Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04640

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
21,324	+				-0.4
21,325	-				-0.1
21,333	+				+1.3
21,333	+				-0.6
21,333	+				+0.1
21,333	+				+0.9
21,333	+				-0.3
21,334	-				-1.6
21,334	-				+0.1
21,334	-				-0.3
21,447	+				-0.7
21,447	+				-0.6
21,447	+				-1.4
21,447	+				-0.5
21,447	+				+1.4
21,448	-				-0.2
21,448	-				-0.5
21,448	-				-0.7
21,448	-				+0.5
21,448	-				-0.6
21,549	+				+0.4
21,549	+				+0.5
21,549	+				-1.5
21,549	+				-0.8
21,549	+				-3.0
21,550	-				+0.8
21,550	-				-1.2
21,550	-				-0.1
21,576	+				-1.3
21,576	+				+0.0
21,577	-				-1.9
21,577	-				-0.3
21,686	-				-0.6
21,693	+				-0.6
21,696	-				-1.1
21,696	-				-1.3
21,753	-				+0.2
21,783	-				-0.9
21,827	+				+0.1
21,902	-				-0.9
22,014	+				-0.1
22,014	+				-2.0
22,014	+				+0.1
22,014	+				-1.9
22,014	+				-0.3
22,014	+				-1.3
22,015	-				+0.4
22,015	-				-0.2
22,015	-				-1.1
22,015	-				-2.8
22,015	-				-0.9
22,015	-				-1.1
22,015	-				-0.3
22,015	-				+0.3
22,015	-				-0.3
22,015	-				-1.3
22,024	+				-0.7
22,025	-				-0.1
22,056	+				-1.7
22,056	+				+0.1
22,056	+				-0.9
22,056	+				-0.0
22,056	+				-1.0
22,056	+				+0.1
22,056	+				-0.4
22,056	+				+0.3
22,056	+				-1.6
22,057	-				-1.3
22,057	-				+0.4
22,057	-				-1.6
22,057	-				+2.1
22,279	+				+0.6
22,279	+				-1.3
22,279	+				+0.0
22,280	-				-1.3
22,411	+		MPMX19_04640	0.14	-2.2
22,411	+		MPMX19_04640	0.14	-0.4
22,411	+		MPMX19_04640	0.14	+0.5
22,412	-		MPMX19_04640	0.14	-0.9
22,412	-		MPMX19_04640	0.14	-1.1
22,470	+		MPMX19_04640	0.21	-0.1
22,470	+		MPMX19_04640	0.21	-1.0
22,470	+		MPMX19_04640	0.21	-0.2
22,471	-		MPMX19_04640	0.21	-0.3
22,710	+		MPMX19_04640	0.51	+0.2
22,711	-		MPMX19_04640	0.51	-1.1
22,711	-		MPMX19_04640	0.51	-2.1
22,803	+		MPMX19_04640	0.62	-0.1
22,803	+		MPMX19_04640	0.62	-1.7
22,803	+		MPMX19_04640	0.62	-1.0
22,804	-		MPMX19_04640	0.62	+1.5
22,804	-		MPMX19_04640	0.62	-0.9
22,890	+		MPMX19_04640	0.73	-0.0
23,082	+				-1.3
23,082	+				-2.7
23,082	+				-0.7
23,083	-				-0.8
23,083	-				+0.5
23,083	-				-0.2
23,106	+				+0.6
23,221	-				-0.5
23,221	-				+0.4
23,221	-				-0.1
23,425	-		MPMX19_04641	0.13	-0.0
23,439	+		MPMX19_04641	0.14	-1.6
23,440	-		MPMX19_04641	0.14	-0.6
23,958	+		MPMX19_04641	0.39	-0.9
23,958	+		MPMX19_04641	0.39	+0.3
23,959	-		MPMX19_04641	0.39	-1.0
23,959	-		MPMX19_04641	0.39	-0.4
23,967	+		MPMX19_04641	0.40	-0.5
23,967	+		MPMX19_04641	0.40	-1.1
23,967	+		MPMX19_04641	0.40	-0.3
23,967	+		MPMX19_04641	0.40	-0.3
23,967	+		MPMX19_04641	0.40	-1.1
23,967	+		MPMX19_04641	0.40	-0.8
23,967	+		MPMX19_04641	0.40	+0.1
23,967	+		MPMX19_04641	0.40	-0.2
23,967	+		MPMX19_04641	0.40	-1.3
23,967	+		MPMX19_04641	0.40	-0.4
23,967	+		MPMX19_04641	0.40	-0.9
23,967	+		MPMX19_04641	0.40	-1.3
23,968	-		MPMX19_04641	0.40	-1.1
23,968	-		MPMX19_04641	0.40	-0.6
23,968	-		MPMX19_04641	0.40	-0.9
23,968	-		MPMX19_04641	0.40	-0.4
23,968	-		MPMX19_04641	0.40	-0.4
23,968	-		MPMX19_04641	0.40	-0.9
23,968	-		MPMX19_04641	0.40	-0.4
23,968	-		MPMX19_04641	0.40	+0.4
23,997	+		MPMX19_04641	0.41	-0.0
23,997	+		MPMX19_04641	0.41	-0.9
23,998	-		MPMX19_04641	0.41	-0.7
23,998	-		MPMX19_04641	0.41	-0.4
23,998	-		MPMX19_04641	0.41	-0.5
23,998	-		MPMX19_04641	0.41	+2.1
23,998	-		MPMX19_04641	0.41	-1.6
23,998	-		MPMX19_04641	0.41	-1.2
24,054	+		MPMX19_04641	0.44	-1.0
24,054	+		MPMX19_04641	0.44	-1.0
24,055	-		MPMX19_04641	0.44	+0.6
24,055	-		MPMX19_04641	0.44	+0.7
24,055	-		MPMX19_04641	0.44	-0.6