Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06183 and MPMX19_06184 are separated by 226 nucleotides MPMX19_06184 and MPMX19_06185 are separated by 193 nucleotides MPMX19_06185 and MPMX19_06186 are separated by 155 nucleotides
MPMX19_06183: MPMX19_06183 - Phosphoglucosamine mutase, at 372,714 to 374,087
_06183
MPMX19_06184: MPMX19_06184 - hypothetical protein, at 374,314 to 375,471
_06184
MPMX19_06185: MPMX19_06185 - hypothetical protein, at 375,665 to 375,964
_06185
MPMX19_06186: MPMX19_06186 - Flagellar biosynthetic protein FlhB, at 376,120 to 377,202
_06186
Position (kb) 374
375
376 Strain fitness (log2 ratio) -2
-1
0
1
2 at 374.110 kb on - strand at 374.275 kb on + strand at 374.275 kb on + strand at 374.275 kb on + strand at 374.275 kb on + strand at 374.276 kb on - strand at 374.276 kb on - strand at 374.276 kb on - strand at 374.276 kb on - strand at 374.276 kb on - strand at 374.315 kb on + strand at 375.637 kb on - strand at 375.666 kb on + strand at 375.666 kb on + strand at 375.666 kb on + strand at 375.666 kb on + strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.949 kb on + strand at 375.949 kb on + strand at 376.002 kb on + strand at 376.012 kb on + strand at 376.012 kb on + strand at 376.013 kb on - strand at 376.013 kb on - strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.188 kb on - strand at 376.188 kb on - strand at 376.188 kb on - strand at 376.188 kb on - strand at 376.361 kb on + strand, within MPMX19_06186 at 376.361 kb on + strand, within MPMX19_06186 at 376.361 kb on + strand, within MPMX19_06186 at 376.361 kb on + strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 374,110 - -0.9 374,275 + -0.4 374,275 + -0.7 374,275 + -0.9 374,275 + +0.3 374,276 - -0.3 374,276 - -1.1 374,276 - +0.8 374,276 - -0.3 374,276 - -1.3 374,315 + +0.3 375,637 - -1.6 375,666 + +0.8 375,666 + -0.9 375,666 + -1.8 375,666 + -1.0 375,667 - -0.3 375,667 - -0.8 375,667 - -1.1 375,667 - +0.4 375,667 - -0.8 375,949 + -0.8 375,949 + -0.9 376,002 + -0.3 376,012 + -0.7 376,012 + +0.4 376,013 - +0.6 376,013 - -0.7 376,098 + +0.8 376,098 + +1.5 376,098 + -0.3 376,098 + +1.3 376,098 + -0.2 376,098 + -1.5 376,098 + +0.1 376,099 - -1.5 376,099 - -0.5 376,099 - +0.7 376,099 - -1.0 376,099 - +0.0 376,099 - +0.8 376,160 + -1.6 376,160 + +0.8 376,160 + -2.0 376,160 + +0.0 376,160 + +1.4 376,160 + -1.5 376,160 + -0.5 376,160 + +0.5 376,160 + +0.0 376,160 + -0.2 376,160 + +0.6 376,160 + +0.3 376,160 + -0.3 376,160 + +0.1 376,160 + -0.3 376,160 + -0.2 376,160 + -0.4 376,160 + -0.8 376,160 + -0.1 376,160 + -1.2 376,160 + +0.5 376,160 + -1.2 376,160 + -0.1 376,160 + -2.1 376,160 + +0.7 376,161 - -1.2 376,161 - -0.1 376,161 - +0.1 376,161 - -0.7 376,161 - -0.2 376,161 - -1.3 376,161 - -0.4 376,161 - -1.2 376,161 - -0.3 376,161 - -0.3 376,161 - +0.3 376,161 - +0.5 376,161 - -0.5 376,161 - -0.7 376,161 - +1.2 376,161 - +1.8 376,161 - -1.6 376,161 - -0.3 376,161 - +0.3 376,161 - -1.6 376,161 - +0.7 376,161 - +0.8 376,161 - -0.1 376,161 - -0.7 376,161 - -0.0 376,161 - -0.0 376,187 + -0.3 376,187 + -1.1 376,187 + -2.2 376,187 + +0.3 376,187 + +0.3 376,188 - +1.3 376,188 - -1.2 376,188 - -1.2 376,188 - -0.6 376,361 + MPMX19_06186 0.22 +2.3 376,361 + MPMX19_06186 0.22 -1.1 376,361 + MPMX19_06186 0.22 +0.3 376,361 + MPMX19_06186 0.22 -0.2 376,362 - MPMX19_06186 0.22 -1.0 376,362 - MPMX19_06186 0.22 +0.3 376,362 - MPMX19_06186 0.22 +0.9 376,362 - MPMX19_06186 0.22 +0.8 376,362 - MPMX19_06186 0.22 -0.4
Or see this region's nucleotide sequence