Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03726

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,170,248	+		MPMX19_03725	0.76	-0.3
1,170,248	+		MPMX19_03725	0.76	-0.9
1,170,248	+		MPMX19_03725	0.76	-0.2
1,170,249	-		MPMX19_03725	0.76	-0.8
1,170,249	-		MPMX19_03725	0.76	-0.5
1,170,484	+		MPMX19_03725	0.84	-0.6
1,170,484	+		MPMX19_03725	0.84	-0.3
1,170,484	+		MPMX19_03725	0.84	-0.1
1,170,484	+		MPMX19_03725	0.84	-0.7
1,170,484	+		MPMX19_03725	0.84	+0.4
1,170,485	-		MPMX19_03725	0.84	+0.0
1,170,485	-		MPMX19_03725	0.84	-2.9
1,170,485	-		MPMX19_03725	0.84	-0.5
1,170,485	-		MPMX19_03725	0.84	+0.5
1,170,485	-		MPMX19_03725	0.84	-0.4
1,170,532	+		MPMX19_03725	0.86	+0.4
1,170,532	+		MPMX19_03725	0.86	+0.1
1,170,532	+		MPMX19_03725	0.86	-0.8
1,170,532	+		MPMX19_03725	0.86	+0.7
1,170,532	+		MPMX19_03725	0.86	-0.5
1,170,533	-		MPMX19_03725	0.86	-0.6
1,170,533	-		MPMX19_03725	0.86	-1.8
1,170,533	-		MPMX19_03725	0.86	-2.1
1,170,533	-		MPMX19_03725	0.86	+0.6
1,170,533	-		MPMX19_03725	0.86	+0.1
1,170,533	-		MPMX19_03725	0.86	-0.0
1,170,533	-		MPMX19_03725	0.86	+1.3
1,170,568	+		MPMX19_03725	0.87	+0.6
1,170,569	-		MPMX19_03725	0.87	-0.6
1,170,569	-		MPMX19_03725	0.87	-1.6
1,170,569	-		MPMX19_03725	0.87	-0.5
1,170,569	-		MPMX19_03725	0.87	-0.1
1,170,569	-		MPMX19_03725	0.87	-0.3
1,170,569	-		MPMX19_03725	0.87	-1.6
1,170,652	+				-0.9
1,170,652	+				-0.3
1,170,652	+				-0.6
1,170,653	-				+0.3
1,170,746	-				-0.6
1,170,993	+				-1.5
1,170,993	+				-1.1
1,170,993	+				-2.0
1,170,993	+				-0.7
1,170,994	-				-2.3
1,170,994	-				-0.6
1,170,994	-				-0.6
1,171,086	+				-0.3
1,171,086	+				+0.3
1,171,086	+				-2.2
1,171,086	+				-2.9
1,171,086	+				+1.4
1,171,086	+				-3.1
1,171,086	+				-0.1
1,171,087	-				-0.2
1,171,087	-				-0.2
1,171,087	-				-1.0
1,171,087	-				-0.5
1,171,087	-				-2.0
1,171,087	-				-1.8
1,171,087	-				-0.8
1,171,087	-				-0.7
1,171,087	-				-2.1
1,171,164	-				+0.1
1,171,164	-				-0.6
1,171,182	+				-1.8
1,171,182	+				+0.5
1,171,183	-				-0.6
1,171,405	+		MPMX19_03726	0.11	+0.3
1,171,405	+		MPMX19_03726	0.11	-0.4
1,171,406	-		MPMX19_03726	0.11	+0.1
1,171,406	-		MPMX19_03726	0.11	-0.5
1,171,406	-		MPMX19_03726	0.11	-2.8
1,171,406	-		MPMX19_03726	0.11	+0.7
1,171,453	+		MPMX19_03726	0.13	+0.3
1,171,454	-		MPMX19_03726	0.14	+0.4
1,171,454	-		MPMX19_03726	0.14	+1.3
1,171,741	+		MPMX19_03726	0.28	-0.9
1,171,741	+		MPMX19_03726	0.28	+0.1
1,171,741	+		MPMX19_03726	0.28	+0.1
1,171,741	+		MPMX19_03726	0.28	+0.3
1,171,742	-		MPMX19_03726	0.29	-0.2
1,171,742	-		MPMX19_03726	0.29	+1.4
1,171,742	-		MPMX19_03726	0.29	-1.0
1,171,742	-		MPMX19_03726	0.29	-0.8
1,172,383	+		MPMX19_03726	0.62	-2.3
1,172,383	+		MPMX19_03726	0.62	-0.5
1,172,383	+		MPMX19_03726	0.62	-1.3
1,172,383	+		MPMX19_03726	0.62	-0.7
1,172,383	+		MPMX19_03726	0.62	-0.1
1,172,383	+		MPMX19_03726	0.62	-0.4
1,172,384	-		MPMX19_03726	0.62	-0.8
1,172,384	-		MPMX19_03726	0.62	-0.6
1,172,853	+		MPMX19_03726	0.86	+0.5
1,172,853	+		MPMX19_03726	0.86	-0.3
1,172,853	+		MPMX19_03726	0.86	-1.6
1,172,853	+		MPMX19_03726	0.86	-1.3
1,172,854	-		MPMX19_03726	0.86	+0.1
1,173,428	+		MPMX19_03727	0.27	-0.6
1,173,428	+		MPMX19_03727	0.27	-0.1
1,173,428	+		MPMX19_03727	0.27	-2.1
1,173,428	+		MPMX19_03727	0.27	-1.1
1,173,429	-		MPMX19_03727	0.28	-0.4
1,173,434	+		MPMX19_03727	0.28	+1.1
1,173,434	+		MPMX19_03727	0.28	-1.4
1,173,435	-		MPMX19_03727	0.28	+0.1
1,173,435	-		MPMX19_03727	0.28	-0.9
1,173,601	+		MPMX19_03727	0.43	-1.6
1,173,601	+		MPMX19_03727	0.43	+0.5
1,173,601	+		MPMX19_03727	0.43	+0.2
1,173,601	+		MPMX19_03727	0.43	+0.9
1,173,601	+		MPMX19_03727	0.43	-1.2
1,173,602	-		MPMX19_03727	0.43	-1.0
1,173,602	-		MPMX19_03727	0.43	-0.3
1,173,602	-		MPMX19_03727	0.43	+0.5
1,173,924	+		MPMX19_03727	0.72	+0.1
1,173,924	+		MPMX19_03727	0.72	-0.5
1,173,925	-		MPMX19_03727	0.72	-0.4
1,173,925	-		MPMX19_03727	0.72	+0.9
1,173,925	-		MPMX19_03727	0.72	-0.6
1,173,925	-		MPMX19_03727	0.72	+0.4
1,174,023	-		MPMX19_03727	0.81	-2.7
1,174,023	-		MPMX19_03727	0.81	-0.3
1,174,023	-		MPMX19_03727	0.81	-0.9