Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03728

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,173,428	+		MPMX19_03727	0.27	-0.6
1,173,428	+		MPMX19_03727	0.27	-0.1
1,173,428	+		MPMX19_03727	0.27	-2.1
1,173,428	+		MPMX19_03727	0.27	-1.1
1,173,429	-		MPMX19_03727	0.28	-0.4
1,173,434	+		MPMX19_03727	0.28	+1.1
1,173,434	+		MPMX19_03727	0.28	-1.4
1,173,435	-		MPMX19_03727	0.28	+0.1
1,173,435	-		MPMX19_03727	0.28	-0.9
1,173,601	+		MPMX19_03727	0.43	-1.6
1,173,601	+		MPMX19_03727	0.43	+0.5
1,173,601	+		MPMX19_03727	0.43	+0.2
1,173,601	+		MPMX19_03727	0.43	+0.9
1,173,601	+		MPMX19_03727	0.43	-1.2
1,173,602	-		MPMX19_03727	0.43	-1.0
1,173,602	-		MPMX19_03727	0.43	-0.3
1,173,602	-		MPMX19_03727	0.43	+0.5
1,173,924	+		MPMX19_03727	0.72	+0.1
1,173,924	+		MPMX19_03727	0.72	-0.5
1,173,925	-		MPMX19_03727	0.72	-0.4
1,173,925	-		MPMX19_03727	0.72	+0.9
1,173,925	-		MPMX19_03727	0.72	-0.6
1,173,925	-		MPMX19_03727	0.72	+0.4
1,174,023	-		MPMX19_03727	0.81	-2.7
1,174,023	-		MPMX19_03727	0.81	-0.3
1,174,023	-		MPMX19_03727	0.81	-0.9
1,174,130	+				-0.0
1,174,130	+				-1.1
1,174,130	+				-0.2
1,174,130	+				+1.1
1,174,130	+				+0.1
1,174,130	+				+0.7
1,174,130	+				-0.3
1,174,130	+				+0.1
1,174,130	+				-0.1
1,174,131	-				-1.0
1,174,131	-				-0.3
1,174,131	-				-0.3
1,174,221	+				-0.5
1,174,221	+				-0.7
1,174,221	+				-0.6
1,174,222	-				-0.8
1,174,222	-				-0.3
1,174,597	+		MPMX19_03728	0.87	-1.9
1,174,597	+		MPMX19_03728	0.87	+0.2
1,174,597	+		MPMX19_03728	0.87	-0.9
1,174,597	+		MPMX19_03728	0.87	+0.1
1,174,597	+		MPMX19_03728	0.87	-0.9
1,174,598	-		MPMX19_03728	0.88	-1.8
1,174,714	+				-1.5
1,174,715	-				+0.4
1,174,715	-				+1.2
1,174,798	+		MPMX19_03729	0.15	-1.3
1,174,798	+		MPMX19_03729	0.15	+1.1
1,174,798	+		MPMX19_03729	0.15	+0.6
1,174,799	-		MPMX19_03729	0.15	-0.3
1,174,799	-		MPMX19_03729	0.15	-1.5
1,174,799	-		MPMX19_03729	0.15	-0.4
1,174,799	-		MPMX19_03729	0.15	-2.2
1,174,933	+		MPMX19_03729	0.32	-0.6
1,174,933	+		MPMX19_03729	0.32	+0.5
1,174,933	+		MPMX19_03729	0.32	-1.5
1,174,933	+		MPMX19_03729	0.32	-0.5
1,174,933	+		MPMX19_03729	0.32	-1.1
1,174,933	+		MPMX19_03729	0.32	-2.1
1,174,933	+		MPMX19_03729	0.32	-0.4
1,174,934	-		MPMX19_03729	0.32	+0.0
1,174,934	-		MPMX19_03729	0.32	-0.4
1,174,934	-		MPMX19_03729	0.32	-0.9
1,174,934	-		MPMX19_03729	0.32	+0.1
1,174,934	-		MPMX19_03729	0.32	-2.3
1,174,934	-		MPMX19_03729	0.32	-0.4
1,174,934	-		MPMX19_03729	0.32	+0.4
1,174,934	-		MPMX19_03729	0.32	-0.0
1,175,218	+		MPMX19_03729	0.66	-1.5
1,175,218	+		MPMX19_03729	0.66	-1.0
1,175,219	-		MPMX19_03729	0.66	-0.6
1,175,453	+				-2.8
1,175,453	+				-0.7
1,175,453	+				-0.1
1,175,454	-				-1.5
1,175,454	-				-1.0
1,175,454	-				-2.2
1,175,454	-				-0.5
1,175,454	-				-0.3
1,175,465	+				-0.1
1,175,465	+				+0.1
1,175,466	-				-1.3
1,175,466	-				-0.5
1,175,546	+				-0.4
1,175,546	+				-0.6
1,175,547	-				+0.2
1,175,547	-				-1.5
1,175,619	+				+0.4
1,175,619	+				-1.5
1,175,619	+				+0.3
1,175,619	+				+1.2
1,175,619	+				-1.0
1,175,620	-				+0.4
1,175,620	-				-0.1
1,175,620	-				+1.7
1,175,620	-				+1.1
1,175,620	-				+0.8