Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06322

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
82,134	+		MPMX19_06321	0.74	+0.1
82,134	+		MPMX19_06321	0.74	-0.3
82,134	+		MPMX19_06321	0.74	+0.1
82,134	+		MPMX19_06321	0.74	-1.4
82,134	+		MPMX19_06321	0.74	-2.0
82,134	+		MPMX19_06321	0.74	-1.2
82,135	-		MPMX19_06321	0.74	+0.9
82,135	-		MPMX19_06321	0.74	-0.2
82,135	-		MPMX19_06321	0.74	-1.1
82,135	-		MPMX19_06321	0.74	-2.1
82,135	-		MPMX19_06321	0.74	-0.5
82,142	+		MPMX19_06321	0.74	+0.7
82,412	-				-0.7
82,483	-				+1.7
82,580	+				+0.9
82,580	+				+0.7
82,580	+				-1.0
82,580	+				+0.8
82,580	+				+0.2
82,580	+				-1.8
82,581	-				-0.7
82,581	-				-0.3
82,581	-				-0.4
82,583	-				-1.1
82,583	-				-0.7
82,950	+				+0.2
82,950	+				-1.5
83,493	+		MPMX19_06322	0.52	-0.3
83,493	+		MPMX19_06322	0.52	-0.9
83,494	-		MPMX19_06322	0.52	+0.6
83,494	-		MPMX19_06322	0.52	-2.4
83,494	-		MPMX19_06322	0.52	-0.7
83,494	-		MPMX19_06322	0.52	-0.5
83,494	-		MPMX19_06322	0.52	+0.2
83,494	-		MPMX19_06322	0.52	+0.5
83,937	+				+0.7
83,938	-				+0.9
83,938	-				+0.9
83,938	-				-0.7
83,978	+				-0.4
83,979	-				-1.3
83,979	-				-1.2
83,996	+				+0.3
84,014	+				-0.1
84,015	-				+0.3
84,142	+				+0.6
84,143	-				-0.7
84,143	-				+0.8
84,143	-				-1.5
84,158	+				-0.4
84,207	+				-1.5
84,208	-				-0.7
84,208	-				-1.7
84,208	-				+0.9
84,208	-				+0.8
84,208	-				-0.1
84,233	+				-1.2
84,233	+				-0.3
84,233	+				-0.3
84,234	-				+0.8
84,285	+				-0.8
84,285	+				-0.2
84,285	+				-0.5
84,286	-				-0.9
84,286	-				-0.0
84,286	-				-1.1
84,291	+				+1.5
84,450	+				+1.9
84,450	+				+0.3
84,450	+				-1.2
84,450	+				-0.8
84,450	+				-0.4
84,450	+				+1.9
84,450	+				-1.1
84,450	+				+0.2
84,450	+				-0.2
84,451	-				+0.9
84,451	-				+0.7
84,451	-				-0.5
84,451	-				-0.3
84,451	-				+0.1
84,451	-				+0.4
84,451	-				-0.5
84,451	-				-1.5
84,451	-				+0.7
84,451	-				-0.5
84,451	-				-0.9
84,451	-				+0.9
84,451	-				-1.5
84,451	-				-0.2
84,451	-				-0.1
84,451	-				-0.4
84,451	-				-0.7
84,451	-				-1.0
84,451	-				+0.6
84,451	-				-0.3
84,451	-				-0.9
84,451	-				-0.9
84,451	-				+0.8
84,452	+				-0.2
84,452	+				+0.1
84,452	+				+0.0
84,452	+				+0.5
84,452	+				-2.6
84,452	+				-1.9
84,452	+				+0.9
84,452	+				+0.1
84,452	+				+0.3
84,452	+				-1.2
84,453	-				-0.3
84,453	-				+0.4
84,453	-				-0.5
84,453	-				+0.2
84,453	-				-0.4
84,453	-				+0.2
84,542	+				-1.1
84,542	+				-0.6
84,542	+				-0.9
84,542	+				-1.2
84,542	+				-0.8
84,542	+				+0.1
84,542	+				-0.5
84,542	+				-2.2
84,542	+				-1.0
84,542	+				+0.1
84,542	+				-0.4
84,543	-				+0.3
84,543	-				-0.8
84,543	-				-0.8
84,543	-				-0.6
84,543	-				-1.2
84,543	-				-1.7
84,543	-				-3.4
84,543	-				-0.1
84,543	-				+0.8
84,543	-				-0.8
84,543	-				-0.2
84,543	-				-1.1
84,582	+				+1.3
84,695	+		MPMX19_06323	0.12	-0.4
84,695	+		MPMX19_06323	0.12	+0.1
84,695	+		MPMX19_06323	0.12	-1.2
84,696	-		MPMX19_06323	0.12	-0.7
84,696	-		MPMX19_06323	0.12	-0.5
84,696	-		MPMX19_06323	0.12	+1.9
84,696	-		MPMX19_06323	0.12	+1.2
84,921	+		MPMX19_06323	0.17	+0.2