Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03736

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,179,302	-		MPMX19_03734	0.85	-0.8
1,179,302	-		MPMX19_03734	0.85	-0.3
1,179,316	+		MPMX19_03734	0.88	-0.3
1,179,429	-				-0.3
1,179,491	+				-0.2
1,179,492	-				-1.5
1,179,664	+		MPMX19_03735	0.25	+0.8
1,179,664	+		MPMX19_03735	0.25	-0.9
1,179,665	-		MPMX19_03735	0.25	+0.2
1,179,665	-		MPMX19_03735	0.25	-1.7
1,179,665	-		MPMX19_03735	0.25	-1.3
1,179,802	+		MPMX19_03735	0.48	-2.1
1,179,802	+		MPMX19_03735	0.48	-0.8
1,179,802	+		MPMX19_03735	0.48	-1.3
1,179,802	+		MPMX19_03735	0.48	-2.1
1,179,803	-		MPMX19_03735	0.48	-0.8
1,179,803	-		MPMX19_03735	0.48	+1.4
1,179,803	-		MPMX19_03735	0.48	-1.4
1,179,803	-		MPMX19_03735	0.48	+0.4
1,179,803	-		MPMX19_03735	0.48	+2.4
1,179,809	-		MPMX19_03735	0.49	+0.7
1,180,184	-				-0.8
1,180,294	+		MPMX19_03736	0.29	-1.8
1,180,294	+		MPMX19_03736	0.29	-2.9
1,180,294	+		MPMX19_03736	0.29	-0.6
1,180,294	+		MPMX19_03736	0.29	-0.6
1,180,294	+		MPMX19_03736	0.29	-0.1
1,180,294	+		MPMX19_03736	0.29	-1.5
1,180,294	+		MPMX19_03736	0.29	-2.0
1,180,294	+		MPMX19_03736	0.29	-1.0
1,180,294	+		MPMX19_03736	0.29	+0.1
1,180,295	-		MPMX19_03736	0.29	+1.0
1,180,295	-		MPMX19_03736	0.29	-0.1
1,180,295	-		MPMX19_03736	0.29	-3.2
1,180,295	-		MPMX19_03736	0.29	-0.6
1,180,295	-		MPMX19_03736	0.29	+0.3
1,180,295	-		MPMX19_03736	0.29	-0.5
1,180,295	-		MPMX19_03736	0.29	-1.5
1,180,295	-		MPMX19_03736	0.29	-1.7
1,180,324	+		MPMX19_03736	0.37	+1.4
1,180,324	+		MPMX19_03736	0.37	-0.6
1,180,324	+		MPMX19_03736	0.37	-1.5
1,180,324	+		MPMX19_03736	0.37	+0.3
1,180,324	+		MPMX19_03736	0.37	+0.3
1,180,324	+		MPMX19_03736	0.37	-1.3
1,180,325	-		MPMX19_03736	0.37	-3.3
1,180,325	-		MPMX19_03736	0.37	+0.1
1,180,325	-		MPMX19_03736	0.37	-2.7
1,180,325	-		MPMX19_03736	0.37	-0.4
1,180,325	-		MPMX19_03736	0.37	+0.1
1,180,351	+		MPMX19_03736	0.44	-1.3
1,180,351	+		MPMX19_03736	0.44	-1.7
1,180,352	-		MPMX19_03736	0.44	-0.7
1,180,352	-		MPMX19_03736	0.44	-0.4
1,180,650	+				-0.6
1,180,650	+				-0.1
1,180,650	+				+0.1
1,180,650	+				+0.6
1,180,650	+				-2.3
1,180,650	+				+0.5
1,180,650	+				-0.1
1,180,650	+				-1.2
1,180,651	-				+0.5
1,180,651	-				-0.1
1,180,651	-				-0.3
1,180,683	-				-2.1
1,180,683	-				-1.5
1,180,711	+				-1.5
1,180,812	+				-1.5
1,180,812	+				-0.1
1,180,812	+				-1.3
1,180,812	+				+0.9
1,180,812	+				+0.6
1,180,812	+				-1.8
1,180,812	+				-0.3
1,180,812	+				+0.1
1,180,812	+				-0.7
1,180,812	+				-0.9
1,180,812	+				-2.0
1,180,812	+				+1.0
1,180,813	-				-1.6
1,180,813	-				-1.6
1,180,813	-				-0.0
1,180,813	-				+0.7
1,180,813	-				-2.1
1,180,813	-				-0.4
1,180,813	-				-1.9
1,180,813	-				+0.7
1,180,855	+				+0.5
1,180,855	+				+0.1
1,180,855	+				-1.0
1,180,855	+				-0.1
1,180,855	+				+0.4
1,180,856	-				-2.2
1,180,856	-				-0.5
1,180,856	-				-1.1
1,180,856	-				-0.4
1,181,174	+		MPMX19_03737	0.36	+0.4
1,181,174	+		MPMX19_03737	0.36	-0.9
1,181,174	+		MPMX19_03737	0.36	+0.1
1,181,174	+		MPMX19_03737	0.36	-0.7
1,181,175	-		MPMX19_03737	0.37	-2.3
1,181,175	-		MPMX19_03737	0.37	-2.1
1,181,295	-		MPMX19_03737	0.50	+1.1
1,181,381	+		MPMX19_03737	0.60	-0.3
1,181,381	+		MPMX19_03737	0.60	+0.1
1,181,381	+		MPMX19_03737	0.60	-1.7
1,181,381	+		MPMX19_03737	0.60	-2.4
1,181,382	-		MPMX19_03737	0.61	-1.3
1,181,382	-		MPMX19_03737	0.61	-0.8
1,181,382	-		MPMX19_03737	0.61	-1.2
1,181,396	+		MPMX19_03737	0.62	-1.3
1,181,396	+		MPMX19_03737	0.62	-0.8
1,181,396	+		MPMX19_03737	0.62	+0.9
1,181,396	+		MPMX19_03737	0.62	-0.6
1,181,397	-		MPMX19_03737	0.62	+0.1
1,181,397	-		MPMX19_03737	0.62	-0.3
1,181,397	-		MPMX19_03737	0.62	+0.4
1,181,397	-		MPMX19_03737	0.62	-1.0
1,181,397	-		MPMX19_03737	0.62	-0.3
1,181,397	-		MPMX19_03737	0.62	-0.7
1,181,504	+		MPMX19_03737	0.75	-2.4
1,181,504	+		MPMX19_03737	0.75	+1.1
1,181,504	+		MPMX19_03737	0.75	-0.1
1,181,504	+		MPMX19_03737	0.75	-3.7
1,181,505	-		MPMX19_03737	0.75	-0.9
1,181,505	-		MPMX19_03737	0.75	-1.1
1,181,505	-		MPMX19_03737	0.75	-0.6
1,181,505	-		MPMX19_03737	0.75	+0.1
1,181,505	-		MPMX19_03737	0.75	-1.4
1,181,505	-		MPMX19_03737	0.75	-2.1
1,181,505	-		MPMX19_03737	0.75	+0.9
1,181,505	-		MPMX19_03737	0.75	-0.3