Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06758 and MPMX19_06759 overlap by 4 nucleotides MPMX19_06759 and MPMX19_06760 are separated by 49 nucleotides MPMX19_06760 and MPMX19_06761 are separated by 353 nucleotides
MPMX19_06758: MPMX19_06758 - Putative aliphatic sulfonates transport permease protein SsuC, at 24,029 to 24,910
_06758
MPMX19_06759: MPMX19_06759 - Taurine import ATP-binding protein TauB, at 24,907 to 25,710
_06759
MPMX19_06760: MPMX19_06760 - Taurine-binding periplasmic protein, at 25,760 to 26,767
_06760
MPMX19_06761: MPMX19_06761 - HTH-type transcriptional regulator TauR, at 27,121 to 28,596
_06761
Position (kb) 25
26
27 Strain fitness (log2 ratio) -2
-1
0
1 at 25.319 kb on + strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.679 kb on + strand at 25.679 kb on + strand at 25.680 kb on - strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.806 kb on + strand at 25.806 kb on + strand at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.337 kb on + strand, within MPMX19_06760 at 26.337 kb on + strand, within MPMX19_06760 at 26.338 kb on - strand, within MPMX19_06760 at 26.338 kb on - strand, within MPMX19_06760 at 26.595 kb on + strand, within MPMX19_06760 at 26.595 kb on + strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.653 kb on + strand, within MPMX19_06760 at 26.654 kb on - strand, within MPMX19_06760 at 26.654 kb on - strand, within MPMX19_06760 at 26.661 kb on + strand, within MPMX19_06760 at 26.843 kb on + strand at 26.843 kb on + strand at 26.844 kb on - strand at 27.511 kb on + strand, within MPMX19_06761 at 27.511 kb on + strand, within MPMX19_06761 at 27.512 kb on - strand, within MPMX19_06761 at 27.512 kb on - strand, within MPMX19_06761 at 27.518 kb on - strand, within MPMX19_06761 at 27.518 kb on - strand, within MPMX19_06761
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 25,319 + MPMX19_06759 0.51 +0.6 25,320 - MPMX19_06759 0.51 +1.1 25,320 - MPMX19_06759 0.51 -0.7 25,320 - MPMX19_06759 0.51 +0.9 25,320 - MPMX19_06759 0.51 +0.2 25,320 - MPMX19_06759 0.51 -0.9 25,679 + -1.3 25,679 + -0.9 25,680 - -0.3 25,761 + -0.8 25,761 + +0.6 25,761 + +0.9 25,761 + -1.4 25,761 + -0.9 25,761 + -1.1 25,761 + +0.7 25,762 - +0.1 25,762 - -0.5 25,762 - -0.6 25,762 - +0.1 25,806 + -0.3 25,806 + -0.6 26,325 + MPMX19_06760 0.56 -1.1 26,325 + MPMX19_06760 0.56 -0.5 26,325 + MPMX19_06760 0.56 -0.3 26,325 + MPMX19_06760 0.56 -1.0 26,325 + MPMX19_06760 0.56 -0.3 26,326 - MPMX19_06760 0.56 -1.3 26,326 - MPMX19_06760 0.56 +0.1 26,326 - MPMX19_06760 0.56 -1.6 26,326 - MPMX19_06760 0.56 -1.4 26,326 - MPMX19_06760 0.56 +0.3 26,326 - MPMX19_06760 0.56 -0.9 26,326 - MPMX19_06760 0.56 +0.7 26,337 + MPMX19_06760 0.57 -0.4 26,337 + MPMX19_06760 0.57 -2.2 26,338 - MPMX19_06760 0.57 +0.5 26,338 - MPMX19_06760 0.57 -0.6 26,595 + MPMX19_06760 0.83 -2.1 26,595 + MPMX19_06760 0.83 -1.1 26,596 - MPMX19_06760 0.83 -1.6 26,596 - MPMX19_06760 0.83 -2.3 26,596 - MPMX19_06760 0.83 -0.4 26,653 + MPMX19_06760 0.89 +0.5 26,654 - MPMX19_06760 0.89 +1.7 26,654 - MPMX19_06760 0.89 +0.1 26,661 + MPMX19_06760 0.89 -1.1 26,843 + +0.4 26,843 + -0.6 26,844 - -0.5 27,511 + MPMX19_06761 0.26 -1.7 27,511 + MPMX19_06761 0.26 -0.4 27,512 - MPMX19_06761 0.26 -0.6 27,512 - MPMX19_06761 0.26 -0.4 27,518 - MPMX19_06761 0.27 -1.3 27,518 - MPMX19_06761 0.27 -0.6
Or see this region's nucleotide sequence