Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05970

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
120,750	+		MPMX19_05969	0.10	+0.1
120,750	+		MPMX19_05969	0.10	-0.3
120,750	+		MPMX19_05969	0.10	+0.6
120,750	+		MPMX19_05969	0.10	-0.7
120,750	+		MPMX19_05969	0.10	-0.3
120,750	+		MPMX19_05969	0.10	+0.5
120,750	+		MPMX19_05969	0.10	+0.6
120,751	-		MPMX19_05969	0.10	-1.5
120,751	-		MPMX19_05969	0.10	+0.5
120,751	-		MPMX19_05969	0.10	-3.0
120,751	-		MPMX19_05969	0.10	+0.2
120,751	-		MPMX19_05969	0.10	+0.7
120,751	-		MPMX19_05969	0.10	+0.4
120,915	+		MPMX19_05969	0.25	-0.4
120,915	+		MPMX19_05969	0.25	-2.2
120,915	+		MPMX19_05969	0.25	-0.5
120,915	+		MPMX19_05969	0.25	+0.2
120,915	+		MPMX19_05969	0.25	-0.1
120,915	+		MPMX19_05969	0.25	-1.9
120,915	+		MPMX19_05969	0.25	-0.0
120,915	+		MPMX19_05969	0.25	-0.8
120,915	+		MPMX19_05969	0.25	-1.3
120,915	+		MPMX19_05969	0.25	-0.5
120,915	+		MPMX19_05969	0.25	+0.6
120,915	+		MPMX19_05969	0.25	-2.5
120,915	+		MPMX19_05969	0.25	-0.7
120,915	+		MPMX19_05969	0.25	-0.7
120,915	+		MPMX19_05969	0.25	-0.3
120,915	+		MPMX19_05969	0.25	-0.2
120,915	+		MPMX19_05969	0.25	-1.3
120,915	+		MPMX19_05969	0.25	-0.3
120,915	+		MPMX19_05969	0.25	-0.5
120,915	+		MPMX19_05969	0.25	-0.2
120,916	-		MPMX19_05969	0.25	-1.8
120,916	-		MPMX19_05969	0.25	+1.9
120,916	-		MPMX19_05969	0.25	-0.2
120,916	-		MPMX19_05969	0.25	-0.7
120,916	-		MPMX19_05969	0.25	+0.9
120,916	-		MPMX19_05969	0.25	-1.3
120,916	-		MPMX19_05969	0.25	-0.5
120,916	-		MPMX19_05969	0.25	-0.3
120,916	-		MPMX19_05969	0.25	-0.9
120,916	-		MPMX19_05969	0.25	+0.9
120,916	-		MPMX19_05969	0.25	-0.8
120,916	-		MPMX19_05969	0.25	-1.0
120,933	+		MPMX19_05969	0.27	+0.5
120,933	+		MPMX19_05969	0.27	+0.9
120,933	+		MPMX19_05969	0.27	-1.8
120,934	-		MPMX19_05969	0.27	-0.8
120,934	-		MPMX19_05969	0.27	-0.9
120,934	-		MPMX19_05969	0.27	-0.4
121,206	+		MPMX19_05969	0.52	+0.6
121,206	+		MPMX19_05969	0.52	-0.5
121,207	-		MPMX19_05969	0.52	+0.1
121,207	-		MPMX19_05969	0.52	-0.8
121,207	-		MPMX19_05969	0.52	+1.3
121,224	+		MPMX19_05969	0.54	-0.1
121,224	+		MPMX19_05969	0.54	+1.1
121,224	+		MPMX19_05969	0.54	-1.3
121,224	+		MPMX19_05969	0.54	-2.5
121,224	+		MPMX19_05969	0.54	-1.1
121,224	+		MPMX19_05969	0.54	+0.2
121,224	+		MPMX19_05969	0.54	+0.6
121,224	+		MPMX19_05969	0.54	-0.4
121,224	+		MPMX19_05969	0.54	-0.7
121,224	+		MPMX19_05969	0.54	+0.4
121,224	+		MPMX19_05969	0.54	+0.8
121,224	+		MPMX19_05969	0.54	-0.1
121,224	+		MPMX19_05969	0.54	-0.7
121,224	+		MPMX19_05969	0.54	-1.7
121,224	+		MPMX19_05969	0.54	-2.0
121,224	+		MPMX19_05969	0.54	+1.9
121,225	-		MPMX19_05969	0.54	+0.8
121,225	-		MPMX19_05969	0.54	-0.6
121,225	-		MPMX19_05969	0.54	+1.4
121,225	-		MPMX19_05969	0.54	-0.7
121,225	-		MPMX19_05969	0.54	-0.0
121,225	-		MPMX19_05969	0.54	-0.5
121,225	-		MPMX19_05969	0.54	+0.4
121,225	-		MPMX19_05969	0.54	-0.7
121,225	-		MPMX19_05969	0.54	-1.7
121,225	-		MPMX19_05969	0.54	+0.8
121,225	-		MPMX19_05969	0.54	-0.6
121,225	-		MPMX19_05969	0.54	+1.1
121,225	-		MPMX19_05969	0.54	+0.9
121,225	-		MPMX19_05969	0.54	-1.1
121,225	-		MPMX19_05969	0.54	-0.5
121,225	-		MPMX19_05969	0.54	-0.1
121,225	-		MPMX19_05969	0.54	-1.1
121,225	-		MPMX19_05969	0.54	-0.0
121,225	-		MPMX19_05969	0.54	+1.1
121,225	-		MPMX19_05969	0.54	-0.2
121,225	-		MPMX19_05969	0.54	-1.1
121,281	+		MPMX19_05969	0.59	-0.7
121,281	+		MPMX19_05969	0.59	+0.5
121,281	+		MPMX19_05969	0.59	+0.5
121,281	+		MPMX19_05969	0.59	-1.6
121,281	+		MPMX19_05969	0.59	+0.3
121,281	+		MPMX19_05969	0.59	-0.3
121,281	+		MPMX19_05969	0.59	-0.4
121,281	+		MPMX19_05969	0.59	-1.1
121,281	+		MPMX19_05969	0.59	-1.0
121,281	+		MPMX19_05969	0.59	-1.1
121,281	+		MPMX19_05969	0.59	+0.3
121,282	-		MPMX19_05969	0.59	+0.2
121,282	-		MPMX19_05969	0.59	-0.9
121,282	-		MPMX19_05969	0.59	-1.4
121,282	-		MPMX19_05969	0.59	-1.5
121,282	-		MPMX19_05969	0.59	+0.2
121,282	-		MPMX19_05969	0.59	+0.1
121,282	-		MPMX19_05969	0.59	-1.4
121,282	-		MPMX19_05969	0.59	-0.5
121,282	-		MPMX19_05969	0.59	+1.9
121,282	-		MPMX19_05969	0.59	+0.5
121,282	-		MPMX19_05969	0.59	-0.2
121,282	-		MPMX19_05969	0.59	-0.5
121,282	-		MPMX19_05969	0.59	+0.6
121,282	-		MPMX19_05969	0.59	-0.9
121,282	-		MPMX19_05969	0.59	+1.4
121,282	-		MPMX19_05969	0.59	+0.2
121,354	-		MPMX19_05969	0.66	-1.5
121,354	-		MPMX19_05969	0.66	+0.1
121,354	-		MPMX19_05969	0.66	-0.4
121,354	-		MPMX19_05969	0.66	-0.5
121,701	+				-1.6
121,701	+				-0.5
121,747	+				+0.1
121,748	-				+0.2
121,748	-				+0.9
121,748	-				-0.5
121,841	+		MPMX19_05970	0.11	-0.5
121,841	+		MPMX19_05970	0.11	+2.5
121,841	+		MPMX19_05970	0.11	+0.5
121,842	-		MPMX19_05970	0.11	-2.6
121,842	-		MPMX19_05970	0.11	+1.1
121,842	-		MPMX19_05970	0.11	-0.1
121,842	-		MPMX19_05970	0.11	-0.5
121,842	-		MPMX19_05970	0.11	+0.1
121,955	+		MPMX19_05970	0.24	-2.1
121,956	-		MPMX19_05970	0.24	+0.3
121,956	-		MPMX19_05970	0.24	+0.3
122,032	+		MPMX19_05970	0.33	-1.0
122,033	-		MPMX19_05970	0.33	-0.9
122,033	-		MPMX19_05970	0.33	-0.4
122,033	-		MPMX19_05970	0.33	+0.1
122,168	+		MPMX19_05970	0.49	-0.9
122,168	+		MPMX19_05970	0.49	+2.5
122,168	+		MPMX19_05970	0.49	-1.8
122,168	+		MPMX19_05970	0.49	-0.6
122,169	-		MPMX19_05970	0.49	-0.8
122,174	+		MPMX19_05970	0.49	+0.5
122,174	+		MPMX19_05970	0.49	+0.5
122,174	+		MPMX19_05970	0.49	-0.9
122,174	+		MPMX19_05970	0.49	-0.1
122,174	+		MPMX19_05970	0.49	-0.8
122,174	+		MPMX19_05970	0.49	+0.7
122,174	+		MPMX19_05970	0.49	-0.7
122,174	+		MPMX19_05970	0.49	-0.3
122,174	+		MPMX19_05970	0.49	-0.4
122,174	+		MPMX19_05970	0.49	-0.1
122,174	+		MPMX19_05970	0.49	-1.1
122,174	+		MPMX19_05970	0.49	-0.3
122,174	+		MPMX19_05970	0.49	-0.3
122,174	+		MPMX19_05970	0.49	-0.7
122,175	-		MPMX19_05970	0.49	-1.6
122,175	-		MPMX19_05970	0.49	-0.9
122,175	-		MPMX19_05970	0.49	-1.5
122,175	-		MPMX19_05970	0.49	-0.5
122,175	-		MPMX19_05970	0.49	-0.6
122,175	-		MPMX19_05970	0.49	-1.1
122,175	-		MPMX19_05970	0.49	+0.5
122,175	-		MPMX19_05970	0.49	-2.0
122,258	+		MPMX19_05970	0.59	+0.3
122,259	-		MPMX19_05970	0.59	-0.5
122,291	+		MPMX19_05970	0.63	+1.1
122,291	+		MPMX19_05970	0.63	-0.3
122,291	+		MPMX19_05970	0.63	-0.9
122,292	-		MPMX19_05970	0.63	-0.9
122,292	-		MPMX19_05970	0.63	+1.0
122,292	-		MPMX19_05970	0.63	-0.7
122,292	-		MPMX19_05970	0.63	-0.2
122,292	-		MPMX19_05970	0.63	-0.5
122,292	-		MPMX19_05970	0.63	-1.0
122,292	-		MPMX19_05970	0.63	+0.5
122,339	+		MPMX19_05970	0.68	+1.6
122,339	+		MPMX19_05970	0.68	-0.9
122,339	+		MPMX19_05970	0.68	-1.0
122,340	-		MPMX19_05970	0.68	+1.5
122,340	-		MPMX19_05970	0.68	-0.3
122,340	-		MPMX19_05970	0.68	-0.6
122,414	+		MPMX19_05970	0.77	-0.9
122,414	+		MPMX19_05970	0.77	-1.0
122,414	+		MPMX19_05970	0.77	+0.9
122,414	+		MPMX19_05970	0.77	-0.3
122,414	+		MPMX19_05970	0.77	-1.0
122,414	+		MPMX19_05970	0.77	+0.0
122,415	-		MPMX19_05970	0.77	-1.1
122,415	-		MPMX19_05970	0.77	+0.2
122,415	-		MPMX19_05970	0.77	+0.9
122,415	-		MPMX19_05970	0.77	+0.1
122,477	+		MPMX19_05970	0.84	+0.9
122,478	-		MPMX19_05970	0.84	-2.6
122,478	-		MPMX19_05970	0.84	-0.7
122,540	+				-0.7
122,540	+				-0.7
122,540	+				-0.5
122,541	-				-1.9
122,541	-				+0.6
122,541	-				-0.5
122,541	-				+1.1
122,541	-				+0.9
122,541	-				-0.5
122,576	+				+0.1
122,576	+				-0.5
122,576	+				-1.3
122,577	-				-1.1
122,577	-				-2.4
122,577	-				-1.0
122,577	-				-0.1
122,577	-				-1.3
122,577	-				-0.0
122,577	-				-0.6
122,577	-				+0.9
122,577	-				-0.4
122,716	+		MPMX19_05971	0.12	-3.3
122,717	-		MPMX19_05971	0.12	+1.1
122,717	-		MPMX19_05971	0.12	-0.9
122,717	-		MPMX19_05971	0.12	-0.5
122,717	-		MPMX19_05971	0.12	-0.5
122,717	-		MPMX19_05971	0.12	+0.3
122,717	-		MPMX19_05971	0.12	-0.6
122,717	-		MPMX19_05971	0.12	-1.3
122,720	+		MPMX19_05971	0.12	-0.6
122,720	+		MPMX19_05971	0.12	-1.1
122,721	-		MPMX19_05971	0.12	-0.1
122,743	+		MPMX19_05971	0.15	-0.4
122,743	+		MPMX19_05971	0.15	-1.5
122,743	+		MPMX19_05971	0.15	-0.1
122,744	-		MPMX19_05971	0.15	-1.8
122,744	-		MPMX19_05971	0.15	-1.5
122,744	-		MPMX19_05971	0.15	-0.9
122,744	-		MPMX19_05971	0.15	+0.5
122,804	-		MPMX19_05971	0.22	-0.1
122,830	+		MPMX19_05971	0.25	+0.1
122,830	+		MPMX19_05971	0.25	-0.1
122,830	+		MPMX19_05971	0.25	+0.3
122,830	+		MPMX19_05971	0.25	-0.7
122,831	-		MPMX19_05971	0.25	-1.1
122,831	-		MPMX19_05971	0.25	-0.5
122,831	-		MPMX19_05971	0.25	-0.8
122,831	-		MPMX19_05971	0.25	+0.2
122,861	-		MPMX19_05971	0.28	-0.4
122,861	-		MPMX19_05971	0.28	-0.2
122,869	+		MPMX19_05971	0.29	-1.1
122,869	+		MPMX19_05971	0.29	-2.0
122,870	-		MPMX19_05971	0.29	-1.0
122,884	+		MPMX19_05971	0.31	-0.1
122,884	+		MPMX19_05971	0.31	-1.5
122,884	+		MPMX19_05971	0.31	-0.5
122,884	+		MPMX19_05971	0.31	-0.2
122,884	+		MPMX19_05971	0.31	-0.6
122,884	+		MPMX19_05971	0.31	-1.4
122,884	+		MPMX19_05971	0.31	-0.7
122,884	+		MPMX19_05971	0.31	-0.0
122,884	+		MPMX19_05971	0.31	+0.5
122,884	+		MPMX19_05971	0.31	-0.8
122,884	+		MPMX19_05971	0.31	-0.2
122,885	-		MPMX19_05971	0.31	-1.2
122,885	-		MPMX19_05971	0.31	+0.2
122,885	-		MPMX19_05971	0.31	-1.4
122,885	-		MPMX19_05971	0.31	-0.9
122,885	-		MPMX19_05971	0.31	-1.1
122,885	-		MPMX19_05971	0.31	-0.1
122,885	-		MPMX19_05971	0.31	-0.1
122,885	-		MPMX19_05971	0.31	+1.0
122,885	-		MPMX19_05971	0.31	-0.6
122,885	-		MPMX19_05971	0.31	-0.5
122,885	-		MPMX19_05971	0.31	+0.2
122,887	+		MPMX19_05971	0.31	-2.5
122,887	+		MPMX19_05971	0.31	+0.9
122,887	+		MPMX19_05971	0.31	+0.6
122,887	+		MPMX19_05971	0.31	-0.2
122,887	+		MPMX19_05971	0.31	-0.5
122,887	+		MPMX19_05971	0.31	+0.7
122,887	+		MPMX19_05971	0.31	-1.0
122,887	+		MPMX19_05971	0.31	+1.9
122,887	+		MPMX19_05971	0.31	-2.9
122,888	-		MPMX19_05971	0.31	+0.8
122,888	-		MPMX19_05971	0.31	+1.3
122,888	-		MPMX19_05971	0.31	-0.9
122,888	-		MPMX19_05971	0.31	-2.2
122,888	-		MPMX19_05971	0.31	-0.5
122,888	-		MPMX19_05971	0.31	+0.4
122,938	+		MPMX19_05971	0.37	-0.7
122,938	+		MPMX19_05971	0.37	-0.2
122,938	+		MPMX19_05971	0.37	+1.1
122,938	+		MPMX19_05971	0.37	-1.0
122,938	+		MPMX19_05971	0.37	+0.5
122,939	-		MPMX19_05971	0.37	+1.0
122,939	-		MPMX19_05971	0.37	+1.4
123,046	+		MPMX19_05971	0.50	-0.8
123,046	+		MPMX19_05971	0.50	-1.3
123,046	+		MPMX19_05971	0.50	+1.1
123,047	-		MPMX19_05971	0.50	-1.1
123,047	-		MPMX19_05971	0.50	-0.1
123,047	-		MPMX19_05971	0.50	-0.1
123,047	-		MPMX19_05971	0.50	-1.8
123,047	-		MPMX19_05971	0.50	+0.3
123,178	+		MPMX19_05971	0.65	+0.5
123,178	+		MPMX19_05971	0.65	-0.6
123,178	+		MPMX19_05971	0.65	-0.7
123,178	+		MPMX19_05971	0.65	+0.4
123,178	+		MPMX19_05971	0.65	-0.1
123,178	+		MPMX19_05971	0.65	-1.1
123,178	+		MPMX19_05971	0.65	+0.9
123,178	+		MPMX19_05971	0.65	-0.1
123,178	+		MPMX19_05971	0.65	-0.7
123,179	-		MPMX19_05971	0.65	-1.5
123,179	-		MPMX19_05971	0.65	+0.4
123,179	-		MPMX19_05971	0.65	+0.6
123,179	-		MPMX19_05971	0.65	+0.9
123,179	-		MPMX19_05971	0.65	+0.0
123,179	-		MPMX19_05971	0.65	-2.6
123,179	-		MPMX19_05971	0.65	-0.4
123,179	-		MPMX19_05971	0.65	+1.1
123,179	-		MPMX19_05971	0.65	-2.5
123,190	+		MPMX19_05971	0.66	+0.1
123,191	-		MPMX19_05971	0.66	-0.7
123,448	+				-1.9
123,448	+				-2.6
123,448	+				-0.6
123,448	+				+0.5
123,448	+				-0.4
123,448	+				-1.2
123,448	+				-0.7
123,448	+				-1.8
123,448	+				-0.9
123,448	+				-0.9
123,448	+				-0.5
123,449	-				-0.6
123,449	-				-0.3
123,449	-				-0.3
123,449	-				-0.3
123,449	-				-0.3
123,449	-				-0.1
123,449	-				+0.0
123,449	-				+1.2
123,449	-				+1.7
123,449	-				-0.2
123,449	-				+1.2
123,449	-				+1.1
123,449	-				-2.5
123,449	-				-1.8
123,502	+				-0.1
123,503	-				+0.9