Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05391

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
68,786	+		MPMX19_05390	0.67	+0.3
68,787	-		MPMX19_05390	0.67	-2.2
68,787	-		MPMX19_05390	0.67	+0.4
68,792	+		MPMX19_05390	0.67	-1.1
68,816	+		MPMX19_05390	0.68	+0.7
68,817	-		MPMX19_05390	0.68	+0.4
68,844	+		MPMX19_05390	0.69	-1.0
68,844	+		MPMX19_05390	0.69	-0.4
68,845	-		MPMX19_05390	0.69	+0.7
68,845	-		MPMX19_05390	0.69	+0.2
68,993	-		MPMX19_05390	0.74	-0.7
69,153	-		MPMX19_05390	0.79	-1.7
69,153	-		MPMX19_05390	0.79	-0.9
69,217	-		MPMX19_05390	0.81	-1.2
69,363	+		MPMX19_05390	0.86	-0.5
69,363	+		MPMX19_05390	0.86	-1.5
69,364	-		MPMX19_05390	0.86	+0.3
69,364	-		MPMX19_05390	0.86	-1.6
69,432	-		MPMX19_05390	0.89	-1.2
69,451	-		MPMX19_05390	0.89	-1.7
69,557	+				-1.2
69,558	-				-0.3
69,564	-				-0.5
69,564	-				-1.6
69,564	-				+0.8
69,569	-				+0.1
69,569	-				-0.2
69,569	-				-0.8
69,569	-				-0.3
69,572	+				-0.2
69,596	+				-0.3
69,596	+				-1.7
69,596	+				+0.7
69,597	-				-1.1
69,597	-				+0.0
69,695	+				+0.3
69,695	+				-0.3
69,695	+				-0.7
69,695	+				-0.6
69,695	+				-0.7
69,696	-				-1.1
69,696	-				+0.7
69,696	-				-0.2
69,710	+				-2.2
69,711	-				-0.8
69,728	+				-0.9
69,729	-				-0.1
69,729	-				+0.8
69,767	+				+1.4
69,785	+				-0.6
69,839	+				-1.0
69,840	-				-0.7
69,840	-				-0.4
69,865	+				+2.4
69,865	+				-0.7
69,879	+				-1.6
69,880	-				+0.6
69,891	+		MPMX19_05391	0.11	-1.5
69,891	+		MPMX19_05391	0.11	-1.0
69,892	-		MPMX19_05391	0.11	-0.5
69,909	+		MPMX19_05391	0.12	-1.4
69,968	-		MPMX19_05391	0.18	+0.5
69,968	-		MPMX19_05391	0.18	+0.3
69,991	+		MPMX19_05391	0.21	-1.4
69,992	-		MPMX19_05391	0.21	-0.5
70,007	+		MPMX19_05391	0.22	-1.9
70,025	-		MPMX19_05391	0.24	-0.2
70,047	+		MPMX19_05391	0.26	+0.5
70,050	-		MPMX19_05391	0.26	-0.7
70,054	+		MPMX19_05391	0.27	-0.0
70,054	+		MPMX19_05391	0.27	+1.3
70,055	-		MPMX19_05391	0.27	-0.7
70,099	+		MPMX19_05391	0.31	-1.2
70,100	-		MPMX19_05391	0.31	-1.7
70,100	-		MPMX19_05391	0.31	+1.0
70,100	-		MPMX19_05391	0.31	-2.3
70,100	-		MPMX19_05391	0.31	-1.8
70,136	-		MPMX19_05391	0.35	-0.7
70,136	-		MPMX19_05391	0.35	+1.7
70,157	-		MPMX19_05391	0.37	-0.5
70,164	-		MPMX19_05391	0.38	+0.1
70,481	+		MPMX19_05391	0.69	-1.5
70,481	+		MPMX19_05391	0.69	+0.3
70,481	+		MPMX19_05391	0.69	+0.5
70,482	-		MPMX19_05391	0.69	+1.4
70,482	-		MPMX19_05391	0.69	-1.0
70,489	+		MPMX19_05391	0.70	-0.7
70,489	+		MPMX19_05391	0.70	-1.0
70,489	+		MPMX19_05391	0.70	+0.1
70,490	-		MPMX19_05391	0.70	+0.8
70,490	-		MPMX19_05391	0.70	-0.7
70,490	-		MPMX19_05391	0.70	-1.9
70,490	-		MPMX19_05391	0.70	+0.1
70,490	-		MPMX19_05391	0.70	-0.7
70,490	-		MPMX19_05391	0.70	+0.1
70,491	+		MPMX19_05391	0.70	+0.4
70,491	+		MPMX19_05391	0.70	+2.8
70,491	+		MPMX19_05391	0.70	-0.2
70,491	+		MPMX19_05391	0.70	-0.7
70,491	+		MPMX19_05391	0.70	+1.0
70,491	+		MPMX19_05391	0.70	+0.8
70,492	-		MPMX19_05391	0.70	+0.3
70,492	-		MPMX19_05391	0.70	-0.8
70,492	-		MPMX19_05391	0.70	-0.2
70,493	+		MPMX19_05391	0.70	+1.6
70,493	+		MPMX19_05391	0.70	+0.4
70,493	+		MPMX19_05391	0.70	-0.1
70,493	+		MPMX19_05391	0.70	-1.0
70,493	+		MPMX19_05391	0.70	+1.4
70,493	+		MPMX19_05391	0.70	-1.7
70,493	+		MPMX19_05391	0.70	-1.0
70,493	+		MPMX19_05391	0.70	-0.5
70,493	+		MPMX19_05391	0.70	-0.2
70,493	+		MPMX19_05391	0.70	+0.3
70,493	+		MPMX19_05391	0.70	-0.2
70,493	+		MPMX19_05391	0.70	-1.6
70,493	+		MPMX19_05391	0.70	-0.5
70,493	+		MPMX19_05391	0.70	+0.4
70,493	+		MPMX19_05391	0.70	-0.7
70,493	+		MPMX19_05391	0.70	-0.7
70,493	+		MPMX19_05391	0.70	+0.0
70,493	+		MPMX19_05391	0.70	-1.2
70,493	+		MPMX19_05391	0.70	-1.2
70,493	+		MPMX19_05391	0.70	+0.1
70,493	+		MPMX19_05391	0.70	-1.2
70,493	+		MPMX19_05391	0.70	+0.4
70,493	+		MPMX19_05391	0.70	+0.1
70,493	+		MPMX19_05391	0.70	-1.0
70,493	+		MPMX19_05391	0.70	+0.8
70,494	-		MPMX19_05391	0.70	+1.3
70,494	-		MPMX19_05391	0.70	+0.3
70,494	-		MPMX19_05391	0.70	+1.3
70,494	-		MPMX19_05391	0.70	+0.3
70,494	-		MPMX19_05391	0.70	-0.2
70,494	-		MPMX19_05391	0.70	-0.4
70,494	-		MPMX19_05391	0.70	+0.3
70,494	-		MPMX19_05391	0.70	-0.6
70,494	-		MPMX19_05391	0.70	-1.0
70,551	+		MPMX19_05391	0.76	+0.2
70,551	+		MPMX19_05391	0.76	-1.2
70,551	+		MPMX19_05391	0.76	+0.1
70,551	+		MPMX19_05391	0.76	-1.2
70,551	+		MPMX19_05391	0.76	-2.0
70,551	+		MPMX19_05391	0.76	-0.4
70,552	-		MPMX19_05391	0.76	-0.0
70,552	-		MPMX19_05391	0.76	-0.6
70,552	-		MPMX19_05391	0.76	-0.6
70,552	-		MPMX19_05391	0.76	-2.0
70,552	-		MPMX19_05391	0.76	+0.8
70,555	+		MPMX19_05391	0.76	-1.1
70,555	+		MPMX19_05391	0.76	-1.3
70,555	+		MPMX19_05391	0.76	+0.4
70,555	+		MPMX19_05391	0.76	-1.0
70,555	+		MPMX19_05391	0.76	+1.8
70,555	+		MPMX19_05391	0.76	-1.0
70,555	+		MPMX19_05391	0.76	-0.2
70,555	+		MPMX19_05391	0.76	-0.6
70,555	+		MPMX19_05391	0.76	-0.7
70,555	+		MPMX19_05391	0.76	-0.5
70,555	+		MPMX19_05391	0.76	+1.8
70,555	+		MPMX19_05391	0.76	-0.0
70,556	-		MPMX19_05391	0.77	-1.0
70,556	-		MPMX19_05391	0.77	-1.7
70,556	-		MPMX19_05391	0.77	-0.3
70,556	-		MPMX19_05391	0.77	-2.0
70,556	-		MPMX19_05391	0.77	-1.3
70,556	-		MPMX19_05391	0.77	-0.4
70,556	-		MPMX19_05391	0.77	-1.0
70,556	-		MPMX19_05391	0.77	-1.0
70,556	-		MPMX19_05391	0.77	+1.8
70,556	-		MPMX19_05391	0.77	-0.2
70,556	-		MPMX19_05391	0.77	-0.5
70,556	-		MPMX19_05391	0.77	-2.6
70,622	+		MPMX19_05391	0.83	+0.8
70,622	+		MPMX19_05391	0.83	-2.6
70,623	-		MPMX19_05391	0.83	-0.7
70,623	-		MPMX19_05391	0.83	-1.3
70,623	-		MPMX19_05391	0.83	-1.3
70,743	+				-0.9
70,743	+				+0.3
70,743	+				+0.5
70,743	+				-1.2
70,743	+				+0.0
70,743	+				+0.4
70,743	+				+1.6
70,743	+				-0.2
70,744	-				-0.6
70,745	+				-0.2
70,745	+				-1.7
70,745	+				+0.8
70,745	+				-0.3
70,746	-				-0.5
70,746	-				-1.1
70,746	-				-0.8
70,746	-				+1.3
70,746	-				-0.5
70,746	-				-0.6
70,746	-				+0.1
70,746	-				-0.0
70,746	-				+0.3
70,746	-				-1.9
70,746	-				-1.3
70,746	-				-0.2
70,746	-				+1.6
70,746	-				-0.2
70,746	-				-0.9
70,746	-				-0.6
70,774	-				+0.6
70,820	+				+1.8
70,820	+				+2.2
70,820	+				+0.3
70,820	+				+0.4
70,820	+				-0.6
70,820	+				-0.9
70,820	+				-0.4
70,820	+				-0.5
70,820	+				-2.0
70,820	+				-1.2
70,821	-				+0.8
70,821	-				-1.6
70,821	-				-2.1
70,857	+				-0.7
70,857	+				+0.0
70,857	+				-1.0
70,868	-				-1.9
70,868	-				-1.3
70,886	+				+1.3
70,887	-				+0.3
70,887	-				-0.7
70,901	+		MPMX19_05392	0.11	-0.7
70,901	+		MPMX19_05392	0.11	-0.9
70,901	+		MPMX19_05392	0.11	+0.3
70,902	-		MPMX19_05392	0.11	-1.0
70,909	+		MPMX19_05392	0.11	-0.9
70,909	+		MPMX19_05392	0.11	-2.0
70,909	+		MPMX19_05392	0.11	-1.0
70,909	+		MPMX19_05392	0.11	-1.0
70,909	+		MPMX19_05392	0.11	-1.5
70,909	+		MPMX19_05392	0.11	-0.2
70,909	+		MPMX19_05392	0.11	-0.0
70,909	+		MPMX19_05392	0.11	-1.0
70,910	-		MPMX19_05392	0.11	-1.7
70,910	-		MPMX19_05392	0.11	-1.6
70,910	-		MPMX19_05392	0.11	-0.3
70,910	-		MPMX19_05392	0.11	-1.7
70,910	-		MPMX19_05392	0.11	-0.5
70,910	-		MPMX19_05392	0.11	-0.4
70,980	+		MPMX19_05392	0.18	-1.2
70,981	-		MPMX19_05392	0.18	+0.2
70,993	+		MPMX19_05392	0.19	+0.1
70,993	+		MPMX19_05392	0.19	+0.3
70,993	+		MPMX19_05392	0.19	-1.0
70,993	+		MPMX19_05392	0.19	+1.1
70,993	+		MPMX19_05392	0.19	-2.6
70,993	+		MPMX19_05392	0.19	-0.0
70,993	+		MPMX19_05392	0.19	-0.2
70,993	+		MPMX19_05392	0.19	+0.2
70,993	+		MPMX19_05392	0.19	+0.2
70,993	+		MPMX19_05392	0.19	-0.8
70,993	+		MPMX19_05392	0.19	-1.7
70,993	+		MPMX19_05392	0.19	-0.1
70,994	-		MPMX19_05392	0.19	+1.0
70,994	-		MPMX19_05392	0.19	-2.1
70,994	-		MPMX19_05392	0.19	-2.2
70,994	-		MPMX19_05392	0.19	+0.5
70,994	-		MPMX19_05392	0.19	-0.7
70,994	-		MPMX19_05392	0.19	-0.9
70,994	-		MPMX19_05392	0.19	-0.2
70,994	-		MPMX19_05392	0.19	-0.7
70,994	-		MPMX19_05392	0.19	-0.7
70,994	-		MPMX19_05392	0.19	-2.0
70,994	-		MPMX19_05392	0.19	-0.3
70,994	-		MPMX19_05392	0.19	-0.2
70,994	-		MPMX19_05392	0.19	-0.7
70,994	-		MPMX19_05392	0.19	-2.6
71,004	-		MPMX19_05392	0.20	-1.3
71,024	-		MPMX19_05392	0.22	-0.2
71,024	-		MPMX19_05392	0.22	+0.8
71,024	-		MPMX19_05392	0.22	-0.6
71,115	-		MPMX19_05392	0.30	-1.0
71,161	+		MPMX19_05392	0.35	-0.5
71,229	-		MPMX19_05392	0.41	-1.2
71,229	-		MPMX19_05392	0.41	-2.2
71,230	+		MPMX19_05392	0.41	-0.2
71,231	-		MPMX19_05392	0.41	-1.6
71,231	-		MPMX19_05392	0.41	-0.9
71,277	+		MPMX19_05392	0.46	-2.7
71,277	+		MPMX19_05392	0.46	+0.4
71,278	-		MPMX19_05392	0.46	-0.5
71,278	-		MPMX19_05392	0.46	+0.3
71,373	+		MPMX19_05392	0.54	+1.1
71,373	+		MPMX19_05392	0.54	-0.8
71,511	-		MPMX19_05392	0.67	+1.3
71,538	+		MPMX19_05392	0.70	-0.3
71,539	-		MPMX19_05392	0.70	+0.5
71,650	+		MPMX19_05392	0.80	+0.5
71,651	-		MPMX19_05392	0.80	-0.5
71,736	-		MPMX19_05392	0.88	-0.6
71,765	+				-1.4
71,765	+				-0.4
71,788	+				+0.1
71,789	-				-1.2