Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06384 and MPMX19_06385 are separated by 313 nucleotides MPMX19_06385 and MPMX19_06386 are separated by 10 nucleotides MPMX19_06386 and MPMX19_06387 are separated by 111 nucleotides MPMX19_06387 and MPMX19_06388 are separated by 9 nucleotides
MPMX19_06384: MPMX19_06384 - Cadmium, cobalt and zinc/H(+)-K(+) antiporter, at 152,667 to 153,656
_06384
MPMX19_06385: MPMX19_06385 - hypothetical protein, at 153,970 to 154,146
_06385
MPMX19_06386: MPMX19_06386 - hypothetical protein, at 154,157 to 154,423
_06386
MPMX19_06387: MPMX19_06387 - hypothetical protein, at 154,535 to 155,488
_06387
MPMX19_06388: MPMX19_06388 - hypothetical protein, at 155,498 to 156,823
_06388
Position (kb) 154
155
156 Strain fitness (log2 ratio) -2
-1
0
1
2 at 153.599 kb on + strand at 153.599 kb on + strand at 153.605 kb on + strand at 153.606 kb on - strand at 153.679 kb on + strand at 153.679 kb on + strand at 153.680 kb on - strand at 153.680 kb on - strand at 153.733 kb on + strand at 153.733 kb on + strand at 153.733 kb on + strand at 153.734 kb on - strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.856 kb on + strand at 153.857 kb on - strand at 153.857 kb on - strand at 153.857 kb on - strand at 153.857 kb on - strand at 153.857 kb on - strand at 153.857 kb on - strand at 153.857 kb on - strand at 153.971 kb on + strand at 153.972 kb on - strand at 154.085 kb on + strand, within MPMX19_06385 at 154.085 kb on + strand, within MPMX19_06385 at 154.085 kb on + strand, within MPMX19_06385 at 154.085 kb on + strand, within MPMX19_06385 at 154.085 kb on + strand, within MPMX19_06385 at 154.086 kb on - strand, within MPMX19_06385 at 154.086 kb on - strand, within MPMX19_06385 at 154.086 kb on - strand, within MPMX19_06385 at 154.086 kb on - strand, within MPMX19_06385 at 154.158 kb on + strand at 154.158 kb on + strand at 154.158 kb on + strand at 154.158 kb on + strand at 154.158 kb on + strand at 154.158 kb on + strand at 154.159 kb on - strand at 154.159 kb on - strand at 154.159 kb on - strand at 154.164 kb on + strand at 154.165 kb on - strand at 154.165 kb on - strand at 154.165 kb on - strand at 154.249 kb on + strand, within MPMX19_06386 at 154.250 kb on - strand, within MPMX19_06386 at 154.436 kb on - strand at 154.737 kb on + strand, within MPMX19_06387 at 154.737 kb on + strand, within MPMX19_06387 at 154.737 kb on + strand, within MPMX19_06387 at 154.737 kb on + strand, within MPMX19_06387 at 154.737 kb on + strand, within MPMX19_06387 at 154.828 kb on + strand, within MPMX19_06387 at 154.828 kb on + strand, within MPMX19_06387 at 154.829 kb on - strand, within MPMX19_06387 at 155.169 kb on + strand, within MPMX19_06387 at 155.274 kb on - strand, within MPMX19_06387 at 155.349 kb on + strand, within MPMX19_06387 at 155.349 kb on + strand, within MPMX19_06387 at 155.350 kb on - strand, within MPMX19_06387 at 155.350 kb on - strand, within MPMX19_06387 at 155.350 kb on - strand, within MPMX19_06387 at 155.350 kb on - strand, within MPMX19_06387 at 155.379 kb on + strand, within MPMX19_06387 at 155.379 kb on + strand, within MPMX19_06387 at 155.380 kb on - strand, within MPMX19_06387 at 155.421 kb on + strand at 155.421 kb on + strand at 155.422 kb on - strand at 155.422 kb on - strand at 155.422 kb on - strand at 155.754 kb on + strand, within MPMX19_06388 at 155.754 kb on + strand, within MPMX19_06388 at 155.754 kb on + strand, within MPMX19_06388 at 155.755 kb on - strand, within MPMX19_06388 at 155.755 kb on - strand, within MPMX19_06388 at 155.755 kb on - strand, within MPMX19_06388 at 155.755 kb on - strand, within MPMX19_06388 at 155.755 kb on - strand, within MPMX19_06388 at 156.129 kb on + strand, within MPMX19_06388 at 156.192 kb on + strand, within MPMX19_06388 at 156.192 kb on + strand, within MPMX19_06388 at 156.193 kb on - strand, within MPMX19_06388 at 156.193 kb on - strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.222 kb on + strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.223 kb on - strand, within MPMX19_06388 at 156.393 kb on + strand, within MPMX19_06388 at 156.394 kb on - strand, within MPMX19_06388 at 156.426 kb on + strand, within MPMX19_06388 at 156.426 kb on + strand, within MPMX19_06388 at 156.426 kb on + strand, within MPMX19_06388 at 156.426 kb on + strand, within MPMX19_06388 at 156.427 kb on - strand, within MPMX19_06388 at 156.427 kb on - strand, within MPMX19_06388 at 156.427 kb on - strand, within MPMX19_06388 at 156.427 kb on - strand, within MPMX19_06388 at 156.427 kb on - strand, within MPMX19_06388 at 156.427 kb on - strand, within MPMX19_06388
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 153,599 + +0.2 153,599 + -0.1 153,605 + -0.8 153,606 - -1.3 153,679 + -0.3 153,679 + +0.2 153,680 - +0.3 153,680 - +0.3 153,733 + +0.2 153,733 + +0.7 153,733 + +0.1 153,734 - +1.0 153,856 + -0.9 153,856 + -0.4 153,856 + -1.4 153,856 + -0.7 153,856 + +0.6 153,856 + +1.5 153,856 + +0.4 153,856 + -0.6 153,856 + -0.1 153,856 + -0.6 153,856 + -1.3 153,856 + +0.5 153,857 - -0.5 153,857 - -0.8 153,857 - +0.7 153,857 - +0.1 153,857 - -0.6 153,857 - +0.2 153,857 - +0.3 153,971 + +0.6 153,972 - +0.6 154,085 + MPMX19_06385 0.65 -1.7 154,085 + MPMX19_06385 0.65 +0.2 154,085 + MPMX19_06385 0.65 -0.9 154,085 + MPMX19_06385 0.65 +0.3 154,085 + MPMX19_06385 0.65 +0.1 154,086 - MPMX19_06385 0.66 -0.4 154,086 - MPMX19_06385 0.66 -1.7 154,086 - MPMX19_06385 0.66 -0.9 154,086 - MPMX19_06385 0.66 +0.1 154,158 + -0.2 154,158 + -0.9 154,158 + -0.2 154,158 + -0.2 154,158 + -0.1 154,158 + -0.6 154,159 - +0.4 154,159 - +1.3 154,159 - +0.8 154,164 + -1.2 154,165 - -1.2 154,165 - -0.5 154,165 - +0.2 154,249 + MPMX19_06386 0.34 -0.3 154,250 - MPMX19_06386 0.35 -0.4 154,436 - -0.1 154,737 + MPMX19_06387 0.21 -0.2 154,737 + MPMX19_06387 0.21 -1.4 154,737 + MPMX19_06387 0.21 +1.3 154,737 + MPMX19_06387 0.21 +0.6 154,737 + MPMX19_06387 0.21 -0.2 154,828 + MPMX19_06387 0.31 -0.9 154,828 + MPMX19_06387 0.31 +0.1 154,829 - MPMX19_06387 0.31 +1.3 155,169 + MPMX19_06387 0.66 +0.5 155,274 - MPMX19_06387 0.77 +0.3 155,349 + MPMX19_06387 0.85 +0.3 155,349 + MPMX19_06387 0.85 +0.2 155,350 - MPMX19_06387 0.85 -0.8 155,350 - MPMX19_06387 0.85 +1.2 155,350 - MPMX19_06387 0.85 -1.1 155,350 - MPMX19_06387 0.85 -0.2 155,379 + MPMX19_06387 0.88 -1.4 155,379 + MPMX19_06387 0.88 +0.3 155,380 - MPMX19_06387 0.89 -0.6 155,421 + -0.7 155,421 + +0.6 155,422 - -0.2 155,422 - -0.1 155,422 - +0.1 155,754 + MPMX19_06388 0.19 -0.1 155,754 + MPMX19_06388 0.19 -2.1 155,754 + MPMX19_06388 0.19 -1.2 155,755 - MPMX19_06388 0.19 +0.2 155,755 - MPMX19_06388 0.19 +0.6 155,755 - MPMX19_06388 0.19 +0.7 155,755 - MPMX19_06388 0.19 +1.8 155,755 - MPMX19_06388 0.19 +1.9 156,129 + MPMX19_06388 0.48 -0.6 156,192 + MPMX19_06388 0.52 -1.2 156,192 + MPMX19_06388 0.52 +0.3 156,193 - MPMX19_06388 0.52 -1.2 156,193 - MPMX19_06388 0.52 +0.3 156,222 + MPMX19_06388 0.55 +0.3 156,222 + MPMX19_06388 0.55 +0.6 156,222 + MPMX19_06388 0.55 +0.3 156,222 + MPMX19_06388 0.55 -0.8 156,222 + MPMX19_06388 0.55 -0.2 156,222 + MPMX19_06388 0.55 -0.4 156,222 + MPMX19_06388 0.55 +0.9 156,222 + MPMX19_06388 0.55 +0.2 156,222 + MPMX19_06388 0.55 -1.9 156,223 - MPMX19_06388 0.55 +0.7 156,223 - MPMX19_06388 0.55 +0.7 156,223 - MPMX19_06388 0.55 -0.2 156,223 - MPMX19_06388 0.55 -1.4 156,223 - MPMX19_06388 0.55 -1.2 156,223 - MPMX19_06388 0.55 +0.0 156,223 - MPMX19_06388 0.55 +1.3 156,223 - MPMX19_06388 0.55 -0.2 156,393 + MPMX19_06388 0.67 -1.3 156,394 - MPMX19_06388 0.68 -0.7 156,426 + MPMX19_06388 0.70 -0.6 156,426 + MPMX19_06388 0.70 +1.3 156,426 + MPMX19_06388 0.70 -0.2 156,426 + MPMX19_06388 0.70 -1.9 156,427 - MPMX19_06388 0.70 -0.9 156,427 - MPMX19_06388 0.70 -0.3 156,427 - MPMX19_06388 0.70 -1.3 156,427 - MPMX19_06388 0.70 -0.7 156,427 - MPMX19_06388 0.70 -1.2 156,427 - MPMX19_06388 0.70 -1.5
Or see this region's nucleotide sequence