Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04327

Experiment: NL-CCM, start OD=0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04326 and MPMX19_04327 are separated by 34 nucleotidesMPMX19_04327 and MPMX19_04328 overlap by 4 nucleotides MPMX19_04326: MPMX19_04326 - Beta-hexosaminidase, at 689,778 to 690,818 _04326 MPMX19_04327: MPMX19_04327 - hypothetical protein, at 690,853 to 691,923 _04327 MPMX19_04328: MPMX19_04328 - Arginine--tRNA ligase, at 691,920 to 693,680 _04328 Position (kb) 690 691 692Strain fitness (log2 ratio) -2 -1 0 1 2 3at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.465 kb on - strand, within MPMX19_04326at 690.846 kb on - strandat 690.846 kb on - strandat 690.846 kb on - strandat 690.846 kb on - strandat 690.846 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1
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690,465 - MPMX19_04326 0.66 +0.2
690,465 - MPMX19_04326 0.66 -1.6
690,465 - MPMX19_04326 0.66 -1.3
690,465 - MPMX19_04326 0.66 -1.3
690,465 - MPMX19_04326 0.66 -0.5
690,465 - MPMX19_04326 0.66 -1.3
690,465 - MPMX19_04326 0.66 -1.0
690,465 - MPMX19_04326 0.66 +1.5
690,465 - MPMX19_04326 0.66 +0.2
690,465 - MPMX19_04326 0.66 -1.0
690,465 - MPMX19_04326 0.66 +1.0
690,465 - MPMX19_04326 0.66 -0.8
690,465 - MPMX19_04326 0.66 +0.4
690,465 - MPMX19_04326 0.66 -0.2
690,465 - MPMX19_04326 0.66 +2.8
690,465 - MPMX19_04326 0.66 +0.7
690,465 - MPMX19_04326 0.66 -0.9
690,846 - -2.3
690,846 - -2.0
690,846 - -1.0
690,846 - -0.4
690,846 - -0.8

Or see this region's nucleotide sequence