Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04328

Experiment: NL-CCM, start OD=0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04327 and MPMX19_04328 overlap by 4 nucleotidesMPMX19_04328 and MPMX19_04329 are separated by 58 nucleotides MPMX19_04327: MPMX19_04327 - hypothetical protein, at 690,853 to 691,923 _04327 MPMX19_04328: MPMX19_04328 - Arginine--tRNA ligase, at 691,920 to 693,680 _04328 MPMX19_04329: MPMX19_04329 - Deoxyguanosinetriphosphate triphosphohydrolase-like protein, at 693,739 to 694,938 _04329 Position (kb) 691 692 693 694Strain fitness (log2 ratio) -2 -1 0 1at 693.813 kb on - strandat 693.813 kb on - strandat 693.813 kb on - strandat 693.813 kb on - strandat 693.813 kb on - strandat 693.871 kb on - strand, within MPMX19_04329at 693.975 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 693.984 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.311 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329at 694.509 kb on - strand, within MPMX19_04329

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1
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693,813 - -1.2
693,813 - -0.6
693,813 - +0.8
693,813 - -0.4
693,813 - +0.1
693,871 - MPMX19_04329 0.11 -0.2
693,975 - MPMX19_04329 0.20 -0.8
693,984 - MPMX19_04329 0.20 -0.9
693,984 - MPMX19_04329 0.20 -0.3
693,984 - MPMX19_04329 0.20 -0.8
693,984 - MPMX19_04329 0.20 +1.2
693,984 - MPMX19_04329 0.20 +1.0
693,984 - MPMX19_04329 0.20 +1.4
693,984 - MPMX19_04329 0.20 +0.5
693,984 - MPMX19_04329 0.20 -0.5
693,984 - MPMX19_04329 0.20 -0.2
693,984 - MPMX19_04329 0.20 +0.4
694,311 - MPMX19_04329 0.48 -0.8
694,311 - MPMX19_04329 0.48 +0.2
694,311 - MPMX19_04329 0.48 -1.8
694,311 - MPMX19_04329 0.48 -0.8
694,311 - MPMX19_04329 0.48 -0.5
694,311 - MPMX19_04329 0.48 -0.8
694,311 - MPMX19_04329 0.48 -1.3
694,311 - MPMX19_04329 0.48 -0.6
694,311 - MPMX19_04329 0.48 -0.8
694,311 - MPMX19_04329 0.48 +0.4
694,311 - MPMX19_04329 0.48 -1.1
694,311 - MPMX19_04329 0.48 +0.2
694,509 - MPMX19_04329 0.64 -0.2
694,509 - MPMX19_04329 0.64 +0.3
694,509 - MPMX19_04329 0.64 -0.2
694,509 - MPMX19_04329 0.64 -1.2
694,509 - MPMX19_04329 0.64 -1.8
694,509 - MPMX19_04329 0.64 -0.6
694,509 - MPMX19_04329 0.64 +0.1
694,509 - MPMX19_04329 0.64 -0.5

Or see this region's nucleotide sequence