Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06750 and MPMX19_06751 are separated by 10 nucleotides MPMX19_06751 and MPMX19_06752 are separated by 17 nucleotides MPMX19_06752 and MPMX19_06753 are separated by 38 nucleotides
MPMX19_06750: MPMX19_06750 - Aliphatic sulfonates import ATP-binding protein SsuB, at 16,227 to 17,006
_06750
MPMX19_06751: MPMX19_06751 - Putative aliphatic sulfonates transport permease protein SsuC, at 17,017 to 17,811
_06751
MPMX19_06752: MPMX19_06752 - hypothetical protein, at 17,829 to 18,836
_06752
MPMX19_06753: MPMX19_06753 - Guanidinopropionase, at 18,875 to 19,891
_06753
Position (kb) 17
18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.018 kb on + strand at 17.018 kb on + strand at 17.159 kb on + strand, within MPMX19_06751 at 17.159 kb on + strand, within MPMX19_06751 at 17.160 kb on - strand, within MPMX19_06751 at 17.160 kb on - strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.238 kb on + strand, within MPMX19_06751 at 17.312 kb on + strand, within MPMX19_06751 at 17.313 kb on - strand, within MPMX19_06751 at 17.313 kb on - strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.699 kb on + strand, within MPMX19_06751 at 17.699 kb on + strand, within MPMX19_06751 at 17.700 kb on - strand, within MPMX19_06751 at 17.983 kb on + strand, within MPMX19_06752 at 18.119 kb on - strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.677 kb on - strand, within MPMX19_06752 at 18.850 kb on + strand at 18.851 kb on - strand at 18.851 kb on - strand at 19.134 kb on + strand, within MPMX19_06753 at 19.134 kb on + strand, within MPMX19_06753 at 19.134 kb on + strand, within MPMX19_06753 at 19.135 kb on - strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.312 kb on - strand, within MPMX19_06753 at 19.312 kb on - strand, within MPMX19_06753 at 19.353 kb on + strand, within MPMX19_06753 at 19.353 kb on + strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.371 kb on + strand, within MPMX19_06753 at 19.372 kb on - strand, within MPMX19_06753 at 19.372 kb on - strand, within MPMX19_06753 at 19.452 kb on + strand, within MPMX19_06753 at 19.515 kb on + strand, within MPMX19_06753 at 19.515 kb on + strand, within MPMX19_06753 at 19.803 kb on + strand at 19.803 kb on + strand at 19.803 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 17,018 + -0.0 17,018 + -1.1 17,159 + MPMX19_06751 0.18 -0.8 17,159 + MPMX19_06751 0.18 -0.7 17,160 - MPMX19_06751 0.18 +1.1 17,160 - MPMX19_06751 0.18 -1.4 17,204 + MPMX19_06751 0.24 +0.2 17,204 + MPMX19_06751 0.24 -0.3 17,204 + MPMX19_06751 0.24 -0.3 17,204 + MPMX19_06751 0.24 +1.7 17,204 + MPMX19_06751 0.24 +0.1 17,205 - MPMX19_06751 0.24 -0.9 17,205 - MPMX19_06751 0.24 -0.4 17,205 - MPMX19_06751 0.24 -0.6 17,205 - MPMX19_06751 0.24 +0.9 17,205 - MPMX19_06751 0.24 -1.4 17,238 + MPMX19_06751 0.28 +0.1 17,312 + MPMX19_06751 0.37 -1.6 17,313 - MPMX19_06751 0.37 +0.3 17,313 - MPMX19_06751 0.37 -0.6 17,471 + MPMX19_06751 0.57 +0.1 17,471 + MPMX19_06751 0.57 -0.9 17,471 + MPMX19_06751 0.57 -0.6 17,471 + MPMX19_06751 0.57 -1.3 17,471 + MPMX19_06751 0.57 +0.5 17,471 + MPMX19_06751 0.57 -1.1 17,472 - MPMX19_06751 0.57 +2.0 17,472 - MPMX19_06751 0.57 +0.1 17,472 - MPMX19_06751 0.57 -2.2 17,472 - MPMX19_06751 0.57 +0.7 17,472 - MPMX19_06751 0.57 -0.0 17,472 - MPMX19_06751 0.57 +1.4 17,472 - MPMX19_06751 0.57 +0.1 17,699 + MPMX19_06751 0.86 -1.1 17,699 + MPMX19_06751 0.86 -0.7 17,700 - MPMX19_06751 0.86 -0.5 17,983 + MPMX19_06752 0.15 +0.3 18,119 - MPMX19_06752 0.29 +0.7 18,505 + MPMX19_06752 0.67 -0.2 18,505 + MPMX19_06752 0.67 -0.3 18,505 + MPMX19_06752 0.67 -0.8 18,505 + MPMX19_06752 0.67 -1.2 18,506 - MPMX19_06752 0.67 +0.7 18,506 - MPMX19_06752 0.67 -1.6 18,506 - MPMX19_06752 0.67 -1.7 18,506 - MPMX19_06752 0.67 +0.5 18,676 + MPMX19_06752 0.84 +0.9 18,676 + MPMX19_06752 0.84 -0.6 18,676 + MPMX19_06752 0.84 +1.7 18,676 + MPMX19_06752 0.84 +1.6 18,676 + MPMX19_06752 0.84 +0.3 18,677 - MPMX19_06752 0.84 -0.7 18,850 + -0.7 18,851 - -1.3 18,851 - +2.3 19,134 + MPMX19_06753 0.25 -0.0 19,134 + MPMX19_06753 0.25 -2.0 19,134 + MPMX19_06753 0.25 +0.1 19,135 - MPMX19_06753 0.26 +0.9 19,263 + MPMX19_06753 0.38 -0.5 19,263 + MPMX19_06753 0.38 -1.1 19,263 + MPMX19_06753 0.38 -0.9 19,263 + MPMX19_06753 0.38 -0.3 19,263 + MPMX19_06753 0.38 +0.4 19,263 + MPMX19_06753 0.38 -2.2 19,263 + MPMX19_06753 0.38 -0.5 19,263 + MPMX19_06753 0.38 +0.1 19,263 + MPMX19_06753 0.38 -1.1 19,263 + MPMX19_06753 0.38 -0.6 19,264 - MPMX19_06753 0.38 +0.5 19,264 - MPMX19_06753 0.38 +0.3 19,264 - MPMX19_06753 0.38 -0.4 19,264 - MPMX19_06753 0.38 -0.8 19,264 - MPMX19_06753 0.38 +0.6 19,264 - MPMX19_06753 0.38 -0.9 19,264 - MPMX19_06753 0.38 +1.1 19,264 - MPMX19_06753 0.38 -1.4 19,312 - MPMX19_06753 0.43 -0.1 19,312 - MPMX19_06753 0.43 -0.5 19,353 + MPMX19_06753 0.47 -0.3 19,353 + MPMX19_06753 0.47 +0.4 19,354 - MPMX19_06753 0.47 +0.6 19,354 - MPMX19_06753 0.47 -0.4 19,354 - MPMX19_06753 0.47 +1.1 19,354 - MPMX19_06753 0.47 +0.5 19,354 - MPMX19_06753 0.47 -0.3 19,371 + MPMX19_06753 0.49 +0.4 19,372 - MPMX19_06753 0.49 -1.3 19,372 - MPMX19_06753 0.49 -0.3 19,452 + MPMX19_06753 0.57 +0.9 19,515 + MPMX19_06753 0.63 -0.2 19,515 + MPMX19_06753 0.63 +0.1 19,803 + +0.2 19,803 + +0.2 19,803 + -0.7
Or see this region's nucleotide sequence