Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05964

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
112,378	+		MPMX19_05963	0.61	-0.8
112,379	-		MPMX19_05963	0.62	+1.1
112,379	-		MPMX19_05963	0.62	-1.1
112,379	-		MPMX19_05963	0.62	+0.9
112,483	+		MPMX19_05963	0.67	-1.0
112,483	+		MPMX19_05963	0.67	-1.8
112,483	+		MPMX19_05963	0.67	+0.9
112,484	-		MPMX19_05963	0.67	+0.3
112,484	-		MPMX19_05963	0.67	+0.1
112,484	-		MPMX19_05963	0.67	-1.2
112,648	+		MPMX19_05963	0.76	-0.4
112,648	+		MPMX19_05963	0.76	+0.4
112,757	+		MPMX19_05963	0.82	+0.3
112,757	+		MPMX19_05963	0.82	+0.3
112,757	+		MPMX19_05963	0.82	-0.8
112,757	+		MPMX19_05963	0.82	+0.1
112,757	+		MPMX19_05963	0.82	-0.1
112,757	+		MPMX19_05963	0.82	-2.3
112,757	+		MPMX19_05963	0.82	-1.2
112,757	+		MPMX19_05963	0.82	-0.0
112,757	+		MPMX19_05963	0.82	-1.5
112,758	-		MPMX19_05963	0.82	-0.3
112,758	-		MPMX19_05963	0.82	+1.9
112,758	-		MPMX19_05963	0.82	+0.4
112,760	+		MPMX19_05963	0.82	-0.5
112,760	+		MPMX19_05963	0.82	+0.1
112,760	+		MPMX19_05963	0.82	-0.1
112,760	+		MPMX19_05963	0.82	-1.8
112,760	+		MPMX19_05963	0.82	-0.3
112,760	+		MPMX19_05963	0.82	-1.3
112,760	+		MPMX19_05963	0.82	-0.0
112,760	+		MPMX19_05963	0.82	-1.0
112,760	+		MPMX19_05963	0.82	-2.8
112,760	+		MPMX19_05963	0.82	+0.6
112,760	+		MPMX19_05963	0.82	+0.4
112,760	+		MPMX19_05963	0.82	-0.1
112,760	+		MPMX19_05963	0.82	-0.1
112,760	+		MPMX19_05963	0.82	-1.9
112,760	+		MPMX19_05963	0.82	+1.2
112,760	+		MPMX19_05963	0.82	-0.5
112,760	+		MPMX19_05963	0.82	+0.5
112,761	-		MPMX19_05963	0.82	+0.3
112,761	-		MPMX19_05963	0.82	-1.7
112,761	-		MPMX19_05963	0.82	-0.5
112,761	-		MPMX19_05963	0.82	+0.4
112,761	-		MPMX19_05963	0.82	+0.9
112,761	-		MPMX19_05963	0.82	-2.1
112,780	+		MPMX19_05963	0.83	+0.3
112,780	+		MPMX19_05963	0.83	-1.7
112,780	+		MPMX19_05963	0.83	-0.7
112,780	+		MPMX19_05963	0.83	-0.3
112,780	+		MPMX19_05963	0.83	-0.6
112,780	+		MPMX19_05963	0.83	-0.1
112,780	+		MPMX19_05963	0.83	+0.2
112,780	+		MPMX19_05963	0.83	-1.6
112,780	+		MPMX19_05963	0.83	+0.7
112,780	+		MPMX19_05963	0.83	-2.2
112,780	+		MPMX19_05963	0.83	+0.9
112,780	+		MPMX19_05963	0.83	-0.7
112,780	+		MPMX19_05963	0.83	-0.1
112,780	+		MPMX19_05963	0.83	-0.7
112,780	+		MPMX19_05963	0.83	-1.6
112,780	+		MPMX19_05963	0.83	-0.0
112,781	-		MPMX19_05963	0.83	-0.1
112,781	-		MPMX19_05963	0.83	-0.5
112,781	-		MPMX19_05963	0.83	+0.5
112,781	-		MPMX19_05963	0.83	+0.4
112,781	-		MPMX19_05963	0.83	+0.3
112,781	-		MPMX19_05963	0.83	-0.6
112,781	-		MPMX19_05963	0.83	-0.1
112,781	-		MPMX19_05963	0.83	-1.6
112,954	+				+0.1
112,954	+				-1.2
112,954	+				+0.1
112,954	+				+0.1
112,954	+				-1.3
112,954	+				-2.5
112,954	+				-1.9
112,954	+				-0.7
112,955	-				+0.2
112,955	-				+0.3
112,955	-				+0.3
112,955	-				-0.0
112,955	-				-0.9
112,955	-				+0.1
112,955	-				+0.3
112,955	-				-1.5
112,996	+				-0.8
112,996	+				-1.5
112,996	+				+0.3
112,996	+				-0.1
112,996	+				+0.2
112,997	-				+0.0
112,997	-				-1.1
112,997	-				-0.6
112,997	-				+0.2
112,997	-				-0.9
112,997	-				-0.9
112,997	-				-1.5
113,105	+				-1.1
113,105	+				-0.3
113,105	+				-0.9
113,105	+				-0.0
113,105	+				+0.9
113,105	+				-1.2
113,105	+				+0.1
113,105	+				-1.5
113,106	-				-0.5
113,106	-				-1.8
113,106	-				-0.6
113,106	-				-0.1
113,106	-				-0.1
113,106	-				-0.4
113,106	-				-0.5
113,106	-				+0.9
113,106	-				-1.3
113,106	-				+0.3
113,106	-				+0.9
113,154	+				-0.7
113,154	+				+0.1
113,154	+				-0.3
113,330	+				+0.1
113,330	+				-1.2
113,330	+				-1.0
113,330	+				-0.6
113,330	+				-1.1
113,330	+				+0.5
113,330	+				+0.8
113,330	+				+0.0
113,330	+				-0.8
113,330	+				-1.2
113,330	+				-0.9
113,330	+				+0.2
113,330	+				+0.1
113,330	+				-1.4
113,331	-				+0.3
113,331	-				+0.4
113,331	-				-1.0
113,331	-				+0.9
113,331	-				+0.5
113,331	-				-1.5
113,331	-				+1.3
113,331	-				-0.5
113,331	-				-0.6
113,331	-				-1.0
113,331	-				+0.6
113,331	-				-2.0
113,331	-				-0.6
113,331	-				-0.1
113,331	-				-1.3
113,331	-				-0.5
113,331	-				-0.5
113,331	-				-1.2
113,393	+		MPMX19_05964	0.14	-1.0
113,393	+		MPMX19_05964	0.14	+0.3
113,429	+		MPMX19_05964	0.17	+0.9
113,429	+		MPMX19_05964	0.17	-0.3
113,429	+		MPMX19_05964	0.17	+0.5
113,429	+		MPMX19_05964	0.17	-0.4
113,430	-		MPMX19_05964	0.18	+0.4
113,450	+		MPMX19_05964	0.19	-2.7
113,450	+		MPMX19_05964	0.19	-0.5
113,451	-		MPMX19_05964	0.20	+0.5
113,451	-		MPMX19_05964	0.20	-1.3
113,451	-		MPMX19_05964	0.20	+1.3
113,451	-		MPMX19_05964	0.20	-1.5
113,451	-		MPMX19_05964	0.20	-0.0
113,451	-		MPMX19_05964	0.20	-0.6
113,451	-		MPMX19_05964	0.20	-0.7
113,451	-		MPMX19_05964	0.20	-0.7
113,451	-		MPMX19_05964	0.20	-2.0
113,483	+		MPMX19_05964	0.23	-0.5
113,483	+		MPMX19_05964	0.23	+0.3
113,483	+		MPMX19_05964	0.23	+1.1
113,483	+		MPMX19_05964	0.23	-0.9
113,483	+		MPMX19_05964	0.23	-0.4
113,483	+		MPMX19_05964	0.23	+0.1
113,483	+		MPMX19_05964	0.23	+0.2
113,483	+		MPMX19_05964	0.23	+1.9
113,483	+		MPMX19_05964	0.23	+0.1
113,483	+		MPMX19_05964	0.23	+0.9
113,483	+		MPMX19_05964	0.23	-0.2
113,483	+		MPMX19_05964	0.23	-1.6
113,483	+		MPMX19_05964	0.23	-1.0
113,483	+		MPMX19_05964	0.23	+0.1
113,484	-		MPMX19_05964	0.23	-1.1
113,484	-		MPMX19_05964	0.23	+1.1
113,484	-		MPMX19_05964	0.23	-1.2
113,484	-		MPMX19_05964	0.23	-1.6
113,484	-		MPMX19_05964	0.23	-1.1
113,484	-		MPMX19_05964	0.23	+0.9
113,484	-		MPMX19_05964	0.23	-1.6
113,484	-		MPMX19_05964	0.23	-0.9
113,484	-		MPMX19_05964	0.23	-1.5
113,484	-		MPMX19_05964	0.23	-1.6
113,484	-		MPMX19_05964	0.23	-1.0
113,528	+		MPMX19_05964	0.27	+1.4
113,528	+		MPMX19_05964	0.27	-0.5
113,528	+		MPMX19_05964	0.27	-1.7
113,529	-		MPMX19_05964	0.27	-0.3
113,603	+		MPMX19_05964	0.34	-0.6
113,604	-		MPMX19_05964	0.34	+0.2
113,711	+		MPMX19_05964	0.44	+0.4
113,895	+		MPMX19_05964	0.61	+1.5
113,895	+		MPMX19_05964	0.61	+0.9
113,895	+		MPMX19_05964	0.61	-0.6
113,895	+		MPMX19_05964	0.61	-2.1
113,896	-		MPMX19_05964	0.61	-1.6
113,896	-		MPMX19_05964	0.61	+0.5
113,896	-		MPMX19_05964	0.61	-1.0
113,896	-		MPMX19_05964	0.61	-2.2
113,896	-		MPMX19_05964	0.61	-0.9
113,897	+		MPMX19_05964	0.61	-0.1
113,897	+		MPMX19_05964	0.61	+0.8
113,897	+		MPMX19_05964	0.61	-1.1
113,897	+		MPMX19_05964	0.61	-1.8
113,898	-		MPMX19_05964	0.61	-0.5
113,898	-		MPMX19_05964	0.61	-0.1
113,993	+		MPMX19_05964	0.70	+0.5
113,993	+		MPMX19_05964	0.70	-1.0
113,993	+		MPMX19_05964	0.70	+0.3
113,994	-		MPMX19_05964	0.70	-1.8
113,994	-		MPMX19_05964	0.70	-0.9
113,994	-		MPMX19_05964	0.70	+0.2
113,994	-		MPMX19_05964	0.70	-1.5
114,062	+		MPMX19_05964	0.77	-0.7
114,062	+		MPMX19_05964	0.77	-0.0
114,062	+		MPMX19_05964	0.77	+0.7
114,062	+		MPMX19_05964	0.77	-1.5
114,062	+		MPMX19_05964	0.77	-0.1
114,062	+		MPMX19_05964	0.77	+0.3
114,062	+		MPMX19_05964	0.77	-0.2
114,062	+		MPMX19_05964	0.77	-0.9
114,062	+		MPMX19_05964	0.77	-1.2
114,062	+		MPMX19_05964	0.77	-0.0
114,062	+		MPMX19_05964	0.77	-0.7
114,062	+		MPMX19_05964	0.77	-1.7
114,063	-		MPMX19_05964	0.77	-1.5
114,063	-		MPMX19_05964	0.77	-0.7
114,063	-		MPMX19_05964	0.77	-0.7
114,063	-		MPMX19_05964	0.77	-0.1
114,063	-		MPMX19_05964	0.77	-0.6
114,063	-		MPMX19_05964	0.77	-2.5
114,063	-		MPMX19_05964	0.77	-1.8
114,063	-		MPMX19_05964	0.77	-0.5
114,063	-		MPMX19_05964	0.77	+0.3
114,063	-		MPMX19_05964	0.77	+0.6
114,063	-		MPMX19_05964	0.77	-0.0
114,063	-		MPMX19_05964	0.77	-1.1
114,063	-		MPMX19_05964	0.77	-0.7
114,063	-		MPMX19_05964	0.77	-0.1
114,063	-		MPMX19_05964	0.77	-1.1
114,063	-		MPMX19_05964	0.77	-0.7
114,306	+				+0.4
114,306	+				-1.4
114,306	+				+0.2
114,306	+				-0.5
114,306	+				+1.6
114,306	+				-1.3
114,306	+				+0.5
114,306	+				-0.3
114,306	+				-1.4
114,306	+				-1.1
114,306	+				-0.8
114,306	+				-0.4
114,306	+				-0.8
114,306	+				-1.1
114,306	+				-1.5
114,306	+				-1.1
114,306	+				-0.1
114,306	+				+0.6
114,306	+				-0.3
114,306	+				-0.6
114,306	+				+0.0
114,307	+				-0.8
114,307	-				+0.5
114,307	-				-1.8
114,307	-				+0.4
114,307	-				+0.3
114,307	-				-0.3
114,307	-				-0.5
114,307	-				+0.5
114,307	-				-1.8
114,307	-				+0.3
114,307	-				-0.5
114,307	-				+0.6
114,307	-				-0.0
114,307	-				-1.5
114,307	-				-1.9
114,307	-				-0.7
114,307	-				-0.9
114,307	-				-0.5
114,454	+				+0.6
114,454	+				+0.9
114,455	-				+0.9
114,706	+		MPMX19_05965	0.31	-1.6
114,706	+		MPMX19_05965	0.31	+0.5
114,706	+		MPMX19_05965	0.31	-0.4
114,707	-		MPMX19_05965	0.31	-0.5
114,707	-		MPMX19_05965	0.31	+0.8
114,769	+		MPMX19_05965	0.39	+1.3
114,769	+		MPMX19_05965	0.39	-0.4
114,769	+		MPMX19_05965	0.39	-0.3
114,769	+		MPMX19_05965	0.39	-0.9
114,770	-		MPMX19_05965	0.39	-1.5
114,770	-		MPMX19_05965	0.39	-0.6
115,057	+		MPMX19_05965	0.74	+0.6
115,057	+		MPMX19_05965	0.74	+0.0
115,057	+		MPMX19_05965	0.74	-1.2
115,057	+		MPMX19_05965	0.74	-0.1
115,057	+		MPMX19_05965	0.74	-0.5
115,058	-		MPMX19_05965	0.74	+0.1
115,058	-		MPMX19_05965	0.74	-0.6
115,058	-		MPMX19_05965	0.74	-0.5
115,058	-		MPMX19_05965	0.74	+0.3