Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03798

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
32,473	+		MPMX19_03797	0.30	-0.2
32,473	+		MPMX19_03797	0.30	+0.3
32,473	+		MPMX19_03797	0.30	-1.2
32,473	+		MPMX19_03797	0.30	-1.2
32,473	+		MPMX19_03797	0.30	-0.6
32,473	+		MPMX19_03797	0.30	+0.4
32,473	+		MPMX19_03797	0.30	-0.0
32,474	-		MPMX19_03797	0.30	-0.7
32,474	-		MPMX19_03797	0.30	-0.5
32,474	-		MPMX19_03797	0.30	+0.0
32,474	-		MPMX19_03797	0.30	+1.3
32,474	-		MPMX19_03797	0.30	-1.4
32,761	+		MPMX19_03797	0.53	-0.5
32,761	+		MPMX19_03797	0.53	-1.5
32,761	+		MPMX19_03797	0.53	-0.7
32,761	+		MPMX19_03797	0.53	-0.6
32,762	-		MPMX19_03797	0.53	-0.5
32,762	-		MPMX19_03797	0.53	+0.3
32,762	-		MPMX19_03797	0.53	-0.5
32,762	-		MPMX19_03797	0.53	+0.3
32,783	+		MPMX19_03797	0.55	-0.5
32,827	+		MPMX19_03797	0.58	-1.0
32,827	+		MPMX19_03797	0.58	-0.7
32,827	+		MPMX19_03797	0.58	+0.6
32,827	+		MPMX19_03797	0.58	-1.9
32,827	+		MPMX19_03797	0.58	-0.7
32,827	+		MPMX19_03797	0.58	-0.0
32,827	+		MPMX19_03797	0.58	-1.5
32,828	-		MPMX19_03797	0.59	+0.8
32,828	-		MPMX19_03797	0.59	-1.1
32,828	-		MPMX19_03797	0.59	-0.5
32,828	-		MPMX19_03797	0.59	+0.1
32,828	-		MPMX19_03797	0.59	-0.2
32,828	-		MPMX19_03797	0.59	-0.7
32,828	-		MPMX19_03797	0.59	+1.3
32,828	-		MPMX19_03797	0.59	-1.0
32,864	+		MPMX19_03797	0.61	-1.2
32,864	+		MPMX19_03797	0.61	-0.5
32,864	+		MPMX19_03797	0.61	+0.3
32,865	-		MPMX19_03797	0.62	-0.5
32,932	+		MPMX19_03797	0.67	+0.3
32,932	+		MPMX19_03797	0.67	-1.3
32,932	+		MPMX19_03797	0.67	-0.5
32,932	+		MPMX19_03797	0.67	-1.1
32,932	+		MPMX19_03797	0.67	-0.1
32,932	+		MPMX19_03797	0.67	-0.8
32,932	+		MPMX19_03797	0.67	+1.3
32,932	+		MPMX19_03797	0.67	-0.9
32,933	-		MPMX19_03797	0.67	+1.3
32,933	-		MPMX19_03797	0.67	-1.6
32,933	-		MPMX19_03797	0.67	-0.3
32,933	-		MPMX19_03797	0.67	+0.3
32,933	-		MPMX19_03797	0.67	-0.9
32,933	-		MPMX19_03797	0.67	-1.4
33,003	+		MPMX19_03797	0.73	+0.5
33,003	+		MPMX19_03797	0.73	-0.4
33,004	-		MPMX19_03797	0.73	-1.5
33,011	+		MPMX19_03797	0.73	+0.7
33,082	+		MPMX19_03797	0.79	-0.5
33,082	+		MPMX19_03797	0.79	+0.4
33,083	-		MPMX19_03797	0.79	-1.6
33,083	-		MPMX19_03797	0.79	-0.9
33,175	+		MPMX19_03797	0.87	-0.0
33,175	+		MPMX19_03797	0.87	+0.3
33,175	+		MPMX19_03797	0.87	+0.1
33,176	-		MPMX19_03797	0.87	+0.0
33,176	-		MPMX19_03797	0.87	+0.3
33,176	-		MPMX19_03797	0.87	-1.4
33,214	+				-1.7
33,214	+				-0.3
33,214	+				-0.8
33,214	+				+0.3
33,214	+				+1.5
33,214	+				+1.0
33,215	-				+0.8
33,215	-				-0.2
33,215	-				+1.8
33,284	-				-1.3
33,284	-				-0.5
33,334	+				-0.0
33,418	-				-0.2
33,419	+				-0.5
33,612	-		MPMX19_03798	0.17	-1.3
33,630	-		MPMX19_03798	0.19	-0.2
33,716	+		MPMX19_03798	0.29	-0.2
33,717	-		MPMX19_03798	0.29	+0.3
33,792	+		MPMX19_03798	0.37	+1.3
33,792	+		MPMX19_03798	0.37	+0.0
33,795	-		MPMX19_03798	0.38	-0.5
33,795	-		MPMX19_03798	0.38	-0.6
33,804	+		MPMX19_03798	0.39	-1.1
33,805	-		MPMX19_03798	0.39	-0.3
33,807	-		MPMX19_03798	0.39	-0.7
33,826	+		MPMX19_03798	0.41	-1.6
33,983	+		MPMX19_03798	0.59	-1.3
34,347	+				-0.7
34,404	+				-0.4
34,412	+				-1.0
34,413	-				+0.4
34,414	+				-0.2
34,414	+				-0.9
34,414	+				+1.3
34,414	+				-0.5
34,414	+				-0.6
34,414	+				+0.8
34,414	+				-2.6
34,414	+				-2.1
34,415	-				+1.8
34,415	-				+0.5
34,569	+				+0.0
34,570	-				-1.1
34,570	-				+0.8
34,651	+				-0.3
34,652	-				-0.3
34,652	-				-0.0
34,652	-				-1.3
34,652	-				-0.0
34,654	-				+1.3
34,654	-				-0.7
34,654	-				-0.6
34,654	-				+0.6
34,685	+				-0.7
34,847	+		MPMX19_03799	0.10	-0.4
34,847	+		MPMX19_03799	0.10	-0.7
34,847	+		MPMX19_03799	0.10	-0.6
34,847	+		MPMX19_03799	0.10	-0.7
34,847	+		MPMX19_03799	0.10	-0.2
34,847	+		MPMX19_03799	0.10	-0.7
34,847	+		MPMX19_03799	0.10	-1.1
34,847	+		MPMX19_03799	0.10	-0.1
34,847	+		MPMX19_03799	0.10	-0.9
34,848	-		MPMX19_03799	0.11	+0.6
34,848	-		MPMX19_03799	0.11	-1.1
34,848	-		MPMX19_03799	0.11	-1.2
34,848	-		MPMX19_03799	0.11	-0.4
34,848	-		MPMX19_03799	0.11	+0.5
34,848	-		MPMX19_03799	0.11	+0.8
34,848	-		MPMX19_03799	0.11	+1.3
34,848	-		MPMX19_03799	0.11	+0.3
34,848	-		MPMX19_03799	0.11	+0.6
34,848	-		MPMX19_03799	0.11	-1.2
34,848	-		MPMX19_03799	0.11	+0.3
34,848	-		MPMX19_03799	0.11	+0.1
34,848	-		MPMX19_03799	0.11	-0.7
34,848	-		MPMX19_03799	0.11	-1.3
34,848	-		MPMX19_03799	0.11	-1.3
34,848	-		MPMX19_03799	0.11	+0.2
34,848	-		MPMX19_03799	0.11	-0.4
34,848	-		MPMX19_03799	0.11	+2.6
34,848	-		MPMX19_03799	0.11	-0.9
34,848	-		MPMX19_03799	0.11	-0.9
34,849	-		MPMX19_03799	0.11	+0.5
34,910	+		MPMX19_03799	0.16	-1.3
34,910	+		MPMX19_03799	0.16	-0.1
34,910	+		MPMX19_03799	0.16	-0.6
34,910	+		MPMX19_03799	0.16	-1.7
34,910	+		MPMX19_03799	0.16	-1.9
34,910	+		MPMX19_03799	0.16	-0.6
34,910	+		MPMX19_03799	0.16	+0.1
34,911	-		MPMX19_03799	0.16	-0.4
34,911	-		MPMX19_03799	0.16	-2.9
34,911	-		MPMX19_03799	0.16	+0.3
35,075	+		MPMX19_03799	0.30	-1.1
35,075	+		MPMX19_03799	0.30	-1.2
35,075	+		MPMX19_03799	0.30	-0.3
35,075	+		MPMX19_03799	0.30	+0.0
35,075	+		MPMX19_03799	0.30	-0.4
35,075	+		MPMX19_03799	0.30	-0.9
35,075	+		MPMX19_03799	0.30	-2.0
35,075	+		MPMX19_03799	0.30	-0.4
35,075	+		MPMX19_03799	0.30	-0.3
35,075	+		MPMX19_03799	0.30	-1.8
35,076	-		MPMX19_03799	0.31	+0.0
35,076	-		MPMX19_03799	0.31	-3.0
35,076	-		MPMX19_03799	0.31	+0.6
35,076	-		MPMX19_03799	0.31	+1.5
35,076	-		MPMX19_03799	0.31	+0.9
35,076	-		MPMX19_03799	0.31	+1.8
35,076	-		MPMX19_03799	0.31	-0.2
35,076	-		MPMX19_03799	0.31	-1.6
35,076	-		MPMX19_03799	0.31	+1.2
35,246	+		MPMX19_03799	0.45	-0.3
35,246	+		MPMX19_03799	0.45	+1.1
35,246	+		MPMX19_03799	0.45	+0.1
35,247	-		MPMX19_03799	0.45	+0.3
35,247	-		MPMX19_03799	0.45	-0.6