Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03714

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,154,750	+		MPMX19_03713	0.74	-1.2
1,154,750	+		MPMX19_03713	0.74	-0.0
1,154,750	+		MPMX19_03713	0.74	+0.3
1,154,751	-		MPMX19_03713	0.74	+0.1
1,154,859	+		MPMX19_03713	0.82	-0.4
1,154,859	+		MPMX19_03713	0.82	+0.5
1,154,860	-		MPMX19_03713	0.82	-0.1
1,154,860	-		MPMX19_03713	0.82	-0.1
1,154,860	-		MPMX19_03713	0.82	+0.5
1,154,871	+		MPMX19_03713	0.83	-2.3
1,154,871	+		MPMX19_03713	0.83	-0.5
1,154,871	+		MPMX19_03713	0.83	-0.3
1,154,871	+		MPMX19_03713	0.83	-1.2
1,154,871	+		MPMX19_03713	0.83	-1.3
1,154,871	+		MPMX19_03713	0.83	-1.3
1,154,871	+		MPMX19_03713	0.83	+0.9
1,154,871	+		MPMX19_03713	0.83	+0.1
1,154,871	+		MPMX19_03713	0.83	+0.3
1,154,871	+		MPMX19_03713	0.83	-0.8
1,154,871	+		MPMX19_03713	0.83	-0.9
1,154,872	-		MPMX19_03713	0.83	-0.8
1,154,872	-		MPMX19_03713	0.83	+0.7
1,154,872	-		MPMX19_03713	0.83	-0.9
1,154,872	-		MPMX19_03713	0.83	-1.5
1,154,872	-		MPMX19_03713	0.83	-1.3
1,154,872	-		MPMX19_03713	0.83	+0.3
1,154,872	-		MPMX19_03713	0.83	-1.1
1,155,102	+				-0.8
1,155,102	+				-1.2
1,155,103	-				-0.1
1,155,103	-				+2.3
1,155,141	+				+0.1
1,155,141	+				-0.9
1,155,141	+				-0.4
1,155,141	+				-1.0
1,155,141	+				-0.3
1,155,141	+				-1.1
1,155,141	+				+0.0
1,155,141	+				-0.3
1,155,142	-				+0.2
1,155,142	-				-0.5
1,155,142	-				-0.8
1,155,142	-				-0.8
1,155,205	+				-1.3
1,155,205	+				+0.1
1,155,205	+				+1.7
1,155,257	+				-1.6
1,155,257	+				-0.4
1,155,258	-				-0.6
1,155,258	-				-1.2
1,155,651	+				-0.2
1,155,651	+				-0.5
1,155,764	+		MPMX19_03714	0.11	-0.0
1,156,014	+		MPMX19_03714	0.18	-1.3
1,156,014	+		MPMX19_03714	0.18	+0.8
1,156,015	-		MPMX19_03714	0.18	-0.3
1,156,020	+		MPMX19_03714	0.18	-0.8
1,156,020	+		MPMX19_03714	0.18	-0.5
1,156,020	+		MPMX19_03714	0.18	-1.3
1,156,020	+		MPMX19_03714	0.18	-0.1
1,156,021	-		MPMX19_03714	0.18	+0.9
1,156,021	-		MPMX19_03714	0.18	+0.1
1,156,021	-		MPMX19_03714	0.18	-2.7
1,156,036	-		MPMX19_03714	0.19	+0.5
1,156,041	+		MPMX19_03714	0.19	-0.3
1,156,041	+		MPMX19_03714	0.19	-1.0
1,156,042	-		MPMX19_03714	0.19	+1.0
1,156,042	-		MPMX19_03714	0.19	+1.5
1,156,043	+		MPMX19_03714	0.19	-0.2
1,156,044	-		MPMX19_03714	0.19	-0.0
1,156,539	+		MPMX19_03714	0.32	-0.6
1,156,539	+		MPMX19_03714	0.32	+0.0
1,156,540	-		MPMX19_03714	0.32	-1.5
1,156,540	-		MPMX19_03714	0.32	-0.6
1,156,540	-		MPMX19_03714	0.32	-0.9
1,156,749	+		MPMX19_03714	0.38	-1.8
1,156,749	+		MPMX19_03714	0.38	-0.1
1,156,749	+		MPMX19_03714	0.38	-1.3
1,156,749	+		MPMX19_03714	0.38	+1.3
1,156,749	+		MPMX19_03714	0.38	-2.0
1,156,749	+		MPMX19_03714	0.38	-0.3
1,156,749	+		MPMX19_03714	0.38	-0.9
1,156,750	-		MPMX19_03714	0.38	-2.2
1,156,750	-		MPMX19_03714	0.38	-0.9
1,156,917	+		MPMX19_03714	0.42	+0.7
1,156,917	+		MPMX19_03714	0.42	+0.1
1,156,917	+		MPMX19_03714	0.42	+0.1
1,156,917	+		MPMX19_03714	0.42	-0.8
1,156,917	+		MPMX19_03714	0.42	+0.5
1,156,917	+		MPMX19_03714	0.42	+0.7
1,156,917	+		MPMX19_03714	0.42	-1.3
1,156,917	+		MPMX19_03714	0.42	+0.4
1,156,917	+		MPMX19_03714	0.42	-1.5
1,156,917	+		MPMX19_03714	0.42	+0.3
1,156,917	+		MPMX19_03714	0.42	-1.6
1,156,917	+		MPMX19_03714	0.42	+1.4
1,156,918	-		MPMX19_03714	0.42	+0.7
1,156,918	-		MPMX19_03714	0.42	-1.6
1,156,918	-		MPMX19_03714	0.42	-0.0
1,156,918	-		MPMX19_03714	0.42	+0.1
1,156,918	-		MPMX19_03714	0.42	-1.1
1,156,918	-		MPMX19_03714	0.42	+1.1
1,156,918	-		MPMX19_03714	0.42	+0.1
1,156,918	-		MPMX19_03714	0.42	-1.5
1,156,918	-		MPMX19_03714	0.42	+0.3
1,156,918	-		MPMX19_03714	0.42	-0.3
1,156,918	-		MPMX19_03714	0.42	+1.4
1,156,956	+		MPMX19_03714	0.43	-1.3
1,157,316	+		MPMX19_03714	0.53	+0.4
1,157,343	+		MPMX19_03714	0.53	-0.6
1,157,343	+		MPMX19_03714	0.53	-0.5
1,157,343	+		MPMX19_03714	0.53	-0.4
1,157,343	+		MPMX19_03714	0.53	-0.4
1,157,343	+		MPMX19_03714	0.53	+0.3
1,157,344	-		MPMX19_03714	0.53	+0.7
1,157,344	-		MPMX19_03714	0.53	-0.2
1,157,344	-		MPMX19_03714	0.53	+1.1
1,157,344	-		MPMX19_03714	0.53	-0.6
1,157,344	-		MPMX19_03714	0.53	-0.3
1,157,344	-		MPMX19_03714	0.53	-2.2
1,157,344	-		MPMX19_03714	0.53	+0.4
1,157,560	-		MPMX19_03714	0.59	-0.3
1,158,573	+		MPMX19_03714	0.86	-1.6
1,158,573	+		MPMX19_03714	0.86	-0.7
1,158,573	+		MPMX19_03714	0.86	-0.3
1,158,573	+		MPMX19_03714	0.86	-0.5
1,158,573	-		MPMX19_03714	0.86	-0.3
1,158,574	-		MPMX19_03714	0.86	-1.1
1,158,574	-		MPMX19_03714	0.86	-1.9
1,158,574	-		MPMX19_03714	0.86	+0.5
1,158,574	-		MPMX19_03714	0.86	-0.2
1,158,574	-		MPMX19_03714	0.86	+1.0
1,158,657	-		MPMX19_03714	0.88	+0.4
1,159,061	+				+0.5
1,159,061	+				+0.1
1,159,061	+				-1.2
1,159,062	-				+1.2
1,159,062	-				-0.5
1,159,094	+				+0.7
1,159,094	+				-0.8
1,159,094	+				-1.6
1,159,095	-				-0.6
1,159,095	-				-0.8
1,159,095	-				+0.1
1,159,095	-				-0.3
1,159,104	+				-0.9
1,159,104	+				-0.3
1,159,104	+				-0.8
1,159,104	+				+0.3
1,159,104	+				+0.2
1,159,105	-				-1.6
1,159,105	-				-1.9
1,159,105	-				-0.3
1,159,105	-				+0.2
1,159,105	-				-0.8
1,159,105	-				+1.0
1,159,399	+		MPMX19_03715	0.78	+0.2
1,159,399	+		MPMX19_03715	0.78	+1.4
1,159,399	+		MPMX19_03715	0.78	-1.4
1,159,399	+		MPMX19_03715	0.78	-1.3
1,159,399	+		MPMX19_03715	0.78	-0.2
1,159,399	+		MPMX19_03715	0.78	-1.6
1,159,399	+		MPMX19_03715	0.78	+0.9
1,159,400	-		MPMX19_03715	0.78	+0.4
1,159,400	-		MPMX19_03715	0.78	-0.2
1,159,400	-		MPMX19_03715	0.78	-0.6
1,159,400	-		MPMX19_03715	0.78	+0.8
1,159,400	-		MPMX19_03715	0.78	-0.3
1,159,400	-		MPMX19_03715	0.78	+0.1
1,159,483	+				+1.1
1,159,931	+		MPMX19_03716	0.76	+0.1
1,159,931	+		MPMX19_03716	0.76	+0.1
1,159,982	+		MPMX19_03716	0.85	+0.1
1,159,982	+		MPMX19_03716	0.85	-2.5
1,159,982	+		MPMX19_03716	0.85	+1.0
1,159,982	+		MPMX19_03716	0.85	+0.7
1,159,982	+		MPMX19_03716	0.85	-0.3
1,159,983	-		MPMX19_03716	0.86	-0.3
1,159,983	-		MPMX19_03716	0.86	-1.4
1,159,983	-		MPMX19_03716	0.86	-2.3
1,159,983	-		MPMX19_03716	0.86	-0.9
1,159,991	+		MPMX19_03716	0.87	-0.4
1,159,991	+		MPMX19_03716	0.87	-0.9
1,159,991	+		MPMX19_03716	0.87	+0.7
1,159,992	-		MPMX19_03716	0.87	+0.4
1,159,992	-		MPMX19_03716	0.87	+1.5
1,159,992	-		MPMX19_03716	0.87	-1.1
1,160,064	-				+0.2