Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03659

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,095,801	+		MPMX19_03657	0.62	+0.3
1,095,801	+		MPMX19_03657	0.62	-0.6
1,095,801	+		MPMX19_03657	0.62	+0.5
1,095,801	+		MPMX19_03657	0.62	+0.9
1,095,801	+		MPMX19_03657	0.62	-0.3
1,095,801	+		MPMX19_03657	0.62	+0.6
1,095,801	+		MPMX19_03657	0.62	-0.5
1,095,801	+		MPMX19_03657	0.62	-1.3
1,095,801	+		MPMX19_03657	0.62	-2.6
1,095,801	+		MPMX19_03657	0.62	+0.1
1,095,801	+		MPMX19_03657	0.62	+0.1
1,095,801	+		MPMX19_03657	0.62	-1.6
1,095,801	+		MPMX19_03657	0.62	-0.5
1,095,801	+		MPMX19_03657	0.62	+0.3
1,095,801	+		MPMX19_03657	0.62	+1.3
1,095,802	-		MPMX19_03657	0.63	+1.0
1,095,802	-		MPMX19_03657	0.63	-1.5
1,095,802	-		MPMX19_03657	0.63	-0.0
1,095,802	-		MPMX19_03657	0.63	-1.5
1,095,802	-		MPMX19_03657	0.63	-2.1
1,095,802	-		MPMX19_03657	0.63	+0.4
1,095,802	-		MPMX19_03657	0.63	-0.8
1,095,802	-		MPMX19_03657	0.63	+1.7
1,096,311	+				-0.2
1,096,311	+				+0.6
1,096,311	+				+1.7
1,096,312	-				-0.9
1,096,312	-				+0.7
1,096,844	+		MPMX19_03659	0.20	+0.3
1,096,844	+		MPMX19_03659	0.20	-0.0
1,096,844	+		MPMX19_03659	0.20	+0.1
1,096,844	+		MPMX19_03659	0.20	-0.1
1,096,845	-		MPMX19_03659	0.20	-0.1
1,096,845	-		MPMX19_03659	0.20	-0.1
1,096,943	+		MPMX19_03659	0.30	+1.0
1,096,943	+		MPMX19_03659	0.30	+0.3
1,096,943	+		MPMX19_03659	0.30	+1.7
1,096,944	-		MPMX19_03659	0.30	+1.1
1,096,944	-		MPMX19_03659	0.30	-0.6
1,096,944	-		MPMX19_03659	0.30	+1.3
1,096,944	-		MPMX19_03659	0.30	+0.2
1,096,944	-		MPMX19_03659	0.30	+0.1
1,096,944	-		MPMX19_03659	0.30	-0.9
1,096,944	-		MPMX19_03659	0.30	-0.7
1,097,086	+		MPMX19_03659	0.45	+0.4
1,097,087	-		MPMX19_03659	0.45	-0.8
1,097,156	+		MPMX19_03659	0.52	-1.6
1,097,156	+		MPMX19_03659	0.52	-1.0
1,097,156	+		MPMX19_03659	0.52	+1.1
1,097,156	+		MPMX19_03659	0.52	-0.5
1,097,156	+		MPMX19_03659	0.52	-0.6
1,097,156	+		MPMX19_03659	0.52	-0.3
1,097,156	+		MPMX19_03659	0.52	-0.3
1,097,156	+		MPMX19_03659	0.52	+1.3
1,097,156	+		MPMX19_03659	0.52	-0.0
1,097,156	+		MPMX19_03659	0.52	+1.1
1,097,157	-		MPMX19_03659	0.52	-0.2
1,097,157	-		MPMX19_03659	0.52	+1.4
1,097,157	-		MPMX19_03659	0.52	-0.2
1,097,157	-		MPMX19_03659	0.52	-1.5
1,097,157	-		MPMX19_03659	0.52	-1.0
1,097,157	-		MPMX19_03659	0.52	-1.1
1,097,157	-		MPMX19_03659	0.52	+1.3
1,097,157	-		MPMX19_03659	0.52	-1.3
1,097,223	-		MPMX19_03659	0.59	-0.3
1,097,429	+		MPMX19_03659	0.80	-1.4
1,097,429	+		MPMX19_03659	0.80	-1.1
1,097,429	+		MPMX19_03659	0.80	-0.1
1,097,429	+		MPMX19_03659	0.80	+1.2
1,097,429	+		MPMX19_03659	0.80	-0.6
1,097,429	+		MPMX19_03659	0.80	-0.8
1,097,429	+		MPMX19_03659	0.80	-0.7
1,097,429	+		MPMX19_03659	0.80	+0.7
1,097,430	-		MPMX19_03659	0.80	+0.5
1,097,430	-		MPMX19_03659	0.80	-0.9
1,097,430	-		MPMX19_03659	0.80	-1.2
1,097,430	-		MPMX19_03659	0.80	-0.2
1,097,430	-		MPMX19_03659	0.80	-1.9
1,097,430	-		MPMX19_03659	0.80	-0.0
1,097,430	-		MPMX19_03659	0.80	+0.8
1,097,430	-		MPMX19_03659	0.80	-0.7
1,097,430	-		MPMX19_03659	0.80	+0.4
1,097,430	-		MPMX19_03659	0.80	+1.7
1,097,430	-		MPMX19_03659	0.80	-1.9
1,097,430	-		MPMX19_03659	0.80	-0.5
1,097,430	-		MPMX19_03659	0.80	+0.9
1,097,448	-		MPMX19_03659	0.82	-0.8
1,097,448	-		MPMX19_03659	0.82	-1.2
1,097,570	+				+0.0
1,097,570	+				-0.5
1,097,570	+				+0.4
1,097,570	+				+0.8
1,097,570	+				-0.5
1,097,571	-				+1.1
1,097,571	-				-0.9
1,097,571	-				-2.3
1,097,571	-				+0.4
1,097,571	-				-0.5
1,097,588	+				-1.6
1,097,588	+				+0.7
1,097,588	+				+0.0
1,097,588	+				-1.3
1,097,589	-				+3.0
1,097,589	-				-0.9
1,097,589	-				-1.7
1,097,589	-				-2.5
1,097,589	-				+0.2
1,097,589	-				-0.1
1,097,590	+				-0.0
1,097,590	+				+0.3
1,097,590	+				-0.1
1,097,590	+				+0.1
1,097,590	+				-1.4
1,097,590	+				+0.1
1,097,590	+				+0.0
1,097,591	-				-1.1
1,097,591	-				+0.7
1,097,591	-				-0.3
1,097,591	-				+0.7
1,097,591	-				+0.9
1,097,591	-				-1.0
1,097,591	-				-0.5
1,097,591	-				+0.1
1,097,591	-				+0.0
1,097,591	-				+0.5
1,097,591	-				-0.3
1,097,591	-				-0.5
1,097,606	+				+0.7
1,097,607	-				-2.0
1,097,621	+				-0.3
1,097,621	+				-0.2
1,097,621	+				+0.1
1,097,621	+				-0.5
1,097,621	+				+0.1
1,097,622	-				-1.1
1,097,622	-				-0.5
1,097,826	+		MPMX19_03660	0.36	-1.3
1,097,826	+		MPMX19_03660	0.36	-0.4
1,097,826	+		MPMX19_03660	0.36	-0.0
1,097,827	-		MPMX19_03660	0.36	+0.7
1,097,827	-		MPMX19_03660	0.36	-1.5
1,097,827	-		MPMX19_03660	0.36	-0.3
1,097,827	-		MPMX19_03660	0.36	-2.5
1,097,970	+		MPMX19_03660	0.60	-1.2
1,097,970	+		MPMX19_03660	0.60	+0.1
1,097,970	+		MPMX19_03660	0.60	-1.5
1,097,970	+		MPMX19_03660	0.60	+0.1
1,097,970	+		MPMX19_03660	0.60	+0.1
1,097,970	+		MPMX19_03660	0.60	+0.8
1,097,970	+		MPMX19_03660	0.60	+0.4
1,097,970	+		MPMX19_03660	0.60	+1.2
1,097,970	+		MPMX19_03660	0.60	+0.7
1,097,970	+		MPMX19_03660	0.60	-1.5
1,097,970	+		MPMX19_03660	0.60	+0.7
1,097,970	+		MPMX19_03660	0.60	-0.4
1,097,970	+		MPMX19_03660	0.60	-0.3
1,097,970	+		MPMX19_03660	0.60	-1.1
1,097,970	+		MPMX19_03660	0.60	-0.9
1,097,970	+		MPMX19_03660	0.60	-1.0
1,097,970	+		MPMX19_03660	0.60	-3.1
1,097,970	+		MPMX19_03660	0.60	+0.1
1,097,971	-		MPMX19_03660	0.60	-0.0
1,097,971	-		MPMX19_03660	0.60	+0.7
1,097,971	-		MPMX19_03660	0.60	-0.8
1,097,971	-		MPMX19_03660	0.60	-1.4
1,097,971	-		MPMX19_03660	0.60	-0.9
1,097,971	-		MPMX19_03660	0.60	-0.5
1,097,971	-		MPMX19_03660	0.60	-2.0
1,097,971	-		MPMX19_03660	0.60	+1.0
1,097,971	-		MPMX19_03660	0.60	-0.9
1,097,971	-		MPMX19_03660	0.60	-0.0
1,097,971	-		MPMX19_03660	0.60	-0.9
1,097,971	-		MPMX19_03660	0.60	-0.0
1,097,971	-		MPMX19_03660	0.60	-0.5
1,097,971	-		MPMX19_03660	0.60	-1.3
1,097,971	-		MPMX19_03660	0.60	-0.9
1,097,971	-		MPMX19_03660	0.60	-0.3
1,097,971	-		MPMX19_03660	0.60	-1.3
1,097,971	-		MPMX19_03660	0.60	+0.8
1,098,027	+		MPMX19_03660	0.69	+0.5
1,098,027	+		MPMX19_03660	0.69	-0.6
1,098,027	+		MPMX19_03660	0.69	-0.6
1,098,027	+		MPMX19_03660	0.69	-1.8
1,098,028	-		MPMX19_03660	0.69	+1.5
1,098,028	-		MPMX19_03660	0.69	+0.5
1,098,533	+		MPMX19_03661	0.14	+0.4
1,098,533	+		MPMX19_03661	0.14	-0.8
1,098,534	-		MPMX19_03661	0.14	-1.4
1,098,534	-		MPMX19_03661	0.14	-0.8
1,098,534	-		MPMX19_03661	0.14	+0.7
1,098,534	-		MPMX19_03661	0.14	-1.1
1,098,534	-		MPMX19_03661	0.14	-0.5
1,098,534	-		MPMX19_03661	0.14	-0.3
1,098,551	+		MPMX19_03661	0.14	-0.6
1,098,551	+		MPMX19_03661	0.14	-0.4
1,098,552	-		MPMX19_03661	0.15	-1.5