Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03781

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
21,828	+		MPMX19_03780	0.36	-0.5
21,828	+		MPMX19_03780	0.36	-0.9
21,828	+		MPMX19_03780	0.36	-2.9
21,828	+		MPMX19_03780	0.36	+1.1
21,829	-		MPMX19_03780	0.37	-0.5
21,829	-		MPMX19_03780	0.37	-2.0
21,829	-		MPMX19_03780	0.37	-1.2
21,829	-		MPMX19_03780	0.37	+0.5
21,835	+		MPMX19_03780	0.37	-0.3
21,835	+		MPMX19_03780	0.37	-0.4
21,835	+		MPMX19_03780	0.37	+0.5
21,835	+		MPMX19_03780	0.37	+0.6
21,836	-		MPMX19_03780	0.37	-0.5
21,836	-		MPMX19_03780	0.37	-1.5
21,836	-		MPMX19_03780	0.37	-0.8
21,836	-		MPMX19_03780	0.37	-0.0
21,836	-		MPMX19_03780	0.37	-0.3
21,907	+		MPMX19_03780	0.45	+0.0
21,907	+		MPMX19_03780	0.45	-0.3
21,907	+		MPMX19_03780	0.45	-0.4
21,907	+		MPMX19_03780	0.45	+0.4
21,907	+		MPMX19_03780	0.45	-0.5
21,907	+		MPMX19_03780	0.45	-1.7
21,907	+		MPMX19_03780	0.45	-0.9
21,907	+		MPMX19_03780	0.45	+0.4
21,907	+		MPMX19_03780	0.45	-1.9
21,907	+		MPMX19_03780	0.45	-0.9
21,907	+		MPMX19_03780	0.45	-2.2
21,907	+		MPMX19_03780	0.45	+0.3
21,908	-		MPMX19_03780	0.45	-0.5
21,908	-		MPMX19_03780	0.45	-0.4
21,908	-		MPMX19_03780	0.45	-0.7
21,908	-		MPMX19_03780	0.45	-0.9
21,908	-		MPMX19_03780	0.45	-1.5
21,908	-		MPMX19_03780	0.45	-0.2
21,908	-		MPMX19_03780	0.45	+0.2
21,908	-		MPMX19_03780	0.45	-1.0
21,908	-		MPMX19_03780	0.45	-0.2
21,908	-		MPMX19_03780	0.45	-1.7
21,908	-		MPMX19_03780	0.45	-1.4
22,066	+		MPMX19_03780	0.62	+2.6
22,066	+		MPMX19_03780	0.62	-0.3
22,066	+		MPMX19_03780	0.62	-1.7
22,066	+		MPMX19_03780	0.62	+0.1
22,066	+		MPMX19_03780	0.62	-0.7
22,066	+		MPMX19_03780	0.62	-1.0
22,066	+		MPMX19_03780	0.62	-0.7
22,066	+		MPMX19_03780	0.62	+0.5
22,066	+		MPMX19_03780	0.62	+1.1
22,067	-		MPMX19_03780	0.62	+1.3
22,067	-		MPMX19_03780	0.62	-0.2
22,067	-		MPMX19_03780	0.62	-0.6
22,067	-		MPMX19_03780	0.62	-2.3
22,067	-		MPMX19_03780	0.62	-0.2
22,067	-		MPMX19_03780	0.62	-1.8
22,067	-		MPMX19_03780	0.62	+0.3
22,067	-		MPMX19_03780	0.62	-1.5
22,067	-		MPMX19_03780	0.62	-0.2
22,067	-		MPMX19_03780	0.62	+0.4
22,067	-		MPMX19_03780	0.62	-1.8
22,067	-		MPMX19_03780	0.62	-0.4
22,345	+				+0.8
22,345	+				+0.1
22,345	+				+1.6
22,345	+				-1.2
22,345	+				+0.2
22,345	+				-0.9
22,345	+				-0.2
22,345	+				+0.7
22,346	-				+0.1
22,346	-				-0.3
22,346	-				-2.0
22,346	-				+1.0
22,346	-				-1.1
22,346	-				-1.2
22,357	+				-0.9
22,381	+				-0.3
22,381	+				-1.0
22,381	+				-1.5
22,381	+				-1.2
22,381	+				+0.7
22,381	+				+0.3
22,381	+				-0.6
22,381	+				-0.3
22,381	+				-1.1
22,381	+				-0.2
22,381	+				-1.5
22,382	-				-0.1
22,382	-				-0.3
22,382	-				-0.6
22,382	-				-0.6
22,382	-				-1.6
22,382	-				-0.3
22,382	-				-0.4
22,382	-				-2.2
22,382	-				-1.0
22,382	-				-0.5
22,382	-				-2.2
22,382	-				+0.0
22,382	-				-1.0
22,382	-				+0.4
22,382	-				-1.9
22,382	-				-0.7
22,382	-				-0.6
22,382	-				+0.1
22,382	-				+0.8
22,382	-				+0.0
22,404	-				-1.2
22,404	-				+0.1
22,404	-				-0.5
22,464	+		MPMX19_03781	0.11	-0.2
22,464	+		MPMX19_03781	0.11	+0.7
22,464	+		MPMX19_03781	0.11	-0.8
22,464	+		MPMX19_03781	0.11	-0.6
22,465	-		MPMX19_03781	0.11	-0.7
22,465	-		MPMX19_03781	0.11	-1.6
22,465	-		MPMX19_03781	0.11	-1.0
22,465	-		MPMX19_03781	0.11	-0.1
22,465	-		MPMX19_03781	0.11	+0.1
22,465	-		MPMX19_03781	0.11	-0.5
22,465	-		MPMX19_03781	0.11	+0.3
22,465	-		MPMX19_03781	0.11	-0.5
22,465	-		MPMX19_03781	0.11	-1.2
22,465	-		MPMX19_03781	0.11	-0.2
22,465	-		MPMX19_03781	0.11	-1.7
22,465	-		MPMX19_03781	0.11	-1.7
22,465	-		MPMX19_03781	0.11	-0.4
22,465	-		MPMX19_03781	0.11	-0.5
22,465	-		MPMX19_03781	0.11	+0.3
22,465	-		MPMX19_03781	0.11	-1.0
22,468	+		MPMX19_03781	0.12	-0.3
22,468	+		MPMX19_03781	0.12	-0.6
22,468	+		MPMX19_03781	0.12	-0.4
22,468	+		MPMX19_03781	0.12	-0.7
22,468	+		MPMX19_03781	0.12	-0.1
22,468	+		MPMX19_03781	0.12	-1.7
22,468	+		MPMX19_03781	0.12	+0.1
22,468	+		MPMX19_03781	0.12	-0.7
22,468	+		MPMX19_03781	0.12	-0.4
22,468	+		MPMX19_03781	0.12	+0.0
22,469	-		MPMX19_03781	0.12	-0.9
22,469	-		MPMX19_03781	0.12	+0.2
22,469	-		MPMX19_03781	0.12	-0.0
22,469	-		MPMX19_03781	0.12	-0.8
22,469	-		MPMX19_03781	0.12	-2.4
22,469	-		MPMX19_03781	0.12	-0.4
22,469	-		MPMX19_03781	0.12	-0.8
22,469	-		MPMX19_03781	0.12	+0.3
22,469	-		MPMX19_03781	0.12	-1.7
22,469	-		MPMX19_03781	0.12	-1.7
22,469	-		MPMX19_03781	0.12	-2.6
22,469	-		MPMX19_03781	0.12	-0.2
22,557	+		MPMX19_03781	0.36	-1.9
22,557	+		MPMX19_03781	0.36	-0.5
22,558	-		MPMX19_03781	0.37	-0.7
22,558	-		MPMX19_03781	0.37	-1.3
22,558	-		MPMX19_03781	0.37	-0.0
22,558	-		MPMX19_03781	0.37	+0.5
22,575	+		MPMX19_03781	0.41	-1.0
22,576	-		MPMX19_03781	0.42	-0.7
22,576	-		MPMX19_03781	0.42	-1.2
22,576	-		MPMX19_03781	0.42	+0.3
22,794	+				+0.8
22,794	+				-1.5
22,794	+				-0.2
22,794	+				+0.6
22,795	-				-1.1
22,795	-				+0.0
22,795	-				+0.6
22,795	-				-1.3
22,795	-				-1.2
22,908	+		MPMX19_03782	0.35	-1.5
22,909	-		MPMX19_03782	0.36	+0.7
22,926	+		MPMX19_03782	0.40	-2.1
22,926	+		MPMX19_03782	0.40	-0.7
22,926	+		MPMX19_03782	0.40	-0.5
22,926	+		MPMX19_03782	0.40	+0.1
22,926	+		MPMX19_03782	0.40	-0.5
22,926	+		MPMX19_03782	0.40	-0.2
22,926	+		MPMX19_03782	0.40	-0.3
22,926	+		MPMX19_03782	0.40	-1.3
22,926	+		MPMX19_03782	0.40	-0.7
22,926	+		MPMX19_03782	0.40	-1.1
22,926	+		MPMX19_03782	0.40	+2.1
22,927	-		MPMX19_03782	0.41	-1.3
22,927	-		MPMX19_03782	0.41	-0.9
22,927	-		MPMX19_03782	0.41	+0.4
22,927	-		MPMX19_03782	0.41	+0.6
22,927	-		MPMX19_03782	0.41	+1.5
22,927	-		MPMX19_03782	0.41	-1.6
22,927	-		MPMX19_03782	0.41	-2.4
22,927	-		MPMX19_03782	0.41	-0.9
22,927	-		MPMX19_03782	0.41	+0.8
22,927	-		MPMX19_03782	0.41	+1.4
22,927	-		MPMX19_03782	0.41	-0.6
22,927	-		MPMX19_03782	0.41	+0.0
22,927	-		MPMX19_03782	0.41	-2.3
23,149	+				+0.3
23,149	+				+0.2
23,149	+				+0.3
23,149	+				-1.2
23,149	+				-1.5
23,149	+				+0.1
23,149	+				-0.3
23,149	+				+0.7
23,149	+				-0.3
23,149	+				-1.9
23,149	+				-0.4
23,149	+				+0.3
23,149	+				+0.5
23,149	+				+0.8
23,149	+				+1.8
23,150	-				-0.5
23,150	-				-1.1
23,150	-				-0.7
23,150	-				+0.7
23,150	-				-0.9
23,150	-				+0.3
23,150	-				-2.1
23,150	-				-0.6
23,150	-				-0.0
23,150	-				-1.2
23,150	-				+0.8
23,150	-				-0.3
23,150	-				+0.3
23,150	-				-0.2
23,150	-				+0.7
23,150	-				+0.3
23,150	-				-1.7
23,150	-				+1.0
23,474	+		MPMX19_03783	0.45	+0.3
23,475	-		MPMX19_03783	0.45	-2.2
23,475	-		MPMX19_03783	0.45	+0.0
23,522	+		MPMX19_03783	0.51	-1.2
23,522	+		MPMX19_03783	0.51	-0.3
23,522	+		MPMX19_03783	0.51	+0.3
23,522	+		MPMX19_03783	0.51	-0.2
23,522	+		MPMX19_03783	0.51	-1.0
23,522	+		MPMX19_03783	0.51	+1.0
23,522	+		MPMX19_03783	0.51	-0.5
23,523	-		MPMX19_03783	0.51	-0.7
23,523	-		MPMX19_03783	0.51	-0.0
23,523	-		MPMX19_03783	0.51	-2.1
23,523	-		MPMX19_03783	0.51	-1.0
23,523	-		MPMX19_03783	0.51	-1.7
23,523	-		MPMX19_03783	0.51	+0.8
23,523	-		MPMX19_03783	0.51	-0.9
23,523	-		MPMX19_03783	0.51	-1.2
23,523	-		MPMX19_03783	0.51	-1.0
23,523	-		MPMX19_03783	0.51	-0.2
23,523	-		MPMX19_03783	0.51	+0.3
23,669	+		MPMX19_03783	0.70	-0.7
23,669	+		MPMX19_03783	0.70	+0.3
23,669	+		MPMX19_03783	0.70	+0.7
23,669	+		MPMX19_03783	0.70	+0.1
23,669	+		MPMX19_03783	0.70	+0.2
23,669	+		MPMX19_03783	0.70	-0.3
23,669	+		MPMX19_03783	0.70	-0.1
23,669	+		MPMX19_03783	0.70	+0.6
23,669	+		MPMX19_03783	0.70	-0.4
23,670	-		MPMX19_03783	0.70	+0.3
23,670	-		MPMX19_03783	0.70	-0.6
23,670	-		MPMX19_03783	0.70	+0.5
23,670	-		MPMX19_03783	0.70	+0.1
23,670	-		MPMX19_03783	0.70	+1.6
23,684	+		MPMX19_03783	0.72	-1.6
23,684	+		MPMX19_03783	0.72	-0.3
23,684	+		MPMX19_03783	0.72	+0.4
23,684	+		MPMX19_03783	0.72	-2.1
23,684	+		MPMX19_03783	0.72	-1.8
23,684	+		MPMX19_03783	0.72	+0.5
23,684	+		MPMX19_03783	0.72	-0.5
23,684	+		MPMX19_03783	0.72	-0.4
23,684	+		MPMX19_03783	0.72	-1.5
23,685	-		MPMX19_03783	0.72	-1.1
23,685	-		MPMX19_03783	0.72	-0.2
23,685	-		MPMX19_03783	0.72	+0.2
23,685	-		MPMX19_03783	0.72	-2.2
23,685	-		MPMX19_03783	0.72	-0.1
23,685	-		MPMX19_03783	0.72	-2.1
23,685	-		MPMX19_03783	0.72	-0.6
23,685	-		MPMX19_03783	0.72	-0.5
23,685	-		MPMX19_03783	0.72	-0.5
23,731	+		MPMX19_03783	0.79	+0.1
23,744	+		MPMX19_03783	0.80	-1.1
23,745	-		MPMX19_03783	0.80	-0.2
23,745	-		MPMX19_03783	0.80	-0.5