Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05803

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
525,034	+		MPMX19_05801	0.65	-0.2
525,034	+		MPMX19_05801	0.65	-1.0
525,034	+		MPMX19_05801	0.65	+1.0
525,034	+		MPMX19_05801	0.65	-1.9
525,034	+		MPMX19_05801	0.65	-1.4
525,034	+		MPMX19_05801	0.65	+0.4
525,035	-		MPMX19_05801	0.65	+1.1
525,035	-		MPMX19_05801	0.65	-0.9
525,035	-		MPMX19_05801	0.65	+0.5
525,035	-		MPMX19_05801	0.65	-1.5
525,035	-		MPMX19_05801	0.65	-0.0
525,035	-		MPMX19_05801	0.65	-0.4
525,035	-		MPMX19_05801	0.65	+0.2
525,035	-		MPMX19_05801	0.65	-0.7
525,035	-		MPMX19_05801	0.65	-1.1
525,043	+		MPMX19_05801	0.66	-0.4
525,043	+		MPMX19_05801	0.66	-1.2
525,044	-		MPMX19_05801	0.66	-1.2
525,044	-		MPMX19_05801	0.66	-1.1
525,076	+		MPMX19_05801	0.69	+1.4
525,076	+		MPMX19_05801	0.69	-0.6
525,076	+		MPMX19_05801	0.69	-0.1
525,076	+		MPMX19_05801	0.69	-0.2
525,076	+		MPMX19_05801	0.69	-1.6
525,076	+		MPMX19_05801	0.69	-0.9
525,076	+		MPMX19_05801	0.69	-0.2
525,076	+		MPMX19_05801	0.69	+0.6
525,076	+		MPMX19_05801	0.69	-0.5
525,077	-		MPMX19_05801	0.69	+0.4
525,077	-		MPMX19_05801	0.69	-0.1
525,077	-		MPMX19_05801	0.69	+0.8
525,077	-		MPMX19_05801	0.69	-2.4
525,077	-		MPMX19_05801	0.69	-0.5
525,199	+		MPMX19_05801	0.81	-1.2
525,199	+		MPMX19_05801	0.81	-0.4
525,199	+		MPMX19_05801	0.81	+1.2
525,199	+		MPMX19_05801	0.81	-0.9
525,199	+		MPMX19_05801	0.81	+0.6
525,199	+		MPMX19_05801	0.81	-1.2
525,199	+		MPMX19_05801	0.81	-1.6
525,199	+		MPMX19_05801	0.81	+0.5
525,199	+		MPMX19_05801	0.81	-0.2
525,199	+		MPMX19_05801	0.81	-1.2
525,199	+		MPMX19_05801	0.81	-1.0
525,199	+		MPMX19_05801	0.81	-2.0
525,200	-		MPMX19_05801	0.82	+0.6
525,200	-		MPMX19_05801	0.82	+0.2
525,200	-		MPMX19_05801	0.82	-0.9
525,200	-		MPMX19_05801	0.82	+0.4
525,319	+				+0.0
525,319	+				-1.5
525,319	+				+0.1
525,319	+				-0.3
525,319	+				-0.8
525,320	-				-0.5
525,320	-				+0.1
525,320	-				-1.5
525,320	-				-0.9
525,320	-				+0.6
525,320	-				-0.7
525,320	-				-0.8
525,320	-				+0.8
525,382	+				+0.0
525,382	+				-0.5
525,382	+				+0.3
525,382	+				-0.8
525,382	+				-0.9
525,382	+				-0.7
525,382	+				+0.2
525,382	+				-0.5
525,382	+				+0.6
525,382	+				-0.4
525,382	+				-0.4
525,382	+				-0.8
525,382	+				+0.1
525,382	+				-1.3
525,382	+				+0.3
525,382	+				+0.0
525,383	-				-0.8
525,383	-				-1.8
525,383	-				+1.5
525,383	-				-1.8
525,383	-				-2.2
525,383	-				+0.4
525,383	-				+0.8
525,383	-				-0.2
525,396	+				-1.2
525,397	-				-1.1
525,576	+		MPMX19_05802	0.17	-0.3
525,576	+		MPMX19_05802	0.17	+1.5
525,576	+		MPMX19_05802	0.17	-1.8
525,576	+		MPMX19_05802	0.17	-1.2
525,576	+		MPMX19_05802	0.17	+0.2
525,576	+		MPMX19_05802	0.17	+1.1
525,576	+		MPMX19_05802	0.17	-0.7
525,576	+		MPMX19_05802	0.17	-0.3
525,576	+		MPMX19_05802	0.17	-0.8
525,576	+		MPMX19_05802	0.17	+0.7
525,576	+		MPMX19_05802	0.17	-1.4
525,576	+		MPMX19_05802	0.17	-0.8
525,576	+		MPMX19_05802	0.17	-3.0
525,576	+		MPMX19_05802	0.17	-3.0
525,576	+		MPMX19_05802	0.17	-0.7
525,576	+		MPMX19_05802	0.17	-0.2
525,576	+		MPMX19_05802	0.17	+0.0
525,576	+		MPMX19_05802	0.17	-0.5
525,576	+		MPMX19_05802	0.17	+0.2
525,576	+		MPMX19_05802	0.17	-0.5
525,576	+		MPMX19_05802	0.17	+0.0
525,576	+		MPMX19_05802	0.17	-0.4
525,576	+		MPMX19_05802	0.17	-2.1
525,576	+		MPMX19_05802	0.17	-1.4
525,576	+		MPMX19_05802	0.17	+0.8
525,576	+		MPMX19_05802	0.17	-0.5
525,576	+		MPMX19_05802	0.17	+0.4
525,576	+		MPMX19_05802	0.17	-0.2
525,576	+		MPMX19_05802	0.17	+0.2
525,576	+		MPMX19_05802	0.17	-0.9
525,576	+		MPMX19_05802	0.17	+1.5
525,576	+		MPMX19_05802	0.17	-0.3
525,576	+		MPMX19_05802	0.17	-1.5
525,576	+		MPMX19_05802	0.17	+0.0
525,576	+		MPMX19_05802	0.17	-1.0
525,577	-		MPMX19_05802	0.17	-1.9
525,577	-		MPMX19_05802	0.17	-0.8
525,577	-		MPMX19_05802	0.17	-1.8
525,577	-		MPMX19_05802	0.17	+0.7
525,577	-		MPMX19_05802	0.17	-0.3
525,577	-		MPMX19_05802	0.17	+0.8
525,577	-		MPMX19_05802	0.17	-0.1
525,577	-		MPMX19_05802	0.17	-1.8
525,577	-		MPMX19_05802	0.17	-1.8
525,577	-		MPMX19_05802	0.17	-0.5
525,577	-		MPMX19_05802	0.17	+0.3
525,577	-		MPMX19_05802	0.17	-1.4
525,577	-		MPMX19_05802	0.17	-0.0
525,577	-		MPMX19_05802	0.17	-1.5
525,577	-		MPMX19_05802	0.17	-1.4
525,577	-		MPMX19_05802	0.17	+0.8
525,577	-		MPMX19_05802	0.17	-1.6
525,577	-		MPMX19_05802	0.17	-1.0
525,577	-		MPMX19_05802	0.17	-0.7
525,577	-		MPMX19_05802	0.17	-1.5
525,577	-		MPMX19_05802	0.17	+0.4
525,577	-		MPMX19_05802	0.17	+0.4
525,577	-		MPMX19_05802	0.17	-1.6
525,577	-		MPMX19_05802	0.17	-1.1
525,577	-		MPMX19_05802	0.17	-0.4
525,577	-		MPMX19_05802	0.17	-0.2
525,577	-		MPMX19_05802	0.17	-0.5
525,577	-		MPMX19_05802	0.17	-0.6
525,577	-		MPMX19_05802	0.17	+1.0
525,577	-		MPMX19_05802	0.17	+0.5
525,577	-		MPMX19_05802	0.17	+0.9
525,577	-		MPMX19_05802	0.17	-1.2
525,577	-		MPMX19_05802	0.17	+0.4
525,577	-		MPMX19_05802	0.17	-0.5
525,577	-		MPMX19_05802	0.17	+0.6
525,577	-		MPMX19_05802	0.17	-1.1
525,577	-		MPMX19_05802	0.17	-0.1
525,577	-		MPMX19_05802	0.17	-1.2
525,577	-		MPMX19_05802	0.17	-0.6
525,577	-		MPMX19_05802	0.17	+0.6
525,577	-		MPMX19_05802	0.17	+1.1
525,577	-		MPMX19_05802	0.17	+0.7
525,577	-		MPMX19_05802	0.17	-2.9
525,577	-		MPMX19_05802	0.17	+0.4
525,577	-		MPMX19_05802	0.17	-0.7
525,577	-		MPMX19_05802	0.17	+0.8
525,577	-		MPMX19_05802	0.17	-0.6
525,621	-		MPMX19_05802	0.26	+0.3
525,622	-		MPMX19_05802	0.26	-0.8
525,622	-		MPMX19_05802	0.26	-0.6
525,622	-		MPMX19_05802	0.26	+0.4
525,639	+		MPMX19_05802	0.29	+2.0
525,639	+		MPMX19_05802	0.29	+0.0
525,639	+		MPMX19_05802	0.29	-1.1
525,640	-		MPMX19_05802	0.29	-0.0
525,640	-		MPMX19_05802	0.29	-0.9
525,640	-		MPMX19_05802	0.29	-1.8
525,640	-		MPMX19_05802	0.29	+0.2
525,640	-		MPMX19_05802	0.29	-1.5
525,640	-		MPMX19_05802	0.29	-0.9
525,696	+		MPMX19_05802	0.39	+1.0
525,696	+		MPMX19_05802	0.39	+1.1
525,696	+		MPMX19_05802	0.39	-0.4
525,696	+		MPMX19_05802	0.39	-1.4
525,696	+		MPMX19_05802	0.39	+1.1
525,697	-		MPMX19_05802	0.40	+0.1
525,697	-		MPMX19_05802	0.40	-1.5
525,697	-		MPMX19_05802	0.40	-2.1
525,697	-		MPMX19_05802	0.40	-0.6
525,697	-		MPMX19_05802	0.40	-0.2
525,697	-		MPMX19_05802	0.40	-1.6
525,697	-		MPMX19_05802	0.40	+0.0
525,697	-		MPMX19_05802	0.40	+0.4
525,697	-		MPMX19_05802	0.40	+0.2
525,697	-		MPMX19_05802	0.40	+0.0
525,697	-		MPMX19_05802	0.40	-0.8
525,697	-		MPMX19_05802	0.40	-0.4
525,697	-		MPMX19_05802	0.40	-0.2
525,697	-		MPMX19_05802	0.40	-1.0
525,810	+		MPMX19_05802	0.61	-1.0
525,810	+		MPMX19_05802	0.61	-0.6
525,810	+		MPMX19_05802	0.61	+0.8
525,811	-		MPMX19_05802	0.61	+0.7
525,811	-		MPMX19_05802	0.61	+1.1
525,811	-		MPMX19_05802	0.61	+0.8
525,811	-		MPMX19_05802	0.61	-0.2
525,811	-		MPMX19_05802	0.61	-0.8
525,811	-		MPMX19_05802	0.61	-0.1
525,811	-		MPMX19_05802	0.61	-1.5
525,811	-		MPMX19_05802	0.61	-0.5
525,811	-		MPMX19_05802	0.61	-2.2
525,846	+		MPMX19_05802	0.67	-0.6
525,846	+		MPMX19_05802	0.67	-0.4
525,846	+		MPMX19_05802	0.67	-0.8
525,846	+		MPMX19_05802	0.67	-0.9
525,846	+		MPMX19_05802	0.67	-1.1
525,846	+		MPMX19_05802	0.67	-2.8
525,846	+		MPMX19_05802	0.67	-1.4
525,847	-		MPMX19_05802	0.67	-0.6
525,847	-		MPMX19_05802	0.67	+0.0
525,847	-		MPMX19_05802	0.67	+1.0
525,847	-		MPMX19_05802	0.67	-0.1
525,847	-		MPMX19_05802	0.67	-0.2
525,847	-		MPMX19_05802	0.67	+2.3
525,847	-		MPMX19_05802	0.67	-0.4
525,847	-		MPMX19_05802	0.67	-1.0
525,847	-		MPMX19_05802	0.67	-1.0
525,882	+		MPMX19_05802	0.74	-0.3
525,882	+		MPMX19_05802	0.74	-0.3
525,882	+		MPMX19_05802	0.74	+0.1
525,882	+		MPMX19_05802	0.74	+1.4
525,882	+		MPMX19_05802	0.74	+0.2
525,882	+		MPMX19_05802	0.74	-0.8
525,882	+		MPMX19_05802	0.74	-0.1
525,882	+		MPMX19_05802	0.74	+0.2
525,882	+		MPMX19_05802	0.74	+0.5
525,882	+		MPMX19_05802	0.74	+0.5
525,883	-		MPMX19_05802	0.74	+0.2
525,883	-		MPMX19_05802	0.74	+1.8
525,883	-		MPMX19_05802	0.74	-1.4
525,883	-		MPMX19_05802	0.74	+0.5
525,883	-		MPMX19_05802	0.74	+0.2
525,883	-		MPMX19_05802	0.74	-0.9
525,883	-		MPMX19_05802	0.74	+0.2
525,883	-		MPMX19_05802	0.74	-1.1
525,883	-		MPMX19_05802	0.74	-0.8
525,883	-		MPMX19_05802	0.74	+0.2
525,883	-		MPMX19_05802	0.74	-1.1
525,883	-		MPMX19_05802	0.74	-1.9
525,883	-		MPMX19_05802	0.74	-0.4
525,883	-		MPMX19_05802	0.74	-0.4
525,883	-		MPMX19_05802	0.74	+1.4
525,883	-		MPMX19_05802	0.74	-0.9
525,883	-		MPMX19_05802	0.74	-1.1
525,921	+		MPMX19_05802	0.81	+0.6
525,921	+		MPMX19_05802	0.81	-2.4
525,921	+		MPMX19_05802	0.81	-2.2
525,921	+		MPMX19_05802	0.81	+0.2
525,922	-		MPMX19_05802	0.81	-0.1
525,922	-		MPMX19_05802	0.81	-0.1
525,974	+				-1.5
525,974	+				-0.9
525,974	+				-0.2
525,974	+				-0.2
525,974	+				+0.1
525,974	+				+0.7
525,974	+				+0.1
525,974	+				+0.6
525,975	-				+1.1
525,975	-				-0.8
525,975	-				+0.2
525,975	-				+1.6
525,975	-				+0.2
525,975	-				-0.9
525,975	-				-0.5
526,112	+				-0.1
526,112	+				+0.4
526,112	+				-0.9
526,113	-				-0.1
526,113	-				-0.4
526,113	-				+1.1
526,113	-				+0.5
526,400	+		MPMX19_05803	0.30	-1.2
526,400	+		MPMX19_05803	0.30	-0.6
526,400	+		MPMX19_05803	0.30	+0.1
526,401	-		MPMX19_05803	0.30	-0.2
526,401	-		MPMX19_05803	0.30	-0.4
526,401	-		MPMX19_05803	0.30	-0.6
526,401	-		MPMX19_05803	0.30	-0.9
526,401	-		MPMX19_05803	0.30	+1.8
526,484	+		MPMX19_05803	0.37	-0.5
526,484	+		MPMX19_05803	0.37	+1.5
526,484	+		MPMX19_05803	0.37	-2.4
526,484	+		MPMX19_05803	0.37	+0.3
526,484	+		MPMX19_05803	0.37	-1.9
526,484	+		MPMX19_05803	0.37	-0.0
526,484	+		MPMX19_05803	0.37	+1.0
526,484	+		MPMX19_05803	0.37	-1.0
526,484	+		MPMX19_05803	0.37	-1.1
526,484	+		MPMX19_05803	0.37	-1.0
526,484	+		MPMX19_05803	0.37	-2.1
526,484	+		MPMX19_05803	0.37	+2.8
526,484	+		MPMX19_05803	0.37	-1.9
526,484	+		MPMX19_05803	0.37	+0.6
526,484	+		MPMX19_05803	0.37	-0.4
526,484	+		MPMX19_05803	0.37	-2.2
526,485	-		MPMX19_05803	0.37	+1.6
526,485	-		MPMX19_05803	0.37	+1.6
526,485	-		MPMX19_05803	0.37	-1.2
526,485	-		MPMX19_05803	0.37	-1.8
526,485	-		MPMX19_05803	0.37	-1.2
526,485	-		MPMX19_05803	0.37	-0.2
526,485	-		MPMX19_05803	0.37	+1.8
526,485	-		MPMX19_05803	0.37	-0.5
526,485	-		MPMX19_05803	0.37	+0.3
526,485	-		MPMX19_05803	0.37	-0.6
526,485	-		MPMX19_05803	0.37	+0.5
526,485	-		MPMX19_05803	0.37	-1.6
526,485	-		MPMX19_05803	0.37	+1.1
526,583	+		MPMX19_05803	0.44	+0.6
526,583	+		MPMX19_05803	0.44	+0.8
526,583	+		MPMX19_05803	0.44	-0.5
526,584	-		MPMX19_05803	0.44	+1.5
526,584	-		MPMX19_05803	0.44	+1.3
526,584	-		MPMX19_05803	0.44	-0.5
526,586	+		MPMX19_05803	0.45	-1.4
526,586	+		MPMX19_05803	0.45	+0.0
526,586	+		MPMX19_05803	0.45	-0.8
526,586	+		MPMX19_05803	0.45	+0.3
526,586	+		MPMX19_05803	0.45	-1.4
526,586	+		MPMX19_05803	0.45	+0.1
526,586	+		MPMX19_05803	0.45	+0.2
526,586	+		MPMX19_05803	0.45	-1.2
526,586	+		MPMX19_05803	0.45	-0.8
526,586	+		MPMX19_05803	0.45	-0.9
526,586	+		MPMX19_05803	0.45	+0.7
526,586	+		MPMX19_05803	0.45	+0.1
526,586	+		MPMX19_05803	0.45	-0.5
526,587	-		MPMX19_05803	0.45	-0.5
526,587	-		MPMX19_05803	0.45	-0.3
526,587	-		MPMX19_05803	0.45	+0.7
526,587	-		MPMX19_05803	0.45	-0.4
526,587	-		MPMX19_05803	0.45	+0.7
526,587	-		MPMX19_05803	0.45	-1.4
526,587	-		MPMX19_05803	0.45	+0.2
526,587	-		MPMX19_05803	0.45	+0.2
526,587	-		MPMX19_05803	0.45	-0.6
526,587	-		MPMX19_05803	0.45	-1.4
526,754	+		MPMX19_05803	0.58	+0.5
526,754	+		MPMX19_05803	0.58	+1.1
526,754	+		MPMX19_05803	0.58	-0.5
526,754	+		MPMX19_05803	0.58	+0.1
526,754	+		MPMX19_05803	0.58	-0.1
526,755	-		MPMX19_05803	0.58	+1.8
526,755	-		MPMX19_05803	0.58	-0.0
526,755	-		MPMX19_05803	0.58	-0.4
526,755	-		MPMX19_05803	0.58	+1.3
526,755	-		MPMX19_05803	0.58	-1.5
526,781	+		MPMX19_05803	0.60	+0.5
526,782	-		MPMX19_05803	0.60	+1.4
526,883	+		MPMX19_05803	0.68	-0.3
526,883	+		MPMX19_05803	0.68	+0.7
526,883	+		MPMX19_05803	0.68	+0.2
526,884	-		MPMX19_05803	0.68	+1.0
526,884	-		MPMX19_05803	0.68	-0.5
526,898	+		MPMX19_05803	0.69	-0.5
526,898	+		MPMX19_05803	0.69	+0.0
526,898	+		MPMX19_05803	0.69	-0.6
526,898	+		MPMX19_05803	0.69	-0.1
526,898	+		MPMX19_05803	0.69	-2.7
526,898	+		MPMX19_05803	0.69	-0.5
526,898	+		MPMX19_05803	0.69	+0.1
526,898	+		MPMX19_05803	0.69	+0.8
526,898	+		MPMX19_05803	0.69	-0.2
526,898	+		MPMX19_05803	0.69	-1.3
526,898	+		MPMX19_05803	0.69	-0.1
526,898	+		MPMX19_05803	0.69	+0.3
526,899	-		MPMX19_05803	0.69	-0.8
526,899	-		MPMX19_05803	0.69	-1.1
526,899	-		MPMX19_05803	0.69	-0.5
526,899	-		MPMX19_05803	0.69	-1.8
526,899	-		MPMX19_05803	0.69	+0.2
526,899	-		MPMX19_05803	0.69	-0.6
526,899	-		MPMX19_05803	0.69	-0.4
526,899	-		MPMX19_05803	0.69	-1.0
526,899	-		MPMX19_05803	0.69	-0.8
526,899	-		MPMX19_05803	0.69	+0.4
526,899	-		MPMX19_05803	0.69	-0.1
527,063	+		MPMX19_05803	0.82	-0.1
527,063	+		MPMX19_05803	0.82	-0.6
527,063	+		MPMX19_05803	0.82	-2.1
527,063	+		MPMX19_05803	0.82	-0.4
527,063	+		MPMX19_05803	0.82	-0.1
527,064	-		MPMX19_05803	0.82	-0.1
527,064	-		MPMX19_05803	0.82	-1.9
527,064	-		MPMX19_05803	0.82	+1.1
527,213	+				+0.2
527,213	+				+0.2
527,213	+				-0.4
527,214	-				-0.2
527,214	-				+1.8
527,214	-				+0.2
527,214	-				-1.7
527,214	-				+0.8
527,214	-				+0.0
527,214	-				-0.1
527,249	+				-1.0
527,249	+				+0.5
527,249	+				-0.6
527,249	+				-0.7
527,249	+				-0.1
527,249	+				+0.3
527,249	+				-0.2
527,249	+				-1.8
527,249	+				-1.3
527,249	+				-1.0
527,249	+				+0.4
527,249	+				-0.1
527,249	+				-0.3
527,249	+				-1.3
527,249	+				+1.1
527,249	+				-1.6
527,249	+				+0.7
527,249	+				-1.1
527,249	+				+1.0
527,249	+				-1.3
527,249	+				-0.6
527,249	+				+0.1
527,249	+				+0.0
527,249	+				-2.4
527,250	-				-0.4
527,250	-				-0.2
527,250	-				+1.2
527,250	-				-0.1
527,250	-				-0.8
527,250	-				+0.0
527,250	-				-1.0
527,250	-				-0.8
527,250	-				-1.4
527,250	-				-2.1
527,250	-				+1.8
527,250	-				-1.1
527,250	-				-0.2
527,250	-				-1.3
527,250	-				-1.3
527,250	-				-0.8
527,250	-				-0.3
527,250	-				-0.4
527,250	-				-0.6
527,250	-				-0.6
527,250	-				+0.1
527,250	-				-1.2
527,250	-				+0.0
527,250	-				+0.0
527,250	-				-0.2
527,250	-				-1.0
527,250	-				-1.7
527,250	-				-0.2
527,436	+				-1.6
527,437	-				+0.4
527,437	-				+2.2
527,437	-				+0.7
527,440	+				-1.4
527,440	+				+0.0
527,441	-				-1.2
527,543	+				-1.1
527,602	+				-0.6
527,633	+				-1.7
527,633	+				-0.4
527,633	+				-2.1
527,633	+				+0.3
527,634	-				-1.2
527,634	-				-1.2
528,169	+		MPMX19_05804	0.19	-0.5
528,169	+		MPMX19_05804	0.19	+0.6
528,169	+		MPMX19_05804	0.19	-1.0
528,170	-		MPMX19_05804	0.19	-0.1