Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05925

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
59,223	+		MPMX19_05924	0.29	-0.1
59,550	+		MPMX19_05924	0.59	-0.0
59,550	+		MPMX19_05924	0.59	+0.3
59,550	+		MPMX19_05924	0.59	-0.5
59,551	-		MPMX19_05924	0.59	-0.9
59,551	-		MPMX19_05924	0.59	+0.7
59,551	-		MPMX19_05924	0.59	+1.1
59,551	-		MPMX19_05924	0.59	+0.4
59,551	-		MPMX19_05924	0.59	+0.5
59,551	-		MPMX19_05924	0.59	+0.3
59,551	-		MPMX19_05924	0.59	-0.5
59,568	+		MPMX19_05924	0.61	-0.4
59,568	+		MPMX19_05924	0.61	-1.8
59,568	+		MPMX19_05924	0.61	-0.1
59,569	-		MPMX19_05924	0.61	+0.1
59,569	-		MPMX19_05924	0.61	-1.3
59,640	+		MPMX19_05924	0.67	+0.9
59,640	+		MPMX19_05924	0.67	-0.6
59,640	+		MPMX19_05924	0.67	+0.4
59,641	-		MPMX19_05924	0.67	+0.1
59,641	-		MPMX19_05924	0.67	-0.9
59,641	-		MPMX19_05924	0.67	-0.9
59,641	-		MPMX19_05924	0.67	-1.4
59,641	-		MPMX19_05924	0.67	-0.8
59,682	+		MPMX19_05924	0.71	-1.2
59,682	+		MPMX19_05924	0.71	-0.1
59,682	+		MPMX19_05924	0.71	-0.0
59,682	+		MPMX19_05924	0.71	-1.1
59,682	+		MPMX19_05924	0.71	+0.9
59,682	+		MPMX19_05924	0.71	-0.3
59,682	+		MPMX19_05924	0.71	+0.4
59,683	-		MPMX19_05924	0.71	-0.5
59,683	-		MPMX19_05924	0.71	+0.9
59,683	-		MPMX19_05924	0.71	+1.5
59,683	-		MPMX19_05924	0.71	-1.0
59,683	-		MPMX19_05924	0.71	-1.6
60,109	-				-1.1
60,132	+				+0.7
60,132	+				-0.7
60,133	-				-0.9
60,171	+				-1.1
60,171	+				+1.4
60,171	+				+0.5
60,171	+				+0.3
60,171	+				+0.6
60,171	+				-1.9
60,172	-				-1.1
60,172	-				-0.6
60,172	-				-0.9
60,172	-				-1.3
60,172	-				-0.2
60,246	+		MPMX19_05925	0.15	+0.5
60,246	+		MPMX19_05925	0.15	-0.2
60,246	+		MPMX19_05925	0.15	+0.5
60,246	+		MPMX19_05925	0.15	-0.4
60,246	+		MPMX19_05925	0.15	+1.1
60,246	+		MPMX19_05925	0.15	+0.1
60,246	+		MPMX19_05925	0.15	-1.6
60,246	+		MPMX19_05925	0.15	+0.6
60,246	+		MPMX19_05925	0.15	-0.7
60,246	+		MPMX19_05925	0.15	-1.7
60,246	+		MPMX19_05925	0.15	-1.7
60,246	+		MPMX19_05925	0.15	+0.1
60,246	+		MPMX19_05925	0.15	-0.7
60,246	+		MPMX19_05925	0.15	+0.5
60,246	+		MPMX19_05925	0.15	-0.8
60,246	+		MPMX19_05925	0.15	+0.7
60,246	+		MPMX19_05925	0.15	-0.4
60,246	+		MPMX19_05925	0.15	-1.1
60,247	-		MPMX19_05925	0.15	-0.3
60,247	-		MPMX19_05925	0.15	-0.1
60,247	-		MPMX19_05925	0.15	+0.7
60,247	-		MPMX19_05925	0.15	-1.8
60,247	-		MPMX19_05925	0.15	-0.5
60,247	-		MPMX19_05925	0.15	-0.8
60,247	-		MPMX19_05925	0.15	-1.7
60,247	-		MPMX19_05925	0.15	+0.0
60,247	-		MPMX19_05925	0.15	-0.5
60,247	-		MPMX19_05925	0.15	-0.1
60,247	-		MPMX19_05925	0.15	-0.0
60,247	-		MPMX19_05925	0.15	+0.2
60,247	-		MPMX19_05925	0.15	+0.7
60,247	-		MPMX19_05925	0.15	-0.5
60,247	-		MPMX19_05925	0.15	-0.6
60,247	-		MPMX19_05925	0.15	+1.5
60,247	-		MPMX19_05925	0.15	-1.2
60,247	-		MPMX19_05925	0.15	+0.9
60,247	-		MPMX19_05925	0.15	-0.1
60,247	-		MPMX19_05925	0.15	-0.7
60,247	-		MPMX19_05925	0.15	-1.8
60,261	+		MPMX19_05925	0.16	+1.1
60,261	+		MPMX19_05925	0.16	-0.6
60,261	+		MPMX19_05925	0.16	-1.1
60,261	+		MPMX19_05925	0.16	-0.0
60,261	+		MPMX19_05925	0.16	-1.3
60,261	+		MPMX19_05925	0.16	-0.5
60,262	-		MPMX19_05925	0.16	+0.0
60,262	-		MPMX19_05925	0.16	+1.3
60,262	-		MPMX19_05925	0.16	+0.2
60,262	-		MPMX19_05925	0.16	+0.9
60,262	-		MPMX19_05925	0.16	+0.1
60,285	+		MPMX19_05925	0.17	+0.9
60,285	+		MPMX19_05925	0.17	-0.7
60,285	+		MPMX19_05925	0.17	-0.9
60,286	-		MPMX19_05925	0.18	-0.1
60,342	+		MPMX19_05925	0.21	-1.6
60,343	-		MPMX19_05925	0.22	+0.2
60,343	-		MPMX19_05925	0.22	+0.7
60,343	-		MPMX19_05925	0.22	-0.3
60,360	+		MPMX19_05925	0.23	+0.2
60,360	+		MPMX19_05925	0.23	+1.4
60,361	-		MPMX19_05925	0.23	-0.7
60,361	-		MPMX19_05925	0.23	-0.6
60,361	-		MPMX19_05925	0.23	-0.1
60,361	-		MPMX19_05925	0.23	+0.1
60,369	+		MPMX19_05925	0.23	+1.2
60,370	-		MPMX19_05925	0.23	-1.3
60,370	-		MPMX19_05925	0.23	-0.1
60,370	-		MPMX19_05925	0.23	-0.2
60,381	+		MPMX19_05925	0.24	-0.7
60,381	+		MPMX19_05925	0.24	-1.9
60,381	+		MPMX19_05925	0.24	+1.2
60,382	-		MPMX19_05925	0.24	-0.1
60,486	+		MPMX19_05925	0.32	-0.1
60,486	+		MPMX19_05925	0.32	-0.2
60,486	+		MPMX19_05925	0.32	-0.4
60,486	+		MPMX19_05925	0.32	-0.2
60,487	-		MPMX19_05925	0.32	-0.3
60,487	-		MPMX19_05925	0.32	-0.1
60,487	-		MPMX19_05925	0.32	-0.3
60,487	-		MPMX19_05925	0.32	+1.9
60,487	-		MPMX19_05925	0.32	-2.0
60,487	-		MPMX19_05925	0.32	-0.2
60,487	-		MPMX19_05925	0.32	-0.6
60,732	+		MPMX19_05925	0.49	-0.2
60,733	-		MPMX19_05925	0.49	-0.1
60,738	+		MPMX19_05925	0.49	-0.9
60,738	+		MPMX19_05925	0.49	-0.8
60,738	+		MPMX19_05925	0.49	+0.6
60,738	+		MPMX19_05925	0.49	-0.0
60,738	+		MPMX19_05925	0.49	+0.4
60,738	+		MPMX19_05925	0.49	+0.3
60,738	+		MPMX19_05925	0.49	-0.2
60,738	+		MPMX19_05925	0.49	+0.1
60,738	+		MPMX19_05925	0.49	+0.4
60,739	-		MPMX19_05925	0.50	-0.6
60,739	-		MPMX19_05925	0.50	+1.3
60,739	-		MPMX19_05925	0.50	-0.7
60,739	-		MPMX19_05925	0.50	+1.1
60,739	-		MPMX19_05925	0.50	+1.6
60,739	-		MPMX19_05925	0.50	-1.7
60,739	-		MPMX19_05925	0.50	-2.2
60,739	-		MPMX19_05925	0.50	-0.1
60,739	-		MPMX19_05925	0.50	+0.1
60,837	+		MPMX19_05925	0.56	+1.6
60,837	+		MPMX19_05925	0.56	+1.9
60,837	+		MPMX19_05925	0.56	-0.6
60,837	+		MPMX19_05925	0.56	-2.0
60,837	+		MPMX19_05925	0.56	-0.2
60,838	-		MPMX19_05925	0.56	-0.4
60,838	-		MPMX19_05925	0.56	+1.0
60,873	+		MPMX19_05925	0.59	+0.5
60,874	-		MPMX19_05925	0.59	+0.9
60,874	-		MPMX19_05925	0.59	-0.5
60,874	-		MPMX19_05925	0.59	-1.9
60,885	+		MPMX19_05925	0.60	-0.6
60,885	+		MPMX19_05925	0.60	-0.3
60,885	+		MPMX19_05925	0.60	-0.5
60,885	+		MPMX19_05925	0.60	-0.3
60,885	+		MPMX19_05925	0.60	-1.3
60,885	+		MPMX19_05925	0.60	-0.7
60,885	+		MPMX19_05925	0.60	+1.5
60,885	+		MPMX19_05925	0.60	-1.5
60,885	+		MPMX19_05925	0.60	+0.7
60,886	-		MPMX19_05925	0.60	+0.5
60,886	-		MPMX19_05925	0.60	+0.9
60,886	-		MPMX19_05925	0.60	-0.5
60,886	-		MPMX19_05925	0.60	+0.5
60,886	-		MPMX19_05925	0.60	+0.8
60,886	-		MPMX19_05925	0.60	+0.5
60,886	-		MPMX19_05925	0.60	+1.5
60,886	-		MPMX19_05925	0.60	-0.8
60,945	+		MPMX19_05925	0.64	-2.6
60,945	+		MPMX19_05925	0.64	-0.8
60,945	+		MPMX19_05925	0.64	-0.2
60,945	+		MPMX19_05925	0.64	+0.9
60,945	+		MPMX19_05925	0.64	+0.7
60,945	+		MPMX19_05925	0.64	+0.5
60,945	+		MPMX19_05925	0.64	+0.4
60,945	+		MPMX19_05925	0.64	-1.9
60,945	+		MPMX19_05925	0.64	+0.3
60,946	-		MPMX19_05925	0.64	-0.9
60,946	-		MPMX19_05925	0.64	+0.9
60,946	-		MPMX19_05925	0.64	-1.3
60,946	-		MPMX19_05925	0.64	+1.1
60,946	-		MPMX19_05925	0.64	-0.8
60,946	-		MPMX19_05925	0.64	+0.3
61,559	+				+0.1
61,559	+				+0.0
61,559	+				-0.7
61,559	+				+0.2
61,559	+				-0.3
61,560	-				-0.1
61,560	-				+1.1
61,560	-				-0.7
61,560	-				+0.3
61,560	-				+1.3
61,560	-				+0.5
61,560	-				-0.5
61,560	-				-0.5
61,560	-				-0.0
61,611	+				-0.1
61,611	+				+0.1
61,611	+				-1.4
61,612	-				-0.1
61,623	+				+1.0
61,623	+				+0.5
61,623	+				-0.1
61,624	-				-1.1
61,624	-				+0.2
61,785	+				-0.1
61,785	+				-0.9
61,785	+				-0.8
61,785	+				-0.1
61,786	-				-0.1
61,786	-				-2.8
61,786	-				-0.7
61,786	-				-1.0
61,802	+				-0.9
61,802	+				-1.5
61,803	-				-1.9
61,825	+				-1.4
61,825	+				-1.1
61,825	+				-0.9
61,825	+				-0.6
61,826	-				+0.6
61,826	-				+0.1
61,826	-				-0.7
61,826	-				-0.9
61,826	-				-0.0
61,826	-				-1.8
61,883	+				+0.1
61,883	+				-0.1
61,887	+				-0.5
61,887	+				+0.7
61,887	+				-0.7
61,887	+				+0.9
61,888	-				-0.9
61,888	-				-0.8
61,904	+				-0.5
61,912	+				-0.7
61,912	+				+0.8
61,912	+				-0.7
61,912	+				-0.0
61,912	+				-0.7
61,912	+				+1.5
61,912	+				+0.1
61,913	-				+0.4
61,913	-				-0.1
61,913	-				-0.5
61,913	-				-1.6
61,913	-				+0.7
61,913	-				-0.5
61,917	-				-0.8
61,917	-				+0.2
62,242	+				-0.8
62,242	+				+0.6
62,242	+				-2.3
62,243	-				-0.4
62,243	-				-0.5
62,243	-				+0.5
62,243	-				-0.9