384,295	-		GFF2362	0.28	-0.1
2,384,295	-		GFF2362	0.28	+1.7
2,384,295	-		GFF2362	0.28	-0.6
2,384,295	-		GFF2362	0.28	+0.2
2,384,295	-		GFF2362	0.28	+0.6
2,384,295	-		GFF2362	0.28	-0.1
2,384,295	-		GFF2362	0.28	+0.2
2,384,295	-		GFF2362	0.28	+0.4
2,384,295	-		GFF2362	0.28	+0.0
2,384,295	-		GFF2362	0.28	+0.3
2,384,295	-		GFF2362	0.28	-0.5
2,384,295	-		GFF2362	0.28	-1.5
2,384,295	-		GFF2362	0.28	+0.2
2,384,300	+		GFF2362	0.28	-0.8
2,384,304	-		GFF2362	0.29	-1.5
2,384,324	+		GFF2362	0.30	-1.5
2,384,348	+		GFF2362	0.32	-1.6
2,384,359	+		GFF2362	0.33	-1.0
2,384,362	-		GFF2362	0.34	-0.4
2,384,367	-		GFF2362	0.34	-1.4
2,384,378	-		GFF2362	0.35	-1.6
2,384,380	+		GFF2362	0.35	+0.2
2,384,441	+		GFF2362	0.40	+1.2
2,384,454	-		GFF2362	0.42	-2.2
2,384,529	-		GFF2362	0.48	+0.3
2,384,550	+		GFF2362	0.50	-0.5
2,384,550	+		GFF2362	0.50	-1.0
2,384,560	+		GFF2362	0.51	-1.7
2,384,560	+		GFF2362	0.51	+0.7
2,384,568	-		GFF2362	0.52	-1.2
2,384,568	-		GFF2362	0.52	-1.1
2,384,568	-		GFF2362	0.52	-2.8
2,384,568	-		GFF2362	0.52	-0.8
2,384,568	-		GFF2362	0.52	-0.1
2,384,575	-		GFF2362	0.52	-1.1
2,384,575	-		GFF2362	0.52	-0.1
2,384,584	+		GFF2362	0.53	-0.3
2,384,587	-		GFF2362	0.53	-0.5
2,384,624	+		GFF2362	0.56	+2.2
2,384,625	+		GFF2362	0.56	-1.3
2,384,633	-		GFF2362	0.57	-1.6
2,384,638	+		GFF2362	0.58	-0.5
2,384,639	+		GFF2362	0.58	+0.3
2,384,646	+		GFF2362	0.58	-1.4
2,384,647	-		GFF2362	0.58	-0.1
2,384,647	-		GFF2362	0.58	-2.1
2,384,654	-		GFF2362	0.59	+0.8
2,384,670	+		GFF2362	0.60	-1.8
2,384,673	-		GFF2362	0.61	-1.0
2,384,684	-		GFF2362	0.62	-0.8
2,384,707	+		GFF2362	0.64	-2.8
2,384,715	-		GFF2362	0.64	+0.4
2,384,753	+		GFF2362	0.68	-0.5
2,384,756	-		GFF2362	0.68	-0.4
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