Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05051 and MPMX19_05052 are separated by 73 nucleotides MPMX19_05052 and MPMX19_05053 are separated by 94 nucleotides
MPMX19_05051: MPMX19_05051 - Aromatic amino acid exporter YddG, at 535,950 to 536,924
_05051
MPMX19_05052: MPMX19_05052 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 536,998 to 538,386
_05052
MPMX19_05053: MPMX19_05053 - hypothetical protein, at 538,481 to 539,254
_05053
Position (kb) 536
537
538
539 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 536.086 kb on + strand, within MPMX19_05051 at 536.086 kb on + strand, within MPMX19_05051 at 536.086 kb on + strand, within MPMX19_05051 at 536.086 kb on + strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.087 kb on - strand, within MPMX19_05051 at 536.128 kb on + strand, within MPMX19_05051 at 536.329 kb on + strand, within MPMX19_05051 at 536.329 kb on + strand, within MPMX19_05051 at 536.330 kb on - strand, within MPMX19_05051 at 536.330 kb on - strand, within MPMX19_05051 at 536.330 kb on - strand, within MPMX19_05051 at 536.368 kb on + strand, within MPMX19_05051 at 536.368 kb on + strand, within MPMX19_05051 at 536.369 kb on - strand, within MPMX19_05051 at 536.369 kb on - strand, within MPMX19_05051 at 536.369 kb on - strand, within MPMX19_05051 at 536.369 kb on - strand, within MPMX19_05051 at 536.369 kb on - strand, within MPMX19_05051 at 536.369 kb on - strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.542 kb on + strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.543 kb on - strand, within MPMX19_05051 at 536.611 kb on + strand, within MPMX19_05051 at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.936 kb on + strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.937 kb on - strand at 536.941 kb on + strand at 536.941 kb on + strand at 536.942 kb on - strand at 537.191 kb on + strand, within MPMX19_05052 at 537.191 kb on + strand, within MPMX19_05052 at 537.191 kb on + strand, within MPMX19_05052 at 537.192 kb on - strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.356 kb on + strand, within MPMX19_05052 at 537.357 kb on - strand, within MPMX19_05052 at 537.357 kb on - strand, within MPMX19_05052 at 537.357 kb on - strand, within MPMX19_05052 at 537.357 kb on - strand, within MPMX19_05052 at 537.357 kb on - strand, within MPMX19_05052 at 537.357 kb on - strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.857 kb on + strand, within MPMX19_05052 at 537.858 kb on - strand, within MPMX19_05052 at 537.858 kb on - strand, within MPMX19_05052 at 537.858 kb on - strand, within MPMX19_05052 at 537.968 kb on + strand, within MPMX19_05052 at 537.968 kb on + strand, within MPMX19_05052 at 537.969 kb on - strand, within MPMX19_05052 at 537.969 kb on - strand, within MPMX19_05052 at 537.969 kb on - strand, within MPMX19_05052 at 537.969 kb on - strand, within MPMX19_05052 at 537.969 kb on - strand, within MPMX19_05052 at 537.969 kb on - strand, within MPMX19_05052 at 538.094 kb on + strand, within MPMX19_05052 at 538.094 kb on + strand, within MPMX19_05052 at 538.094 kb on + strand, within MPMX19_05052 at 538.094 kb on + strand, within MPMX19_05052 at 538.094 kb on + strand, within MPMX19_05052 at 538.094 kb on + strand, within MPMX19_05052 at 538.095 kb on - strand, within MPMX19_05052 at 538.095 kb on - strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.109 kb on + strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.110 kb on - strand, within MPMX19_05052 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.599 kb on + strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.600 kb on - strand, within MPMX19_05053 at 538.720 kb on - strand, within MPMX19_05053 at 538.749 kb on + strand, within MPMX19_05053 at 538.749 kb on + strand, within MPMX19_05053 at 538.750 kb on - strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.764 kb on + strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.765 kb on - strand, within MPMX19_05053 at 538.818 kb on + strand, within MPMX19_05053 at 538.818 kb on + strand, within MPMX19_05053 at 538.818 kb on + strand, within MPMX19_05053 at 538.818 kb on + strand, within MPMX19_05053 at 538.819 kb on - strand, within MPMX19_05053 at 538.819 kb on - strand, within MPMX19_05053 at 538.833 kb on + strand, within MPMX19_05053 at 538.833 kb on + strand, within MPMX19_05053 at 538.834 kb on - strand, within MPMX19_05053 at 538.834 kb on - strand, within MPMX19_05053 at 538.834 kb on - strand, within MPMX19_05053 at 538.834 kb on - strand, within MPMX19_05053 at 538.980 kb on + strand, within MPMX19_05053 at 538.981 kb on - strand, within MPMX19_05053 at 538.981 kb on - strand, within MPMX19_05053 at 539.040 kb on + strand, within MPMX19_05053 at 539.040 kb on + strand, within MPMX19_05053 at 539.040 kb on + strand, within MPMX19_05053 at 539.041 kb on - strand, within MPMX19_05053 at 539.041 kb on - strand, within MPMX19_05053 at 539.306 kb on + strand at 539.306 kb on + strand at 539.306 kb on + strand at 539.306 kb on + strand at 539.306 kb on + strand at 539.306 kb on + strand at 539.307 kb on - strand at 539.307 kb on - strand at 539.309 kb on - strand at 539.309 kb on - strand at 539.309 kb on - strand at 539.322 kb on + strand at 539.322 kb on + strand at 539.322 kb on + strand at 539.322 kb on + strand at 539.323 kb on - strand at 539.328 kb on + strand at 539.328 kb on + strand at 539.328 kb on + strand at 539.329 kb on - strand at 539.342 kb on + strand at 539.342 kb on + strand at 539.343 kb on - strand at 539.343 kb on - strand at 539.343 kb on - strand at 539.343 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.345 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand at 539.351 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 536,086 + MPMX19_05051 0.14 +0.4 536,086 + MPMX19_05051 0.14 +0.1 536,086 + MPMX19_05051 0.14 -0.6 536,086 + MPMX19_05051 0.14 -1.0 536,087 - MPMX19_05051 0.14 -1.6 536,087 - MPMX19_05051 0.14 +1.4 536,087 - MPMX19_05051 0.14 -0.2 536,087 - MPMX19_05051 0.14 -1.3 536,087 - MPMX19_05051 0.14 -1.3 536,087 - MPMX19_05051 0.14 +0.8 536,087 - MPMX19_05051 0.14 +1.2 536,087 - MPMX19_05051 0.14 -1.0 536,128 + MPMX19_05051 0.18 -0.1 536,329 + MPMX19_05051 0.39 +0.2 536,329 + MPMX19_05051 0.39 +0.2 536,330 - MPMX19_05051 0.39 +0.4 536,330 - MPMX19_05051 0.39 +0.4 536,330 - MPMX19_05051 0.39 -1.0 536,368 + MPMX19_05051 0.43 -0.4 536,368 + MPMX19_05051 0.43 -0.2 536,369 - MPMX19_05051 0.43 -1.0 536,369 - MPMX19_05051 0.43 +0.2 536,369 - MPMX19_05051 0.43 +0.4 536,369 - MPMX19_05051 0.43 +0.3 536,369 - MPMX19_05051 0.43 -0.8 536,369 - MPMX19_05051 0.43 -0.2 536,542 + MPMX19_05051 0.61 +0.0 536,542 + MPMX19_05051 0.61 -2.1 536,542 + MPMX19_05051 0.61 -0.8 536,542 + MPMX19_05051 0.61 -1.0 536,542 + MPMX19_05051 0.61 -1.4 536,542 + MPMX19_05051 0.61 -2.5 536,542 + MPMX19_05051 0.61 +0.2 536,542 + MPMX19_05051 0.61 +0.2 536,543 - MPMX19_05051 0.61 -1.0 536,543 - MPMX19_05051 0.61 -2.5 536,543 - MPMX19_05051 0.61 -1.8 536,543 - MPMX19_05051 0.61 +0.3 536,543 - MPMX19_05051 0.61 -1.3 536,543 - MPMX19_05051 0.61 -1.1 536,543 - MPMX19_05051 0.61 -0.4 536,543 - MPMX19_05051 0.61 -0.8 536,543 - MPMX19_05051 0.61 +1.8 536,543 - MPMX19_05051 0.61 +0.6 536,543 - MPMX19_05051 0.61 +1.0 536,543 - MPMX19_05051 0.61 +2.4 536,611 + MPMX19_05051 0.68 -1.0 536,936 + +0.6 536,936 + +0.4 536,936 + -0.0 536,936 + +0.1 536,936 + -1.8 536,936 + +0.8 536,936 + -1.2 536,936 + -0.2 536,936 + -0.2 536,936 + +1.8 536,936 + -0.5 536,936 + +0.2 536,936 + -0.9 536,936 + -0.9 536,937 - +0.4 536,937 - -1.2 536,937 - -0.2 536,937 - -0.2 536,937 - -1.0 536,937 - -1.6 536,937 - -0.1 536,937 - -1.1 536,937 - -1.0 536,937 - -0.0 536,937 - -0.8 536,937 - -0.4 536,937 - -1.2 536,937 - +1.4 536,937 - +0.2 536,937 - -1.9 536,937 - -1.5 536,937 - -0.1 536,937 - +0.4 536,937 - +1.5 536,937 - +0.8 536,937 - +0.3 536,941 + +0.6 536,941 + +0.0 536,942 - -0.2 537,191 + MPMX19_05052 0.14 -0.7 537,191 + MPMX19_05052 0.14 -0.0 537,191 + MPMX19_05052 0.14 -0.0 537,192 - MPMX19_05052 0.14 +0.3 537,356 + MPMX19_05052 0.26 -1.4 537,356 + MPMX19_05052 0.26 +0.8 537,356 + MPMX19_05052 0.26 -2.3 537,356 + MPMX19_05052 0.26 +0.6 537,356 + MPMX19_05052 0.26 +0.2 537,356 + MPMX19_05052 0.26 +0.4 537,356 + MPMX19_05052 0.26 -0.8 537,357 - MPMX19_05052 0.26 +0.4 537,357 - MPMX19_05052 0.26 +0.4 537,357 - MPMX19_05052 0.26 -0.6 537,357 - MPMX19_05052 0.26 -0.3 537,357 - MPMX19_05052 0.26 -0.0 537,357 - MPMX19_05052 0.26 -1.6 537,857 + MPMX19_05052 0.62 -1.0 537,857 + MPMX19_05052 0.62 -0.2 537,857 + MPMX19_05052 0.62 +0.4 537,857 + MPMX19_05052 0.62 +0.3 537,857 + MPMX19_05052 0.62 -0.2 537,857 + MPMX19_05052 0.62 -0.2 537,857 + MPMX19_05052 0.62 +0.4 537,857 + MPMX19_05052 0.62 +1.6 537,857 + MPMX19_05052 0.62 -1.7 537,858 - MPMX19_05052 0.62 -0.6 537,858 - MPMX19_05052 0.62 -0.0 537,858 - MPMX19_05052 0.62 -0.6 537,968 + MPMX19_05052 0.70 -0.3 537,968 + MPMX19_05052 0.70 -0.2 537,969 - MPMX19_05052 0.70 +0.1 537,969 - MPMX19_05052 0.70 -0.1 537,969 - MPMX19_05052 0.70 -0.2 537,969 - MPMX19_05052 0.70 -1.6 537,969 - MPMX19_05052 0.70 -1.5 537,969 - MPMX19_05052 0.70 -0.0 538,094 + MPMX19_05052 0.79 +0.8 538,094 + MPMX19_05052 0.79 -1.1 538,094 + MPMX19_05052 0.79 -0.2 538,094 + MPMX19_05052 0.79 -0.2 538,094 + MPMX19_05052 0.79 -0.0 538,094 + MPMX19_05052 0.79 +0.3 538,095 - MPMX19_05052 0.79 -0.2 538,095 - MPMX19_05052 0.79 -1.6 538,109 + MPMX19_05052 0.80 -1.2 538,109 + MPMX19_05052 0.80 -0.4 538,109 + MPMX19_05052 0.80 -0.5 538,109 + MPMX19_05052 0.80 -0.0 538,109 + MPMX19_05052 0.80 +1.3 538,109 + MPMX19_05052 0.80 +0.1 538,109 + MPMX19_05052 0.80 +0.1 538,110 - MPMX19_05052 0.80 +0.4 538,110 - MPMX19_05052 0.80 -1.0 538,110 - MPMX19_05052 0.80 +0.8 538,110 - MPMX19_05052 0.80 -0.1 538,110 - MPMX19_05052 0.80 +0.2 538,110 - MPMX19_05052 0.80 -1.2 538,110 - MPMX19_05052 0.80 -0.2 538,110 - MPMX19_05052 0.80 -0.4 538,599 + MPMX19_05053 0.15 -0.8 538,599 + MPMX19_05053 0.15 -0.8 538,599 + MPMX19_05053 0.15 -1.6 538,599 + MPMX19_05053 0.15 +0.3 538,599 + MPMX19_05053 0.15 -0.5 538,599 + MPMX19_05053 0.15 -2.2 538,599 + MPMX19_05053 0.15 -0.4 538,599 + MPMX19_05053 0.15 +0.0 538,600 - MPMX19_05053 0.15 -0.4 538,600 - MPMX19_05053 0.15 -0.4 538,600 - MPMX19_05053 0.15 -0.7 538,600 - MPMX19_05053 0.15 -0.1 538,600 - MPMX19_05053 0.15 +0.3 538,600 - MPMX19_05053 0.15 -0.7 538,600 - MPMX19_05053 0.15 -0.3 538,600 - MPMX19_05053 0.15 -0.4 538,600 - MPMX19_05053 0.15 +0.5 538,720 - MPMX19_05053 0.31 -0.2 538,749 + MPMX19_05053 0.35 -0.1 538,749 + MPMX19_05053 0.35 -1.0 538,750 - MPMX19_05053 0.35 -0.3 538,764 + MPMX19_05053 0.37 -0.8 538,764 + MPMX19_05053 0.37 +0.9 538,764 + MPMX19_05053 0.37 +1.5 538,764 + MPMX19_05053 0.37 -0.7 538,764 + MPMX19_05053 0.37 +0.6 538,764 + MPMX19_05053 0.37 -0.0 538,764 + MPMX19_05053 0.37 -0.5 538,764 + MPMX19_05053 0.37 -1.1 538,764 + MPMX19_05053 0.37 -0.8 538,764 + MPMX19_05053 0.37 +2.3 538,765 - MPMX19_05053 0.37 -0.7 538,765 - MPMX19_05053 0.37 -0.2 538,765 - MPMX19_05053 0.37 -0.5 538,765 - MPMX19_05053 0.37 -0.4 538,765 - MPMX19_05053 0.37 +0.3 538,765 - MPMX19_05053 0.37 -0.5 538,765 - MPMX19_05053 0.37 -2.3 538,765 - MPMX19_05053 0.37 -1.7 538,765 - MPMX19_05053 0.37 -0.1 538,765 - MPMX19_05053 0.37 +1.6 538,818 + MPMX19_05053 0.44 +1.0 538,818 + MPMX19_05053 0.44 -0.3 538,818 + MPMX19_05053 0.44 -1.4 538,818 + MPMX19_05053 0.44 +0.2 538,819 - MPMX19_05053 0.44 -0.6 538,819 - MPMX19_05053 0.44 -1.2 538,833 + MPMX19_05053 0.45 -1.9 538,833 + MPMX19_05053 0.45 -1.2 538,834 - MPMX19_05053 0.46 +1.3 538,834 - MPMX19_05053 0.46 -2.1 538,834 - MPMX19_05053 0.46 +1.2 538,834 - MPMX19_05053 0.46 -1.7 538,980 + MPMX19_05053 0.64 -0.7 538,981 - MPMX19_05053 0.65 -1.0 538,981 - MPMX19_05053 0.65 -1.2 539,040 + MPMX19_05053 0.72 -1.3 539,040 + MPMX19_05053 0.72 -2.8 539,040 + MPMX19_05053 0.72 +1.2 539,041 - MPMX19_05053 0.72 +0.5 539,041 - MPMX19_05053 0.72 -0.6 539,306 + +0.5 539,306 + +0.4 539,306 + +1.4 539,306 + +0.4 539,306 + +0.5 539,306 + +1.8 539,307 - -2.3 539,307 - -0.9 539,309 - -0.4 539,309 - -0.2 539,309 - -0.2 539,322 + -1.2 539,322 + -0.0 539,322 + -0.1 539,322 + -1.0 539,323 - -1.5 539,328 + -1.7 539,328 + -1.6 539,328 + -2.0 539,329 - -0.2 539,342 + -0.2 539,342 + -0.4 539,343 - -0.1 539,343 - +0.8 539,343 - -1.2 539,343 - +0.2 539,345 - -2.6 539,345 - +0.8 539,345 - -0.2 539,345 - +0.2 539,345 - -0.6 539,345 - -0.1 539,345 - -0.4 539,345 - -0.5 539,351 - +0.6 539,351 - +0.4 539,351 - -0.5 539,351 - -0.1 539,351 - -1.4 539,351 - -1.9 539,351 - -0.2 539,351 - -0.6 539,351 - -1.8 539,351 - -0.5 539,351 - +0.2 539,351 - -1.7
Or see this region's nucleotide sequence