Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05988

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
142,073	+				+1.3
142,073	+				-0.8
142,073	+				+0.1
142,073	+				-0.4
142,074	-				+0.3
142,074	-				-0.7
142,121	+				+0.3
142,190	-				-1.6
142,190	-				-1.1
142,190	-				-0.1
142,190	-				+1.0
142,192	+				-2.2
142,192	+				+0.9
142,192	+				-0.1
142,192	+				-0.5
142,192	+				-1.5
142,192	+				-0.7
142,192	+				+0.4
142,192	+				-0.1
142,192	+				-2.3
142,192	+				-0.4
142,192	+				-0.1
142,192	+				-2.5
142,192	+				-0.3
142,192	+				+0.2
142,192	+				-0.9
142,192	+				-1.3
142,193	-				+1.4
142,193	-				-0.5
142,193	-				-1.1
142,193	-				+0.6
142,193	-				+0.1
142,193	-				+0.5
142,193	-				-1.3
142,261	+				-1.6
142,436	+		MPMX19_05987	0.38	-0.6
142,436	+		MPMX19_05987	0.38	+0.5
142,436	+		MPMX19_05987	0.38	-0.8
142,436	+		MPMX19_05987	0.38	-0.1
142,437	-		MPMX19_05987	0.38	-0.5
142,437	-		MPMX19_05987	0.38	-0.1
142,437	-		MPMX19_05987	0.38	-1.2
142,437	-		MPMX19_05987	0.38	-1.7
142,508	+		MPMX19_05987	0.55	+0.9
142,509	-		MPMX19_05987	0.55	-0.5
142,586	+		MPMX19_05987	0.73	+0.8
142,586	+		MPMX19_05987	0.73	+0.5
142,586	+		MPMX19_05987	0.73	-1.8
142,586	+		MPMX19_05987	0.73	-1.3
142,587	-		MPMX19_05987	0.73	-0.7
142,587	-		MPMX19_05987	0.73	-0.8
142,587	-		MPMX19_05987	0.73	-0.5
142,587	-		MPMX19_05987	0.73	-0.1
142,587	-		MPMX19_05987	0.73	+0.0
142,587	-		MPMX19_05987	0.73	+0.3
142,587	-		MPMX19_05987	0.73	-0.1
142,587	-		MPMX19_05987	0.73	+0.9
142,587	-		MPMX19_05987	0.73	-1.1
142,679	+				-0.3
142,679	+				+0.6
142,680	-				+0.9
142,680	-				+0.2
142,680	-				+0.5
142,746	+				-0.5
142,747	-				-1.8
142,758	+				-1.2
142,758	+				-1.3
142,758	+				-0.7
142,758	+				-1.7
142,759	-				-0.8
142,759	-				-0.7
142,775	+				-0.5
142,813	-				+0.1
142,849	+				+0.7
142,851	+				-1.7
142,852	-				-2.5
142,970	+				+1.9
142,971	-				-1.3
142,971	-				-0.1
143,371	+		MPMX19_05988	0.21	-0.1
143,371	+		MPMX19_05988	0.21	-0.8
143,371	+		MPMX19_05988	0.21	-1.1
143,371	+		MPMX19_05988	0.21	-1.8
143,371	+		MPMX19_05988	0.21	-2.0
143,371	+		MPMX19_05988	0.21	+0.3
143,371	+		MPMX19_05988	0.21	-0.9
143,371	+		MPMX19_05988	0.21	-0.3
143,371	+		MPMX19_05988	0.21	-0.1
143,371	+		MPMX19_05988	0.21	-1.3
143,371	+		MPMX19_05988	0.21	-1.7
143,372	-		MPMX19_05988	0.21	-0.9
143,372	-		MPMX19_05988	0.21	-1.2
143,396	-		MPMX19_05988	0.22	+0.5
143,407	+		MPMX19_05988	0.23	+0.9
143,407	+		MPMX19_05988	0.23	-1.5
143,407	+		MPMX19_05988	0.23	-0.1
143,407	+		MPMX19_05988	0.23	+0.3
143,407	+		MPMX19_05988	0.23	+0.1
143,407	+		MPMX19_05988	0.23	+0.5
143,407	+		MPMX19_05988	0.23	-1.9
143,407	+		MPMX19_05988	0.23	+0.6
143,408	-		MPMX19_05988	0.23	-0.2
143,408	-		MPMX19_05988	0.23	-0.3
143,408	-		MPMX19_05988	0.23	-0.1
143,408	-		MPMX19_05988	0.23	-1.3
143,408	-		MPMX19_05988	0.23	-0.9
143,493	+		MPMX19_05988	0.27	+1.2
143,494	-		MPMX19_05988	0.27	-1.6
143,518	+		MPMX19_05988	0.29	-0.1
143,518	+		MPMX19_05988	0.29	-1.3
143,518	+		MPMX19_05988	0.29	+0.9
143,518	+		MPMX19_05988	0.29	+0.5
143,518	+		MPMX19_05988	0.29	-0.0
143,518	+		MPMX19_05988	0.29	-1.6
143,518	+		MPMX19_05988	0.29	-0.0
143,518	+		MPMX19_05988	0.29	-0.1
143,518	+		MPMX19_05988	0.29	-0.1
143,519	-		MPMX19_05988	0.29	-0.6
143,519	-		MPMX19_05988	0.29	-0.3
143,519	-		MPMX19_05988	0.29	+0.1
143,519	-		MPMX19_05988	0.29	+0.5
143,519	-		MPMX19_05988	0.29	+1.9
143,519	-		MPMX19_05988	0.29	+0.7
143,519	-		MPMX19_05988	0.29	+0.1
143,519	-		MPMX19_05988	0.29	-1.8
143,519	-		MPMX19_05988	0.29	-0.9
143,519	-		MPMX19_05988	0.29	-0.2
143,519	-		MPMX19_05988	0.29	+0.1
143,519	-		MPMX19_05988	0.29	-0.2
143,519	-		MPMX19_05988	0.29	-0.1
143,519	-		MPMX19_05988	0.29	-1.0
143,599	+		MPMX19_05988	0.33	-0.9
143,599	+		MPMX19_05988	0.33	-0.1
143,599	+		MPMX19_05988	0.33	+0.1
143,599	+		MPMX19_05988	0.33	-0.1
143,599	+		MPMX19_05988	0.33	+0.5
143,599	+		MPMX19_05988	0.33	+0.1
143,599	+		MPMX19_05988	0.33	-0.7
143,599	+		MPMX19_05988	0.33	-1.3
143,599	+		MPMX19_05988	0.33	-1.7
143,599	+		MPMX19_05988	0.33	+0.3
143,599	+		MPMX19_05988	0.33	-0.6
143,600	-		MPMX19_05988	0.33	+0.5
143,600	-		MPMX19_05988	0.33	-1.3
143,600	-		MPMX19_05988	0.33	-1.0
143,600	-		MPMX19_05988	0.33	-0.6
143,600	-		MPMX19_05988	0.33	-0.8
143,600	-		MPMX19_05988	0.33	-0.5
143,600	-		MPMX19_05988	0.33	-0.7
143,600	-		MPMX19_05988	0.33	-0.1
143,600	-		MPMX19_05988	0.33	+0.1
143,758	+		MPMX19_05988	0.42	-0.9
143,988	+		MPMX19_05988	0.54	+0.8
144,262	+		MPMX19_05988	0.68	-0.0
144,262	+		MPMX19_05988	0.68	-1.0
144,262	+		MPMX19_05988	0.68	-0.6
144,262	+		MPMX19_05988	0.68	+0.9
144,262	+		MPMX19_05988	0.68	-0.8
144,262	+		MPMX19_05988	0.68	-0.5
144,262	+		MPMX19_05988	0.68	-1.1
144,262	+		MPMX19_05988	0.68	+0.5
144,262	+		MPMX19_05988	0.68	+0.6
144,262	+		MPMX19_05988	0.68	-0.1
144,262	+		MPMX19_05988	0.68	+0.1
144,263	-		MPMX19_05988	0.68	+0.3
144,263	-		MPMX19_05988	0.68	+0.1
144,263	-		MPMX19_05988	0.68	-2.0
144,263	-		MPMX19_05988	0.68	-2.1
144,263	-		MPMX19_05988	0.68	+1.0
144,263	-		MPMX19_05988	0.68	+0.1
144,263	-		MPMX19_05988	0.68	+0.7
144,263	-		MPMX19_05988	0.68	-0.1
144,263	-		MPMX19_05988	0.68	+1.2
144,263	-		MPMX19_05988	0.68	+1.1
144,263	-		MPMX19_05988	0.68	-0.2
144,397	+		MPMX19_05988	0.76	-0.5
144,397	+		MPMX19_05988	0.76	-0.7
144,397	+		MPMX19_05988	0.76	-1.6
144,397	+		MPMX19_05988	0.76	+0.9
144,397	+		MPMX19_05988	0.76	-1.1
144,397	+		MPMX19_05988	0.76	+0.7
144,397	+		MPMX19_05988	0.76	+0.1
144,398	-		MPMX19_05988	0.76	-0.1
144,398	-		MPMX19_05988	0.76	-0.6
144,398	-		MPMX19_05988	0.76	-1.8
144,398	-		MPMX19_05988	0.76	-1.6
144,398	-		MPMX19_05988	0.76	+0.1
144,398	-		MPMX19_05988	0.76	-0.0
144,398	-		MPMX19_05988	0.76	-0.5
144,398	-		MPMX19_05988	0.76	-0.0
144,398	-		MPMX19_05988	0.76	+1.1
144,493	+		MPMX19_05988	0.81	-1.5
144,493	+		MPMX19_05988	0.81	-1.0
144,493	+		MPMX19_05988	0.81	-1.9
144,493	+		MPMX19_05988	0.81	-1.3
144,493	+		MPMX19_05988	0.81	+1.2
144,493	+		MPMX19_05988	0.81	-1.3
144,494	-		MPMX19_05988	0.81	-2.3
144,494	-		MPMX19_05988	0.81	-1.3
144,494	-		MPMX19_05988	0.81	+0.1
144,494	-		MPMX19_05988	0.81	-2.0
144,494	-		MPMX19_05988	0.81	-1.3
144,494	-		MPMX19_05988	0.81	-1.8
144,494	-		MPMX19_05988	0.81	+0.3
144,553	+		MPMX19_05988	0.84	+1.5
144,553	+		MPMX19_05988	0.84	-1.3
144,554	-		MPMX19_05988	0.84	-0.5
144,554	-		MPMX19_05988	0.84	+0.5
144,554	-		MPMX19_05988	0.84	-0.3
144,622	+		MPMX19_05988	0.88	+0.5
144,622	+		MPMX19_05988	0.88	-0.5
144,622	+		MPMX19_05988	0.88	+1.0
144,622	+		MPMX19_05988	0.88	+0.3
144,622	+		MPMX19_05988	0.88	-1.1
144,622	+		MPMX19_05988	0.88	-0.9
144,622	+		MPMX19_05988	0.88	-0.3
144,622	+		MPMX19_05988	0.88	-1.1
144,622	+		MPMX19_05988	0.88	-0.4
144,623	-		MPMX19_05988	0.88	-0.5
144,623	-		MPMX19_05988	0.88	-0.5
144,623	-		MPMX19_05988	0.88	-0.1
144,623	-		MPMX19_05988	0.88	+0.5
144,623	-		MPMX19_05988	0.88	-0.1
144,623	-		MPMX19_05988	0.88	-0.9
144,623	-		MPMX19_05988	0.88	+1.2
144,623	-		MPMX19_05988	0.88	+0.7
144,623	-		MPMX19_05988	0.88	+0.2
144,733	+				-0.1
144,733	+				+1.9
144,733	+				+0.3
144,733	+				-0.7
144,733	+				-0.6
144,734	-				-0.1
144,734	-				+0.0
144,734	-				+0.0
144,734	-				-0.2
144,734	-				-1.0
144,734	-				-1.7
144,809	+				-0.7
144,809	+				-1.0
144,809	+				+0.2
144,810	-				+1.3
145,104	+		MPMX19_05989	0.27	-0.4
145,104	+		MPMX19_05989	0.27	+1.1
145,105	-		MPMX19_05989	0.27	-1.5
145,105	-		MPMX19_05989	0.27	+0.0
145,561	+		MPMX19_05989	0.77	-0.5
145,561	+		MPMX19_05989	0.77	-0.6
145,561	+		MPMX19_05989	0.77	+1.9
145,561	+		MPMX19_05989	0.77	+2.6
145,562	-		MPMX19_05989	0.77	+0.1
145,562	-		MPMX19_05989	0.77	-1.8
145,562	-		MPMX19_05989	0.77	+1.3
145,562	-		MPMX19_05989	0.77	+0.6
145,833	+				-0.8
145,834	-				-0.6
145,834	-				+0.4