Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13440

Experiment: R2A_PIPES with Nickel (II) chloride 424 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 424 uM
2,902,612	+				+0.6
2,902,612	+				+0.1
2,902,892	+		OKGIIK_13435	0.28	-1.6
2,903,008	+		OKGIIK_13435	0.41	+0.7
2,903,008	+		OKGIIK_13435	0.41	+1.0
2,903,008	+		OKGIIK_13435	0.41	-1.0
2,903,008	+		OKGIIK_13435	0.41	+0.2
2,903,009	-		OKGIIK_13435	0.42	+0.7
2,903,009	-		OKGIIK_13435	0.42	+1.7
2,903,340	+		OKGIIK_13435	0.81	-1.8
2,903,340	+		OKGIIK_13435	0.81	-1.1
2,903,341	-		OKGIIK_13435	0.81	-1.3
2,903,341	-		OKGIIK_13435	0.81	+0.2
2,903,341	-		OKGIIK_13435	0.81	-2.4
2,903,341	-		OKGIIK_13435	0.81	+1.7
2,903,353	+		OKGIIK_13435	0.82	-1.3
2,903,354	-		OKGIIK_13435	0.82	-0.1
2,903,432	+				+0.9
2,903,433	-				-0.8
2,903,495	+				+0.4
2,903,495	+				-1.3
2,903,495	+				-0.8
2,903,495	+				-0.8
2,903,495	+				-0.1
2,903,495	+				+0.1
2,903,495	+				+0.9
2,903,495	+				-0.8
2,903,495	+				+1.2
2,903,495	+				-1.5
2,903,495	+				-0.9
2,903,495	+				-0.3
2,903,496	-				-1.3
2,903,496	-				-2.1
2,903,496	-				-0.3
2,903,496	-				-0.5
2,903,496	-				-0.9
2,903,496	-				-0.7
2,903,496	-				+1.2
2,903,496	-				-0.3
2,903,496	-				+0.9
2,903,501	+				-1.9
2,903,501	+				+0.8
2,903,501	+				-2.2
2,903,502	-				-0.1
2,903,627	+				-0.1
2,903,628	-				+0.3
2,903,648	+				-0.5
2,903,648	+				+0.5
2,903,648	+				-0.8
2,903,648	+				-1.1
2,903,649	-				+0.1
2,903,649	-				-0.4
2,903,649	-				-1.1
2,903,685	-		OKGIIK_13440	0.12	-0.5
2,903,690	+		OKGIIK_13440	0.12	-0.7
2,903,690	+		OKGIIK_13440	0.12	+1.2
2,903,690	+		OKGIIK_13440	0.12	-1.7
2,903,690	+		OKGIIK_13440	0.12	-0.5
2,903,690	+		OKGIIK_13440	0.12	-1.3
2,903,690	+		OKGIIK_13440	0.12	-0.4
2,903,690	+		OKGIIK_13440	0.12	-1.6
2,903,691	-		OKGIIK_13440	0.12	-1.2
2,903,691	-		OKGIIK_13440	0.12	-1.5
2,903,691	-		OKGIIK_13440	0.12	+0.9
2,903,691	-		OKGIIK_13440	0.12	-2.2
2,903,691	-		OKGIIK_13440	0.12	-0.5
2,903,691	-		OKGIIK_13440	0.12	+0.2
2,903,691	-		OKGIIK_13440	0.12	-0.9
2,903,691	-		OKGIIK_13440	0.12	-2.0
2,903,691	-		OKGIIK_13440	0.12	-1.5
2,903,691	-		OKGIIK_13440	0.12	-1.2
2,903,691	-		OKGIIK_13440	0.12	-2.3
2,903,780	+		OKGIIK_13440	0.18	-0.1
2,903,781	-		OKGIIK_13440	0.18	-1.8
2,903,867	+		OKGIIK_13440	0.24	-0.1
2,903,868	-		OKGIIK_13440	0.24	-3.0
2,903,868	-		OKGIIK_13440	0.24	-0.5
2,904,038	+		OKGIIK_13440	0.34	+0.2
2,904,038	+		OKGIIK_13440	0.34	-2.1
2,904,039	-		OKGIIK_13440	0.34	+0.2
2,904,039	-		OKGIIK_13440	0.34	-2.9
2,904,349	+		OKGIIK_13440	0.54	+0.3
2,904,365	+		OKGIIK_13440	0.55	-2.7
2,904,365	+		OKGIIK_13440	0.55	-0.3
2,904,365	+		OKGIIK_13440	0.55	+1.6
2,904,365	+		OKGIIK_13440	0.55	+0.7
2,904,365	+		OKGIIK_13440	0.55	-0.5
2,904,365	+		OKGIIK_13440	0.55	+0.7
2,904,366	-		OKGIIK_13440	0.55	-2.2
2,904,366	-		OKGIIK_13440	0.55	-0.8
2,904,366	-		OKGIIK_13440	0.55	+0.5
2,904,374	+		OKGIIK_13440	0.56	-0.9
2,904,374	+		OKGIIK_13440	0.56	-2.0
2,904,374	+		OKGIIK_13440	0.56	-1.3
2,904,374	+		OKGIIK_13440	0.56	+2.3
2,904,375	-		OKGIIK_13440	0.56	-1.3
2,904,519	-		OKGIIK_13440	0.65	-2.7
2,904,519	-		OKGIIK_13440	0.65	-2.0
2,904,519	-		OKGIIK_13440	0.65	+2.3
2,904,619	+		OKGIIK_13440	0.71	+1.5
2,904,619	+		OKGIIK_13440	0.71	-1.1
2,904,619	+		OKGIIK_13440	0.71	+0.5
2,904,619	+		OKGIIK_13440	0.71	-1.6
2,904,619	+		OKGIIK_13440	0.71	+0.3
2,904,619	+		OKGIIK_13440	0.71	-2.3
2,904,619	+		OKGIIK_13440	0.71	-0.5
2,904,620	-		OKGIIK_13440	0.71	-2.5
2,904,620	-		OKGIIK_13440	0.71	-1.8
2,904,620	-		OKGIIK_13440	0.71	-1.3
2,904,620	-		OKGIIK_13440	0.71	+0.1
2,904,620	-		OKGIIK_13440	0.71	-1.7
2,904,620	-		OKGIIK_13440	0.71	-0.9
2,904,620	-		OKGIIK_13440	0.71	-1.5
2,904,620	-		OKGIIK_13440	0.71	-1.0
2,904,637	-		OKGIIK_13440	0.72	-0.5
2,904,825	-		OKGIIK_13440	0.84	+0.3
2,904,825	-		OKGIIK_13440	0.84	-2.9
2,904,825	-		OKGIIK_13440	0.84	-1.5
2,904,859	+		OKGIIK_13440	0.86	+0.3
2,904,899	+		OKGIIK_13440	0.89	-0.3
2,904,912	-		OKGIIK_13440	0.90	-2.2
2,904,912	-		OKGIIK_13440	0.90	-0.5
2,904,921	-				-0.8
2,904,921	-				-1.3
2,904,947	+				+0.1
2,904,947	+				-1.1
2,904,947	+				+1.1
2,904,947	+				-1.2
2,904,947	+				-1.3
2,904,948	-				-1.5
2,904,948	-				+0.1
2,904,948	-				-0.7
2,904,948	-				-0.8
2,904,948	-				+2.1
2,904,966	+				-1.8
2,904,967	-				+0.5
2,904,967	-				-1.1
2,904,967	-				+1.0
2,904,967	-				-1.3
2,904,967	-				-0.5
2,904,974	+				-1.2
2,904,974	+				+1.1
2,904,975	-				-0.5
2,904,975	-				-0.5
2,904,975	-				+0.3
2,904,975	-				-2.0
2,904,975	-				-0.4
2,904,975	-				-1.2
2,904,983	+				-0.4
2,904,984	-				+1.1
2,905,086	+				+0.7
2,905,086	+				+1.6
2,905,086	+				+1.0
2,905,086	+				+0.5
2,905,086	+				+0.0
2,905,086	+				-2.7
2,905,086	+				+0.5
2,905,086	+				+0.7
2,905,086	+				-0.7
2,905,302	-		OKGIIK_13445	0.44	+1.0
2,905,302	-		OKGIIK_13445	0.44	+0.0
2,905,382	+		OKGIIK_13445	0.61	-1.3
2,905,382	+		OKGIIK_13445	0.61	-0.8
2,905,382	+		OKGIIK_13445	0.61	+0.2
2,905,382	+		OKGIIK_13445	0.61	-0.8
2,905,382	+		OKGIIK_13445	0.61	-0.3
2,905,382	+		OKGIIK_13445	0.61	-2.1
2,905,382	+		OKGIIK_13445	0.61	-0.3
2,905,382	+		OKGIIK_13445	0.61	-0.7
2,905,382	+		OKGIIK_13445	0.61	-2.2
2,905,382	+		OKGIIK_13445	0.61	-0.5
2,905,383	-		OKGIIK_13445	0.61	-0.2
2,905,383	-		OKGIIK_13445	0.61	-1.1
2,905,383	-		OKGIIK_13445	0.61	-0.8
2,905,383	-		OKGIIK_13445	0.61	-1.8
2,905,383	-		OKGIIK_13445	0.61	+0.2
2,905,383	-		OKGIIK_13445	0.61	+0.4
2,905,383	-		OKGIIK_13445	0.61	-2.1
2,905,383	-		OKGIIK_13445	0.61	-0.3
2,905,395	+		OKGIIK_13445	0.64	-1.4
2,905,395	+		OKGIIK_13445	0.64	-0.5
2,905,396	-		OKGIIK_13445	0.64	-0.5
2,905,396	-		OKGIIK_13445	0.64	-2.3
2,905,396	-		OKGIIK_13445	0.64	-1.7
2,905,414	+		OKGIIK_13445	0.68	+0.2
2,905,415	-		OKGIIK_13445	0.68	+0.2
2,905,436	+		OKGIIK_13445	0.72	-1.3
2,905,437	-		OKGIIK_13445	0.73	-0.2
2,905,519	+				-1.1
2,905,555	+				+0.2
2,905,555	+				-0.5
2,905,555	+				-0.5
2,905,556	-				-1.5
2,905,556	-				-0.8
2,905,556	-				-0.2
2,905,556	-				-0.3
2,905,556	-				+0.7
2,905,556	-				-0.7
2,905,689	+				-0.3
2,905,690	-				-0.2
2,905,690	-				-0.0
2,905,706	+				+1.1
2,905,707	-				-0.6
2,905,707	-				+0.3
2,905,710	+				+0.5
2,905,710	+				+0.7
2,905,710	+				+0.8
2,905,710	+				+0.0
2,905,710	+				+0.1
2,905,711	-				-0.3
2,905,711	-				-1.3
2,905,711	-				-2.4
2,905,711	-				-0.2
2,905,711	-				-1.7
2,905,718	+				+0.6
2,905,718	+				-0.5
2,905,718	+				-1.2
2,905,718	+				+0.1
2,905,718	+				-0.3
2,905,718	+				+0.7
2,905,718	+				-1.8
2,905,719	-				-0.1
2,905,719	-				-1.7
2,905,719	-				+0.5
2,905,719	-				+1.2
2,905,719	-				-1.0
2,905,719	-				-0.6
2,905,719	-				+0.9
2,905,730	+				-0.5
2,905,735	+				-1.7
2,905,736	-				+0.5
2,905,736	-				+1.5
2,905,749	-				+0.2
2,905,749	-				+0.5
2,905,760	+				+0.1
2,905,760	+				-2.1
2,905,896	+				+0.3
2,905,896	+				-0.5
2,905,896	+				-2.0
2,905,896	+				+1.0
2,905,897	-				+0.1
2,905,897	-				+1.7
2,905,897	-				-1.3
2,905,897	-				+1.5
2,905,897	-				+0.5
2,905,897	-				-2.8
2,905,897	-				+0.7
2,905,897	-				-0.1
2,905,897	-				-0.0
2,905,897	-				-0.6
2,905,897	-				+0.5
2,905,897	-				+0.5
2,905,897	-				+2.2
2,905,897	-				-1.0
2,905,897	-				+0.5
2,906,011	+				-0.3
2,906,011	+				-1.3
2,906,011	+				-0.1
2,906,011	+				+0.1
2,906,011	+				-1.7
2,906,011	+				+0.4
2,906,011	+				+1.3
2,906,012	-				+0.5
2,906,012	-				-1.1
2,906,012	-				-0.8
2,906,012	-				+0.5
2,906,012	-				-0.4
2,906,012	-				+1.5
2,906,012	-				-0.5
2,906,012	-				-0.2
2,906,012	-				+1.1