Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05948

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
92,319	+		MPMX19_05947	0.16	+0.1
92,505	+		MPMX19_05947	0.37	+0.9
92,505	+		MPMX19_05947	0.37	-1.0
92,505	+		MPMX19_05947	0.37	-1.1
92,505	+		MPMX19_05947	0.37	-3.0
92,505	+		MPMX19_05947	0.37	+1.1
92,505	+		MPMX19_05947	0.37	+0.8
92,505	+		MPMX19_05947	0.37	-1.3
92,505	+		MPMX19_05947	0.37	+1.3
92,505	+		MPMX19_05947	0.37	+0.3
92,505	+		MPMX19_05947	0.37	-0.1
92,505	+		MPMX19_05947	0.37	+0.1
92,505	+		MPMX19_05947	0.37	-1.1
92,506	-		MPMX19_05947	0.37	-1.5
92,506	-		MPMX19_05947	0.37	+0.8
92,506	-		MPMX19_05947	0.37	-2.4
92,506	-		MPMX19_05947	0.37	-0.3
92,506	-		MPMX19_05947	0.37	+1.0
92,506	-		MPMX19_05947	0.37	-0.6
92,506	-		MPMX19_05947	0.37	-0.4
92,506	-		MPMX19_05947	0.37	+0.9
92,506	-		MPMX19_05947	0.37	+0.2
92,553	+		MPMX19_05947	0.42	-0.3
92,553	+		MPMX19_05947	0.42	+0.5
92,553	+		MPMX19_05947	0.42	-0.5
92,553	+		MPMX19_05947	0.42	-0.3
92,553	+		MPMX19_05947	0.42	-0.9
92,554	-		MPMX19_05947	0.42	-0.2
92,554	-		MPMX19_05947	0.42	-3.3
92,554	-		MPMX19_05947	0.42	-1.7
92,554	-		MPMX19_05947	0.42	-0.9
92,554	-		MPMX19_05947	0.42	-2.1
92,554	-		MPMX19_05947	0.42	-0.0
92,554	-		MPMX19_05947	0.42	+1.2
92,554	-		MPMX19_05947	0.42	+0.4
92,577	+		MPMX19_05947	0.44	+0.9
92,577	+		MPMX19_05947	0.44	-0.7
92,619	+		MPMX19_05947	0.49	-1.3
92,619	+		MPMX19_05947	0.49	-2.4
92,619	+		MPMX19_05947	0.49	+0.9
92,619	+		MPMX19_05947	0.49	-0.4
92,620	-		MPMX19_05947	0.49	-0.0
92,620	-		MPMX19_05947	0.49	+0.1
93,008	+				-0.8
93,009	-				+0.0
93,009	-				-0.7
93,009	-				-0.9
93,070	+				+1.1
93,091	+				-0.5
93,091	+				+1.1
93,108	+				+1.4
93,108	+				+0.2
93,108	+				-1.8
93,108	+				-1.4
93,108	+				-0.1
93,109	-				-1.1
93,109	-				+2.3
93,132	+				-1.6
93,132	+				-0.2
93,132	+				+0.1
93,132	+				-1.1
93,132	+				-2.1
93,132	+				-0.9
93,132	+				-1.1
93,132	+				+0.2
93,133	-				+0.1
93,133	-				+1.2
93,133	-				+0.5
93,133	-				-0.2
93,133	-				-1.3
93,141	+				-0.8
93,141	+				-0.8
93,581	-		MPMX19_05948	0.64	-0.1
93,581	-		MPMX19_05948	0.64	+1.3
93,581	-		MPMX19_05948	0.64	+1.3
93,694	+		MPMX19_05948	0.88	-0.9
93,694	+		MPMX19_05948	0.88	-0.8
93,694	+		MPMX19_05948	0.88	-0.1
93,694	+		MPMX19_05948	0.88	+1.4
93,694	+		MPMX19_05948	0.88	-1.5
93,694	+		MPMX19_05948	0.88	-1.8
93,694	+		MPMX19_05948	0.88	-1.1
93,694	+		MPMX19_05948	0.88	+0.5
93,694	+		MPMX19_05948	0.88	+0.4
93,694	+		MPMX19_05948	0.88	-0.8
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	+0.2
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	+0.2
93,694	+		MPMX19_05948	0.88	-0.3
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	-0.9
93,694	+		MPMX19_05948	0.88	-0.0
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	-0.7
93,694	+		MPMX19_05948	0.88	-0.8
93,694	+		MPMX19_05948	0.88	+0.4
93,694	+		MPMX19_05948	0.88	+0.3
93,694	+		MPMX19_05948	0.88	-0.2
93,694	+		MPMX19_05948	0.88	+1.1
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	+1.9
93,694	+		MPMX19_05948	0.88	+1.1
93,694	+		MPMX19_05948	0.88	-1.3
93,694	+		MPMX19_05948	0.88	+0.3
93,694	+		MPMX19_05948	0.88	+1.1
93,694	+		MPMX19_05948	0.88	+0.9
93,694	+		MPMX19_05948	0.88	-1.1
93,694	+		MPMX19_05948	0.88	-2.3
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	-1.5
93,695	-		MPMX19_05948	0.89	+0.5
93,695	-		MPMX19_05948	0.89	+0.4
93,695	-		MPMX19_05948	0.89	+0.7
93,695	-		MPMX19_05948	0.89	+0.0
93,695	-		MPMX19_05948	0.89	-0.3
93,695	-		MPMX19_05948	0.89	-2.1
93,695	-		MPMX19_05948	0.89	-0.8
93,695	-		MPMX19_05948	0.89	+0.1
93,695	-		MPMX19_05948	0.89	-1.6
93,695	-		MPMX19_05948	0.89	-0.1
93,695	-		MPMX19_05948	0.89	-0.2
93,695	-		MPMX19_05948	0.89	-0.9
93,695	-		MPMX19_05948	0.89	-1.2
93,695	-		MPMX19_05948	0.89	-0.3
93,695	-		MPMX19_05948	0.89	+0.1
93,695	-		MPMX19_05948	0.89	-0.1
93,695	-		MPMX19_05948	0.89	-1.3
93,695	-		MPMX19_05948	0.89	-0.3
93,695	-		MPMX19_05948	0.89	-0.8
93,695	-		MPMX19_05948	0.89	-0.1
93,695	-		MPMX19_05948	0.89	-0.9
93,695	-		MPMX19_05948	0.89	+0.8
93,695	-		MPMX19_05948	0.89	+1.1
93,695	-		MPMX19_05948	0.89	-0.5
93,695	-		MPMX19_05948	0.89	+0.4
93,695	-		MPMX19_05948	0.89	-2.0
93,695	-		MPMX19_05948	0.89	-0.9
93,695	-		MPMX19_05948	0.89	-1.1
93,695	-		MPMX19_05948	0.89	-0.5
93,695	-		MPMX19_05948	0.89	-0.7
93,695	-		MPMX19_05948	0.89	-1.5
93,695	-		MPMX19_05948	0.89	-0.5
93,695	-		MPMX19_05948	0.89	-2.7
93,695	-		MPMX19_05948	0.89	-0.5
94,126	+		MPMX19_05949	0.17	-0.3
94,126	+		MPMX19_05949	0.17	-1.0
94,126	+		MPMX19_05949	0.17	-0.8
94,127	-		MPMX19_05949	0.17	-1.7
94,127	-		MPMX19_05949	0.17	-1.6
94,127	-		MPMX19_05949	0.17	+0.4
94,127	-		MPMX19_05949	0.17	+1.4
94,127	-		MPMX19_05949	0.17	-0.5
94,201	-		MPMX19_05949	0.20	-1.2
94,201	-		MPMX19_05949	0.20	-1.1
94,201	-		MPMX19_05949	0.20	-0.6
94,201	-		MPMX19_05949	0.20	+0.3
94,201	-		MPMX19_05949	0.20	+1.5
94,399	+		MPMX19_05949	0.29	-1.8
94,399	+		MPMX19_05949	0.29	+0.1
94,399	+		MPMX19_05949	0.29	-0.1
94,399	+		MPMX19_05949	0.29	+0.1
94,399	+		MPMX19_05949	0.29	+0.3
94,399	+		MPMX19_05949	0.29	+1.6
94,399	+		MPMX19_05949	0.29	-0.1
94,399	+		MPMX19_05949	0.29	-2.6
94,399	+		MPMX19_05949	0.29	-1.0
94,399	+		MPMX19_05949	0.29	-1.6
94,399	+		MPMX19_05949	0.29	-0.0
94,399	+		MPMX19_05949	0.29	+0.3
94,399	+		MPMX19_05949	0.29	-1.0
94,399	+		MPMX19_05949	0.29	+1.6
94,399	+		MPMX19_05949	0.29	-2.0
94,399	+		MPMX19_05949	0.29	-0.8
94,399	+		MPMX19_05949	0.29	-0.9
94,399	+		MPMX19_05949	0.29	+0.8
94,399	+		MPMX19_05949	0.29	+0.2
94,399	+		MPMX19_05949	0.29	+0.2
94,399	+		MPMX19_05949	0.29	-0.3
94,399	+		MPMX19_05949	0.29	-0.1
94,399	+		MPMX19_05949	0.29	+0.1
94,399	+		MPMX19_05949	0.29	-0.9
94,399	+		MPMX19_05949	0.29	-0.1
94,400	-		MPMX19_05949	0.29	-2.7
94,400	-		MPMX19_05949	0.29	+1.0
94,400	-		MPMX19_05949	0.29	-0.9
94,400	-		MPMX19_05949	0.29	-0.1
94,400	-		MPMX19_05949	0.29	+0.3
94,400	-		MPMX19_05949	0.29	-0.1
94,400	-		MPMX19_05949	0.29	-0.7
94,400	-		MPMX19_05949	0.29	-1.0
94,400	-		MPMX19_05949	0.29	-1.6
94,400	-		MPMX19_05949	0.29	+0.4
94,400	-		MPMX19_05949	0.29	-0.5
94,400	-		MPMX19_05949	0.29	-0.4
94,400	-		MPMX19_05949	0.29	-0.5
94,400	-		MPMX19_05949	0.29	+0.2
94,400	-		MPMX19_05949	0.29	+0.7
94,400	-		MPMX19_05949	0.29	-0.0
94,400	-		MPMX19_05949	0.29	+0.1
94,400	-		MPMX19_05949	0.29	-0.5
94,400	-		MPMX19_05949	0.29	-1.7
94,400	-		MPMX19_05949	0.29	-0.1
94,400	-		MPMX19_05949	0.29	-0.7
94,400	-		MPMX19_05949	0.29	+0.9
94,400	-		MPMX19_05949	0.29	-0.5
94,400	-		MPMX19_05949	0.29	+0.6
94,400	-		MPMX19_05949	0.29	+0.3
94,400	-		MPMX19_05949	0.29	-1.3
94,400	-		MPMX19_05949	0.29	-0.0
94,400	-		MPMX19_05949	0.29	-1.0
94,542	+		MPMX19_05949	0.35	-2.3
94,542	+		MPMX19_05949	0.35	+0.7
94,543	-		MPMX19_05949	0.35	+1.2
94,727	-		MPMX19_05949	0.43	+0.9