Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05245 and MPMX19_05246 are separated by 175 nucleotides MPMX19_05246 and MPMX19_05247 overlap by 35 nucleotides
MPMX19_05245: MPMX19_05245 - Trifunctional nucleotide phosphoesterase protein YfkN, at 774,709 to 776,223
_05245
MPMX19_05246: MPMX19_05246 - Carbamoyl-phosphate synthase small chain, at 776,399 to 777,097
_05246
MPMX19_05247: MPMX19_05247 - Molybdenum cofactor guanylyltransferase, at 777,063 to 778,721
_05247
Position (kb) 776
777
778 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 775.460 kb on - strand, within MPMX19_05245 at 775.472 kb on + strand, within MPMX19_05245 at 775.473 kb on - strand, within MPMX19_05245 at 775.473 kb on - strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.517 kb on + strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 775.518 kb on - strand, within MPMX19_05245 at 776.101 kb on + strand at 776.101 kb on + strand at 776.102 kb on - strand at 776.102 kb on - strand at 776.108 kb on + strand at 776.108 kb on + strand at 776.108 kb on + strand at 776.108 kb on + strand at 776.108 kb on + strand at 776.109 kb on - strand at 776.109 kb on - strand at 776.109 kb on - strand at 776.109 kb on - strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.125 kb on + strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.126 kb on - strand at 776.260 kb on + strand at 776.260 kb on + strand at 776.260 kb on + strand at 776.260 kb on + strand at 776.260 kb on + strand at 776.260 kb on + strand at 776.260 kb on + strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.261 kb on - strand at 776.318 kb on + strand at 776.372 kb on + strand at 776.372 kb on + strand at 776.372 kb on + strand at 776.373 kb on - strand at 776.531 kb on + strand, within MPMX19_05246 at 776.532 kb on - strand, within MPMX19_05246 at 776.532 kb on - strand, within MPMX19_05246 at 776.687 kb on + strand, within MPMX19_05246 at 776.688 kb on - strand, within MPMX19_05246 at 776.702 kb on + strand, within MPMX19_05246 at 776.703 kb on - strand, within MPMX19_05246 at 776.816 kb on + strand, within MPMX19_05246 at 776.816 kb on + strand, within MPMX19_05246 at 776.816 kb on + strand, within MPMX19_05246 at 776.816 kb on + strand, within MPMX19_05246 at 776.817 kb on - strand, within MPMX19_05246 at 776.817 kb on - strand, within MPMX19_05246 at 776.817 kb on - strand, within MPMX19_05246 at 776.858 kb on + strand, within MPMX19_05246 at 776.858 kb on + strand, within MPMX19_05246 at 776.858 kb on + strand, within MPMX19_05246 at 776.859 kb on - strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.906 kb on + strand, within MPMX19_05246 at 776.907 kb on + strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 776.907 kb on - strand, within MPMX19_05246 at 777.028 kb on + strand at 777.029 kb on - strand at 777.029 kb on - strand at 777.029 kb on - strand at 777.029 kb on - strand at 777.064 kb on + strand at 777.064 kb on + strand at 777.064 kb on + strand at 777.064 kb on + strand at 777.064 kb on + strand at 777.064 kb on + strand at 777.065 kb on - strand at 777.065 kb on - strand at 777.157 kb on + strand at 777.157 kb on + strand at 777.157 kb on + strand at 777.157 kb on + strand at 777.158 kb on - strand at 777.158 kb on - strand at 777.158 kb on - strand at 777.346 kb on + strand, within MPMX19_05247 at 777.346 kb on + strand, within MPMX19_05247 at 777.346 kb on + strand, within MPMX19_05247 at 777.347 kb on - strand, within MPMX19_05247 at 777.461 kb on + strand, within MPMX19_05247 at 777.461 kb on + strand, within MPMX19_05247 at 777.461 kb on + strand, within MPMX19_05247 at 777.461 kb on + strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247 at 777.462 kb on - strand, within MPMX19_05247
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 775,460 - MPMX19_05245 0.50 +0.3 775,472 + MPMX19_05245 0.50 +1.2 775,473 - MPMX19_05245 0.50 +1.0 775,473 - MPMX19_05245 0.50 -0.7 775,517 + MPMX19_05245 0.53 -1.1 775,517 + MPMX19_05245 0.53 -0.0 775,517 + MPMX19_05245 0.53 +0.4 775,517 + MPMX19_05245 0.53 -0.0 775,517 + MPMX19_05245 0.53 +0.7 775,517 + MPMX19_05245 0.53 -1.2 775,517 + MPMX19_05245 0.53 -0.2 775,517 + MPMX19_05245 0.53 -1.0 775,517 + MPMX19_05245 0.53 +0.1 775,517 + MPMX19_05245 0.53 -0.7 775,517 + MPMX19_05245 0.53 +1.4 775,517 + MPMX19_05245 0.53 +0.3 775,517 + MPMX19_05245 0.53 -0.0 775,518 - MPMX19_05245 0.53 -0.9 775,518 - MPMX19_05245 0.53 +0.3 775,518 - MPMX19_05245 0.53 +0.1 775,518 - MPMX19_05245 0.53 -0.5 775,518 - MPMX19_05245 0.53 -0.6 775,518 - MPMX19_05245 0.53 +1.8 775,518 - MPMX19_05245 0.53 +0.7 775,518 - MPMX19_05245 0.53 -0.5 776,101 + +0.5 776,101 + +0.1 776,102 - +0.7 776,102 - -1.6 776,108 + -0.1 776,108 + +0.3 776,108 + -0.9 776,108 + -1.0 776,108 + -1.1 776,109 - -0.5 776,109 - -0.8 776,109 - +0.7 776,109 - +0.7 776,125 + +0.2 776,125 + +1.7 776,125 + -1.1 776,125 + -0.9 776,125 + -1.1 776,125 + -0.0 776,125 + -1.9 776,125 + -0.7 776,125 + +0.1 776,125 + -0.3 776,126 - -1.8 776,126 - -0.0 776,126 - -1.2 776,126 - -2.0 776,126 - +0.9 776,126 - +0.1 776,126 - -1.2 776,126 - -2.2 776,126 - -1.3 776,126 - +0.5 776,126 - -0.7 776,126 - +0.1 776,126 - +0.2 776,260 + -0.1 776,260 + -1.0 776,260 + -0.9 776,260 + -1.5 776,260 + -1.3 776,260 + -0.1 776,260 + -0.4 776,261 - -1.8 776,261 - -0.2 776,261 - -1.3 776,261 - -1.1 776,261 - +0.4 776,261 - -1.3 776,261 - -1.0 776,261 - -0.0 776,261 - +0.3 776,261 - +0.1 776,261 - +0.2 776,261 - +0.3 776,261 - -0.1 776,318 + -0.8 776,372 + +0.7 776,372 + +0.1 776,372 + -0.4 776,373 - +0.3 776,531 + MPMX19_05246 0.19 -0.3 776,532 - MPMX19_05246 0.19 -1.8 776,532 - MPMX19_05246 0.19 -0.3 776,687 + MPMX19_05246 0.41 +1.4 776,688 - MPMX19_05246 0.41 -0.9 776,702 + MPMX19_05246 0.43 +0.4 776,703 - MPMX19_05246 0.43 -0.3 776,816 + MPMX19_05246 0.60 +0.2 776,816 + MPMX19_05246 0.60 -0.6 776,816 + MPMX19_05246 0.60 +0.1 776,816 + MPMX19_05246 0.60 +0.3 776,817 - MPMX19_05246 0.60 +0.3 776,817 - MPMX19_05246 0.60 +0.3 776,817 - MPMX19_05246 0.60 -0.1 776,858 + MPMX19_05246 0.66 +0.9 776,858 + MPMX19_05246 0.66 -2.6 776,858 + MPMX19_05246 0.66 +0.1 776,859 - MPMX19_05246 0.66 +1.0 776,906 + MPMX19_05246 0.73 -1.4 776,906 + MPMX19_05246 0.73 -1.1 776,906 + MPMX19_05246 0.73 -0.7 776,906 + MPMX19_05246 0.73 +0.9 776,906 + MPMX19_05246 0.73 +0.5 776,906 + MPMX19_05246 0.73 -0.7 776,906 + MPMX19_05246 0.73 +0.6 776,906 + MPMX19_05246 0.73 -0.6 776,906 + MPMX19_05246 0.73 -2.4 776,906 + MPMX19_05246 0.73 +1.7 776,906 + MPMX19_05246 0.73 -1.1 776,906 + MPMX19_05246 0.73 +0.7 776,906 + MPMX19_05246 0.73 +0.7 776,906 + MPMX19_05246 0.73 -1.1 776,906 + MPMX19_05246 0.73 -1.8 776,906 + MPMX19_05246 0.73 -0.7 776,906 + MPMX19_05246 0.73 +0.8 776,906 + MPMX19_05246 0.73 -1.3 776,906 + MPMX19_05246 0.73 +0.4 776,906 + MPMX19_05246 0.73 +0.2 776,906 + MPMX19_05246 0.73 -0.2 776,907 + MPMX19_05246 0.73 -1.8 776,907 - MPMX19_05246 0.73 -1.9 776,907 - MPMX19_05246 0.73 +1.0 776,907 - MPMX19_05246 0.73 +0.1 776,907 - MPMX19_05246 0.73 -0.2 776,907 - MPMX19_05246 0.73 -0.0 776,907 - MPMX19_05246 0.73 -1.8 776,907 - MPMX19_05246 0.73 -1.9 776,907 - MPMX19_05246 0.73 +1.2 776,907 - MPMX19_05246 0.73 -0.1 776,907 - MPMX19_05246 0.73 -1.1 776,907 - MPMX19_05246 0.73 -0.5 776,907 - MPMX19_05246 0.73 +0.5 776,907 - MPMX19_05246 0.73 +0.1 776,907 - MPMX19_05246 0.73 +0.4 776,907 - MPMX19_05246 0.73 -1.0 776,907 - MPMX19_05246 0.73 -1.3 776,907 - MPMX19_05246 0.73 -0.2 776,907 - MPMX19_05246 0.73 +0.1 776,907 - MPMX19_05246 0.73 -1.9 777,028 + +1.7 777,029 - -0.4 777,029 - -0.6 777,029 - -1.3 777,029 - +0.1 777,064 + -0.4 777,064 + -0.7 777,064 + -1.3 777,064 + -0.6 777,064 + -0.0 777,064 + +0.3 777,065 - -0.3 777,065 - -0.9 777,157 + -2.0 777,157 + +0.1 777,157 + +1.3 777,157 + -0.9 777,158 - -0.0 777,158 - -0.3 777,158 - +1.2 777,346 + MPMX19_05247 0.17 -0.5 777,346 + MPMX19_05247 0.17 +0.0 777,346 + MPMX19_05247 0.17 +0.6 777,347 - MPMX19_05247 0.17 -0.1 777,461 + MPMX19_05247 0.24 +0.2 777,461 + MPMX19_05247 0.24 -0.3 777,461 + MPMX19_05247 0.24 -0.8 777,461 + MPMX19_05247 0.24 +0.6 777,462 - MPMX19_05247 0.24 -1.0 777,462 - MPMX19_05247 0.24 -1.1 777,462 - MPMX19_05247 0.24 -1.6 777,462 - MPMX19_05247 0.24 -1.1 777,462 - MPMX19_05247 0.24 -3.0 777,462 - MPMX19_05247 0.24 -1.8 777,462 - MPMX19_05247 0.24 +0.5 777,462 - MPMX19_05247 0.24 -1.1
Or see this region's nucleotide sequence